RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 EMILIN3Q9NT22 766 aa14.24□□□□□ -0.13
SOX2-OT-219ENST00000593330 ONECUT3O60422 494 aaPredicted RBP14.23□□□□□ -0.13
SOX2-OT-219ENST00000593330 NYAP1Q6ZVC0 841 aa14.23□□□□□ -0.13
SOX2-OT-219ENST00000593330 A0A0G2JS52 829 aa14.19□□□□□ -0.14
SOX2-OT-219ENST00000593330 CAMK2BQ13554 666 aa14.16□□□□□ -0.14
SOX2-OT-219ENST00000593330 PROX2Q3B8N5 592 aa14.13□□□□□ -0.15
SOX2-OT-219ENST00000593330 SOWAHBA6NEL2 793 aa14.12□□□□□ -0.15
SOX2-OT-219ENST00000593330 COL9A1P20849 921 aa14.12□□□□□ -0.15
SOX2-OT-219ENST00000593330 IRX2Q9BZI1 471 aaPredicted RBP14.12□□□□□ -0.15
SOX2-OT-219ENST00000593330 C6orf132Q5T0Z8 1188 aa14.11□□□□□ -0.15
SOX2-OT-219ENST00000593330 CADPS2Q86UW7 1296 aa14.11□□□□□ -0.15
SOX2-OT-219ENST00000593330 KIAA1468Q9P260 1216 aa14.11□□□□□ -0.15
SOX2-OT-219ENST00000593330 ITGBL1O95965 494 aaPredicted RBP14.1□□□□□ -0.15
SOX2-OT-219ENST00000593330 ZFRQ96KR1 1074 aaKnown RBP14.09□□□□□ -0.15
SOX2-OT-219ENST00000593330 DPYSL4O14531 572 aa14.08□□□□□ -0.16
SOX2-OT-219ENST00000593330 TRIM6-TRIM34B2RNG4 842 aa14.06□□□□□ -0.16
SOX2-OT-219ENST00000593330 FAM98CQ17RN3 349 aaKnown RBP14.06□□□□□ -0.16
SOX2-OT-219ENST00000593330 BBXQ8WY36 941 aaPredicted RBP14.06□□□□□ -0.16
SOX2-OT-219ENST00000593330 BCAMP50895 628 aa14.04□□□□□ -0.16
SOX2-OT-219ENST00000593330 SPDYE16A6NNV3 312 aaPredicted RBP14.03□□□□□ -0.16
SOX2-OT-219ENST00000593330 PACS2Q86VP3 889 aa14.03□□□□□ -0.16
SOX2-OT-219ENST00000593330 LRCH3Q96II8 777 aa14.02□□□□□ -0.17
SOX2-OT-219ENST00000593330 KCNC4Q03721 635 aa14.01□□□□□ -0.17
SOX2-OT-219ENST00000593330 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.01□□□□□ -0.17
SOX2-OT-219ENST00000593330 TSR3Q9UJK0 312 aaKnown RBP14□□□□□ -0.17
SOX2-OT-219ENST00000593330 DDX12PQ92771 950 aa13.99□□□□□ -0.17
SOX2-OT-219ENST00000593330 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-219ENST00000593330 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
SOX2-OT-219ENST00000593330 SEPT9Q9UHD8 586 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-219ENST00000593330 MAP3K7O43318 606 aa13.97□□□□□ -0.17
SOX2-OT-219ENST00000593330 EN1Q05925 392 aaPredicted RBP13.97□□□□□ -0.17
SOX2-OT-219ENST00000593330 PDIA6Q15084 440 aa13.97□□□□□ -0.17
SOX2-OT-219ENST00000593330 NBR1Q14596 966 aa13.96□□□□□ -0.17
SOX2-OT-219ENST00000593330 WBP1LQ9NX94 342 aa13.96□□□□□ -0.17
SOX2-OT-219ENST00000593330 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.96□□□□□ -0.17
SOX2-OT-219ENST00000593330 SPRYD3Q8NCJ5 442 aa13.93□□□□□ -0.18
SOX2-OT-219ENST00000593330 HPS5Q9UPZ3 1129 aa13.93□□□□□ -0.18
SOX2-OT-219ENST00000593330 PPP4CP60510 307 aa13.89□□□□□ -0.19
SOX2-OT-219ENST00000593330 WDR70Q9NW82 654 aa13.89□□□□□ -0.19
SOX2-OT-219ENST00000593330 E2F4Q16254 413 aa13.88□□□□□ -0.19
SOX2-OT-219ENST00000593330 LAPTM4AQ15012 233 aa13.87□□□□□ -0.19
SOX2-OT-219ENST00000593330 HDGFP51858 240 aaKnown RBP13.86□□□□□ -0.19
SOX2-OT-219ENST00000593330 ARIH1Q9Y4X5 557 aaPredicted RBP13.86□□□□□ -0.19
SOX2-OT-219ENST00000593330 NBPF26B4DH59 902 aa13.85□□□□□ -0.19
SOX2-OT-219ENST00000593330 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
SOX2-OT-219ENST00000593330 PRSS12P56730 875 aa13.84□□□□□ -0.19
SOX2-OT-219ENST00000593330 CDCA7LQ96GN5 454 aa13.84□□□□□ -0.19
SOX2-OT-219ENST00000593330 TSKSQ9UJT2 592 aa13.84□□□□□ -0.19
SOX2-OT-219ENST00000593330 TSR1Q2NL82 804 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-219ENST00000593330 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
SOX2-OT-219ENST00000593330 Q6ZNB5 142 aa13.78□□□□□ -0.2
SOX2-OT-219ENST00000593330 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
SOX2-OT-219ENST00000593330 SLC4A3P48751 1232 aa13.76□□□□□ -0.21
SOX2-OT-219ENST00000593330 SAMD7Q7Z3H4 446 aa13.76□□□□□ -0.21
SOX2-OT-219ENST00000593330 TATDN2Q93075 761 aa13.75□□□□□ -0.21
SOX2-OT-219ENST00000593330 IL21Q9HBE4 155 aa13.74□□□□□ -0.21
SOX2-OT-219ENST00000593330 PNMA3Q9UL41 463 aa13.74□□□□□ -0.21
SOX2-OT-219ENST00000593330 AMER1Q5JTC6 1135 aaPredicted RBP13.73□□□□□ -0.21
SOX2-OT-219ENST00000593330 TJAP1Q5JTD0 557 aa13.7□□□□□ -0.22
SOX2-OT-219ENST00000593330 SMAPO00193 183 aa13.69□□□□□ -0.22
SOX2-OT-219ENST00000593330 MTRQ99707 1265 aa13.67□□□□□ -0.22
SOX2-OT-219ENST00000593330 RNF40O75150 1001 aa13.66□□□□□ -0.22
SOX2-OT-219ENST00000593330 OSBPP22059 807 aa13.66□□□□□ -0.22
SOX2-OT-219ENST00000593330 GGCXP38435 758 aa13.66□□□□□ -0.22
SOX2-OT-219ENST00000593330 NUDT18Q6ZVK8 323 aa13.66□□□□□ -0.22
SOX2-OT-219ENST00000593330 PAXIP1Q6ZW49 1069 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-219ENST00000593330 SLF2Q8IX21 1173 aa13.66□□□□□ -0.22
SOX2-OT-219ENST00000593330 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
SOX2-OT-219ENST00000593330 PRR14Q9BWN1 585 aa13.65□□□□□ -0.22
SOX2-OT-219ENST00000593330 V9GY48 417 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-219ENST00000593330 FAM198AQ9UFP1 575 aa13.64□□□□□ -0.23
SOX2-OT-219ENST00000593330 GFRA3O60609 400 aa13.62□□□□□ -0.23
SOX2-OT-219ENST00000593330 PRKD2Q9BZL6 878 aa13.61□□□□□ -0.23
SOX2-OT-219ENST00000593330 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
SOX2-OT-219ENST00000593330 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.59□□□□□ -0.23
SOX2-OT-219ENST00000593330 NRG2O14511 850 aaPredicted RBP13.58□□□□□ -0.24
SOX2-OT-219ENST00000593330 PPP1R18Q6NYC8 613 aa13.58□□□□□ -0.24
SOX2-OT-219ENST00000593330 TTC13Q8NBP0 860 aa13.58□□□□□ -0.24
SOX2-OT-219ENST00000593330 CDHR5Q9HBB8 845 aa13.57□□□□□ -0.24
SOX2-OT-219ENST00000593330 TRAF7Q6Q0C0 670 aa13.56□□□□□ -0.24
SOX2-OT-219ENST00000593330 TMUB1Q9BVT8 246 aa13.55□□□□□ -0.24
SOX2-OT-219ENST00000593330 APLP1P51693 650 aa13.54□□□□□ -0.24
SOX2-OT-219ENST00000593330 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
SOX2-OT-219ENST00000593330 SWT1Q5T5J6 900 aaKnown RBP13.53□□□□□ -0.24
SOX2-OT-219ENST00000593330 C3orf80F5H4A9 247 aa13.52□□□□□ -0.25
SOX2-OT-219ENST00000593330 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-219ENST00000593330 ZNF516Q92618 1163 aa13.49□□□□□ -0.25
SOX2-OT-219ENST00000593330 NPDC1Q9NQX5 325 aaPredicted RBP13.49□□□□□ -0.25
SOX2-OT-219ENST00000593330 COPS2P61201 443 aa13.46□□□□□ -0.25
SOX2-OT-219ENST00000593330 RBM46Q8TBY0 533 aaKnown RBP13.46□□□□□ -0.25
SOX2-OT-219ENST00000593330 EYA1Q99502 592 aa13.46□□□□□ -0.25
SOX2-OT-219ENST00000593330 ZPR1O75312 459 aa13.45□□□□□ -0.26
SOX2-OT-219ENST00000593330 PDZRN3Q9UPQ7 1066 aa13.45□□□□□ -0.26
SOX2-OT-219ENST00000593330 PCDHB3Q9Y5E6 796 aa13.45□□□□□ -0.26
SOX2-OT-219ENST00000593330 DNAJB2P25686 324 aa13.44□□□□□ -0.26
SOX2-OT-219ENST00000593330 KMT5BQ4FZB7 885 aa13.41□□□□□ -0.26
SOX2-OT-219ENST00000593330 NKX2-3Q8TAU0 364 aa13.4□□□□□ -0.26
SOX2-OT-219ENST00000593330 PTGDRQ13258 359 aa13.38□□□□□ -0.27
SOX2-OT-219ENST00000593330 RTN4Q9NQC3 1192 aaKnown RBP13.37□□□□□ -0.27
SOX2-OT-219ENST00000593330 P3H3Q8IVL6 736 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms