RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 C3P01024 1663 aa16.21■□□□□ 0.19
TUBD1-215ENST00000593110 NUBP1P53384 320 aa16.21■□□□□ 0.19
TUBD1-215ENST00000593110 MYO5CQ9NQX4 1742 aa16.2■□□□□ 0.18
TUBD1-215ENST00000593110 ZNF518AQ6AHZ1 1483 aa16.19■□□□□ 0.18
TUBD1-215ENST00000593110 ABCA6Q8N139 1617 aa16.19■□□□□ 0.18
TUBD1-215ENST00000593110 RASEFQ8IZ41 740 aa16.18■□□□□ 0.18
TUBD1-215ENST00000593110 KIF14Q15058 1648 aa16.17■□□□□ 0.18
TUBD1-215ENST00000593110 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
TUBD1-215ENST00000593110 NCOA1Q15788 1441 aa16.17■□□□□ 0.18
TUBD1-215ENST00000593110 TSPYL2Q9H2G4 693 aaPredicted RBP16.16■□□□□ 0.18
TUBD1-215ENST00000593110 AGLP35573 1532 aa16.14■□□□□ 0.18
TUBD1-215ENST00000593110 ZRANB1Q9UGI0 708 aa16.12■□□□□ 0.17
TUBD1-215ENST00000593110 MLH3Q9UHC1 1453 aa16.11■□□□□ 0.17
TUBD1-215ENST00000593110 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
TUBD1-215ENST00000593110 DCAF8Q5TAQ9 597 aa16.11■□□□□ 0.17
TUBD1-215ENST00000593110 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
TUBD1-215ENST00000593110 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
TUBD1-215ENST00000593110 EEA1Q15075 1411 aa16.09■□□□□ 0.17
TUBD1-215ENST00000593110 ARHGAP5Q13017 1502 aa16.09■□□□□ 0.17
TUBD1-215ENST00000593110 CDC42BPBQ9Y5S2 1711 aa16.08■□□□□ 0.17
TUBD1-215ENST00000593110 GSE1Q14687 1217 aa16.08■□□□□ 0.16
TUBD1-215ENST00000593110 AFAP1Q8N556 730 aa16.08■□□□□ 0.16
TUBD1-215ENST00000593110 ABCC1P33527 1531 aa16.08■□□□□ 0.16
TUBD1-215ENST00000593110 CIZ1Q9ULV3 898 aaPredicted RBP16.07■□□□□ 0.16
TUBD1-215ENST00000593110 CAMSAP1Q5T5Y3 1602 aa16.07■□□□□ 0.16
TUBD1-215ENST00000593110 LRRIQ1Q96JM4 1722 aa16.06■□□□□ 0.16
TUBD1-215ENST00000593110 MROH2AA6NES4 1674 aa16.06■□□□□ 0.16
TUBD1-215ENST00000593110 TROQ12816 1431 aaPredicted RBP16.06■□□□□ 0.16
TUBD1-215ENST00000593110 KIDINS220Q9ULH0 1771 aa16.05■□□□□ 0.16
TUBD1-215ENST00000593110 ITSN2Q9NZM3 1697 aa16.05■□□□□ 0.16
TUBD1-215ENST00000593110 ZNF142P52746 1687 aaPredicted RBP16.05■□□□□ 0.16
TUBD1-215ENST00000593110 PREX2Q70Z35 1606 aa16.05■□□□□ 0.16
TUBD1-215ENST00000593110 NPATQ14207 1427 aa16.04■□□□□ 0.16
TUBD1-215ENST00000593110 CNTLNQ9NXG0 1405 aa16.04■□□□□ 0.16
TUBD1-215ENST00000593110 EVX2Q03828 476 aa16.04■□□□□ 0.16
TUBD1-215ENST00000593110 FMN1Q68DA7 1419 aa16.02■□□□□ 0.15
TUBD1-215ENST00000593110 ZNF335Q9H4Z2 1342 aaPredicted RBP16.01■□□□□ 0.15
TUBD1-215ENST00000593110 PLA2R1Q13018 1463 aa16.01■□□□□ 0.15
TUBD1-215ENST00000593110 TCOF1Q13428 1488 aaKnown RBP16.01■□□□□ 0.15
TUBD1-215ENST00000593110 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
TUBD1-215ENST00000593110 MYO3AQ8NEV4 1616 aa16.01■□□□□ 0.15
TUBD1-215ENST00000593110 MED1Q15648 1581 aaPredicted RBP16■□□□□ 0.15
TUBD1-215ENST00000593110 ZNF579Q8NAF0 562 aaKnown RBP15.99■□□□□ 0.15
TUBD1-215ENST00000593110 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
TUBD1-215ENST00000593110 PLXNC1O60486 1568 aa15.96■□□□□ 0.15
TUBD1-215ENST00000593110 SAMD9LQ8IVG5 1584 aa15.96■□□□□ 0.15
TUBD1-215ENST00000593110 CEP170BQ9Y4F5 1589 aaPredicted RBP15.96■□□□□ 0.15
TUBD1-215ENST00000593110 CLIP1P30622 1438 aa15.96■□□□□ 0.15
TUBD1-215ENST00000593110 UBAP1LF5GYI3 381 aa15.95■□□□□ 0.14
TUBD1-215ENST00000593110 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
TUBD1-215ENST00000593110 CDC42BPAQ5VT25 1732 aa15.94■□□□□ 0.14
TUBD1-215ENST00000593110 PHF12Q96QT6 1004 aa15.94■□□□□ 0.14
TUBD1-215ENST00000593110 CDK11AQ9UQ88 783 aaPredicted RBP15.94■□□□□ 0.14
TUBD1-215ENST00000593110 CLTCQ00610 1675 aaKnown RBP15.93■□□□□ 0.14
TUBD1-215ENST00000593110 ZMYM3Q14202 1370 aa15.93■□□□□ 0.14
TUBD1-215ENST00000593110 PTPRKQ15262 1439 aa15.93■□□□□ 0.14
TUBD1-215ENST00000593110 SP7Q8TDD2 431 aaPredicted RBP15.91■□□□□ 0.14
TUBD1-215ENST00000593110 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
TUBD1-215ENST00000593110 MYT1LQ9UL68 1186 aa15.91■□□□□ 0.14
TUBD1-215ENST00000593110 INO80Q9ULG1 1556 aaPredicted RBP15.91■□□□□ 0.14
TUBD1-215ENST00000593110 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
TUBD1-215ENST00000593110 SYCP2Q9BX26 1530 aa15.9■□□□□ 0.14
TUBD1-215ENST00000593110 PYGBP11216 843 aa15.9■□□□□ 0.14
TUBD1-215ENST00000593110 ALKQ9UM73 1620 aa15.9■□□□□ 0.14
TUBD1-215ENST00000593110 NEURL4Q96JN8 1562 aa15.89■□□□□ 0.13
TUBD1-215ENST00000593110 PKD2Q13563 968 aa15.89■□□□□ 0.13
TUBD1-215ENST00000593110 ATP1B4Q9UN42 357 aaPredicted RBP15.87■□□□□ 0.13
TUBD1-215ENST00000593110 ATP7AQ04656 1500 aa15.87■□□□□ 0.13
TUBD1-215ENST00000593110 DNMT1P26358 1616 aaKnown RBP15.86■□□□□ 0.13
TUBD1-215ENST00000593110 HSPA1LP34931 641 aa15.86■□□□□ 0.13
TUBD1-215ENST00000593110 CLCN6P51797 869 aa15.86■□□□□ 0.13
TUBD1-215ENST00000593110 CCDC18Q5T9S5 1454 aa15.85■□□□□ 0.13
TUBD1-215ENST00000593110 AMER1Q5JTC6 1135 aaPredicted RBP15.85■□□□□ 0.13
TUBD1-215ENST00000593110 POLR1AO95602 1720 aaPredicted RBP15.85■□□□□ 0.13
TUBD1-215ENST00000593110 A2ML1A8K2U0 1454 aa15.84■□□□□ 0.13
TUBD1-215ENST00000593110 CPS1P31327 1500 aa15.84■□□□□ 0.13
TUBD1-215ENST00000593110 KIF12Q96FN5 646 aa15.84■□□□□ 0.13
TUBD1-215ENST00000593110 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.12
TUBD1-215ENST00000593110 A2MP01023 1474 aa15.83■□□□□ 0.12
TUBD1-215ENST00000593110 ECM2O94769 699 aaPredicted RBP15.82■□□□□ 0.12
TUBD1-215ENST00000593110 VWDEQ8N2E2 1590 aa15.82■□□□□ 0.12
TUBD1-215ENST00000593110 GPATCH8Q9UKJ3 1502 aaKnown RBP15.81■□□□□ 0.12
TUBD1-215ENST00000593110 SHANK2Q9UPX8 1470 aa15.8■□□□□ 0.12
TUBD1-215ENST00000593110 MAP3K13O43283 966 aa15.8■□□□□ 0.12
TUBD1-215ENST00000593110 CHRM1P11229 460 aaPredicted RBP15.8■□□□□ 0.12
TUBD1-215ENST00000593110 KIAA1107Q9UPP5 1409 aa15.79■□□□□ 0.12
TUBD1-215ENST00000593110 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
TUBD1-215ENST00000593110 PCDHB13Q9Y5F0 798 aa15.79■□□□□ 0.12
TUBD1-215ENST00000593110 GABBR2O75899 941 aa15.78■□□□□ 0.12
TUBD1-215ENST00000593110 ADGBQ8N7X0 1667 aa15.78■□□□□ 0.12
TUBD1-215ENST00000593110 SGIP1Q9BQI5 828 aa15.76■□□□□ 0.11
TUBD1-215ENST00000593110 UBTFP17480 764 aaKnown RBP15.75■□□□□ 0.11
TUBD1-215ENST00000593110 PIP4K2BP78356 416 aa15.75■□□□□ 0.11
TUBD1-215ENST00000593110 MS4A3Q96HJ5 214 aa15.75■□□□□ 0.11
TUBD1-215ENST00000593110 PLEKHH2Q8IVE3 1493 aa15.75■□□□□ 0.11
TUBD1-215ENST00000593110 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
TUBD1-215ENST00000593110 TOM1O60784 492 aa15.74■□□□□ 0.11
TUBD1-215ENST00000593110 HNRNPMP52272 730 aaKnown RBP eCLIP15.74■□□□□ 0.11
TUBD1-215ENST00000593110 GALR2O43603 387 aaPredicted RBP15.73■□□□□ 0.11
TUBD1-215ENST00000593110 RTN4Q9NQC3 1192 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms