RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 IPO9Q96P70 1041 aaKnown RBP19.93■□□□□ 0.78
SMARCA4-219ENST00000592604 ANP32AP39687 249 aaKnown RBP19.92■□□□□ 0.78
SMARCA4-219ENST00000592604 SYNJ2O15056 1496 aa19.91■□□□□ 0.78
SMARCA4-219ENST00000592604 DEKP35659 375 aaKnown RBP19.91■□□□□ 0.78
SMARCA4-219ENST00000592604 PLEKHD1A6NEE1 506 aa19.9■□□□□ 0.78
SMARCA4-219ENST00000592604 ABCA8O94911 1581 aa19.89■□□□□ 0.77
SMARCA4-219ENST00000592604 TSPY4P0CV99 314 aa19.89■□□□□ 0.77
SMARCA4-219ENST00000592604 TSPY10P0CW01 314 aa19.89■□□□□ 0.77
SMARCA4-219ENST00000592604 RRP1P56182 461 aaKnown RBP19.89■□□□□ 0.77
SMARCA4-219ENST00000592604 ARHGEF5Q12774 1597 aa19.88■□□□□ 0.77
SMARCA4-219ENST00000592604 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
SMARCA4-219ENST00000592604 DCAF11Q8TEB1 546 aa19.88■□□□□ 0.77
SMARCA4-219ENST00000592604 JPH4Q96JJ6 628 aa19.87■□□□□ 0.77
SMARCA4-219ENST00000592604 KDM2AQ9Y2K7 1162 aa19.87■□□□□ 0.77
SMARCA4-219ENST00000592604 NUP160Q12769 1436 aa19.87■□□□□ 0.77
SMARCA4-219ENST00000592604 PARD3Q8TEW0 1356 aa19.86■□□□□ 0.77
SMARCA4-219ENST00000592604 ATP10BO94823 1461 aa19.86■□□□□ 0.77
SMARCA4-219ENST00000592604 PDE3BQ13370 1112 aa19.86■□□□□ 0.77
SMARCA4-219ENST00000592604 SENP3-EIF4A1A0A087X0R7 540 aa19.86■□□□□ 0.77
SMARCA4-219ENST00000592604 PLEKHG5O94827 1062 aa19.86■□□□□ 0.77
SMARCA4-219ENST00000592604 NLRP13Q86W25 1043 aa19.85■□□□□ 0.77
SMARCA4-219ENST00000592604 TRPM1Q7Z4N2 1603 aa19.84■□□□□ 0.77
SMARCA4-219ENST00000592604 RCAN3Q9UKA8 241 aa19.83■□□□□ 0.77
SMARCA4-219ENST00000592604 ZBTB47Q9UFB7 747 aaPredicted RBP19.83■□□□□ 0.76
SMARCA4-219ENST00000592604 PRAG1Q86YV5 1406 aa19.82■□□□□ 0.76
SMARCA4-219ENST00000592604 UBE2Q2Q8WVN8 375 aa19.82■□□□□ 0.76
SMARCA4-219ENST00000592604 TCERG1O14776 1098 aaKnown RBP19.82■□□□□ 0.76
SMARCA4-219ENST00000592604 INSRP06213 1382 aa19.81■□□□□ 0.76
SMARCA4-219ENST00000592604 FAM135AQ9P2D6 1515 aa19.81■□□□□ 0.76
SMARCA4-219ENST00000592604 PER1O15534 1290 aaPredicted RBP19.81■□□□□ 0.76
SMARCA4-219ENST00000592604 EXOC6Q8TAG9 804 aa19.81■□□□□ 0.76
SMARCA4-219ENST00000592604 NBR1Q14596 966 aa19.8■□□□□ 0.76
SMARCA4-219ENST00000592604 GPRASP1Q5JY77 1395 aa19.8■□□□□ 0.76
SMARCA4-219ENST00000592604 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
SMARCA4-219ENST00000592604 ZMYM4Q5VZL5 1548 aa19.79■□□□□ 0.76
SMARCA4-219ENST00000592604 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.765e-6■■□□□ 11.8
SMARCA4-219ENST00000592604 LAMC1P11047 1609 aa19.78■□□□□ 0.76
SMARCA4-219ENST00000592604 CCDC141Q6ZP82 1450 aa19.77■□□□□ 0.76
SMARCA4-219ENST00000592604 RSPH4AQ5TD94 716 aa19.76■□□□□ 0.75
SMARCA4-219ENST00000592604 CCDC144AA2RUR9 1427 aa19.75■□□□□ 0.75
SMARCA4-219ENST00000592604 MS4A1P11836 297 aa19.75■□□□□ 0.75
SMARCA4-219ENST00000592604 COL17A1Q9UMD9 1497 aaPredicted RBP19.75■□□□□ 0.75
SMARCA4-219ENST00000592604 SAMD9LQ8IVG5 1584 aa19.74■□□□□ 0.75
SMARCA4-219ENST00000592604 CDC42BPBQ9Y5S2 1711 aa19.73■□□□□ 0.75
SMARCA4-219ENST00000592604 FBLN2P98095 1184 aa19.73■□□□□ 0.75
SMARCA4-219ENST00000592604 PRDM15P57071 1507 aaPredicted RBP19.73■□□□□ 0.75
SMARCA4-219ENST00000592604 BLMP54132 1417 aaPredicted RBP19.73■□□□□ 0.75
SMARCA4-219ENST00000592604 PLA2R1Q13018 1463 aa19.72■□□□□ 0.75
SMARCA4-219ENST00000592604 PREX2Q70Z35 1606 aa19.72■□□□□ 0.75
SMARCA4-219ENST00000592604 PDE4AP27815 886 aa19.72■□□□□ 0.75
SMARCA4-219ENST00000592604 UNC13BO14795 1591 aa19.72■□□□□ 0.75
SMARCA4-219ENST00000592604 NBPF1Q3BBV0 1214 aa19.72■□□□□ 0.75
SMARCA4-219ENST00000592604 BACH2Q9BYV9 841 aa19.71■□□□□ 0.75
SMARCA4-219ENST00000592604 A2MP01023 1474 aa19.71■□□□□ 0.75
SMARCA4-219ENST00000592604 TESK2Q96S53 571 aa19.71■□□□□ 0.75
SMARCA4-219ENST00000592604 SALL2Q9Y467 1007 aaPredicted RBP19.7■□□□□ 0.74
SMARCA4-219ENST00000592604 RTL5Q5HYW3 569 aaPredicted RBP19.7■□□□□ 0.74
SMARCA4-219ENST00000592604 MAST1Q9Y2H9 1570 aa19.7■□□□□ 0.74
SMARCA4-219ENST00000592604 CDCA7LQ96GN5 454 aa19.69■□□□□ 0.74
SMARCA4-219ENST00000592604 PLEKHH2Q8IVE3 1493 aa19.68■□□□□ 0.74
SMARCA4-219ENST00000592604 EIF2AK4Q9P2K8 1649 aaKnown RBP19.67■□□□□ 0.74
SMARCA4-219ENST00000592604 DISP3Q9P2K9 1392 aa19.67■□□□□ 0.74
SMARCA4-219ENST00000592604 MYO5CQ9NQX4 1742 aa19.65■□□□□ 0.74
SMARCA4-219ENST00000592604 ERBINQ96RT1 1412 aa19.65■□□□□ 0.74
SMARCA4-219ENST00000592604 RGL3Q3MIN7 710 aa19.65■□□□□ 0.74
SMARCA4-219ENST00000592604 IQGAP3Q86VI3 1631 aa19.65■□□□□ 0.74
SMARCA4-219ENST00000592604 ATP10AO60312 1499 aa19.64■□□□□ 0.73
SMARCA4-219ENST00000592604 PANK3Q9H999 370 aa19.64■□□□□ 0.73
SMARCA4-219ENST00000592604 ERCC6Q03468 1493 aa19.64■□□□□ 0.73
SMARCA4-219ENST00000592604 CC2D1BQ5T0F9 858 aaKnown RBP19.63■□□□□ 0.73
SMARCA4-219ENST00000592604 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
SMARCA4-219ENST00000592604 PLXNC1O60486 1568 aa19.62■□□□□ 0.73
SMARCA4-219ENST00000592604 TMF1P82094 1093 aa19.62■□□□□ 0.73
SMARCA4-219ENST00000592604 SYCP2Q9BX26 1530 aa19.61■□□□□ 0.73
SMARCA4-219ENST00000592604 USP35Q9P2H5 1018 aa19.6■□□□□ 0.73
SMARCA4-219ENST00000592604 PLIN1O60240 522 aa19.59■□□□□ 0.73
SMARCA4-219ENST00000592604 CRBNQ96SW2 442 aa19.59■□□□□ 0.73
SMARCA4-219ENST00000592604 RNF17Q9BXT8 1623 aaKnown RBP19.59■□□□□ 0.73
SMARCA4-219ENST00000592604 MAGI2Q86UL8 1455 aa19.57■□□□□ 0.72
SMARCA4-219ENST00000592604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.55■□□□□ 0.722e-8■■■□□ 18.1
SMARCA4-219ENST00000592604 ARHGAP5Q13017 1502 aa19.55■□□□□ 0.72
SMARCA4-219ENST00000592604 TTC37Q6PGP7 1564 aa19.55■□□□□ 0.72
SMARCA4-219ENST00000592604 DUOX2Q9NRD8 1548 aa19.55■□□□□ 0.72
SMARCA4-219ENST00000592604 PPM1GO15355 546 aaPredicted RBP19.54■□□□□ 0.72
SMARCA4-219ENST00000592604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.54■□□□□ 0.724e-7■■□□□ 14.3
SMARCA4-219ENST00000592604 ADAMTS8Q9UP79 889 aa19.54■□□□□ 0.72
SMARCA4-219ENST00000592604 WDR7Q9Y4E6 1490 aa19.54■□□□□ 0.72
SMARCA4-219ENST00000592604 KDM2BQ8NHM5 1336 aa19.53■□□□□ 0.72
SMARCA4-219ENST00000592604 DDRGK1Q96HY6 314 aa19.52■□□□□ 0.72
SMARCA4-219ENST00000592604 NEFMP07197 916 aa19.51■□□□□ 0.71
SMARCA4-219ENST00000592604 ZNF521Q96K83 1311 aa19.5■□□□□ 0.71
SMARCA4-219ENST00000592604 DUSP27Q5VZP5 1158 aa19.5■□□□□ 0.71
SMARCA4-219ENST00000592604 LAS1LQ9Y4W2 734 aaKnown RBP19.5■□□□□ 0.71
SMARCA4-219ENST00000592604 IQGAP1P46940 1657 aa19.5■□□□□ 0.71
SMARCA4-219ENST00000592604 PPP2R1AP30153 589 aa19.49■□□□□ 0.71
SMARCA4-219ENST00000592604 C20orf194Q5TEA3 1177 aa19.49■□□□□ 0.71
SMARCA4-219ENST00000592604 PODXL2Q9NZ53 605 aa19.49■□□□□ 0.71
SMARCA4-219ENST00000592604 PLEKHH1Q9ULM0 1364 aa19.49■□□□□ 0.71
SMARCA4-219ENST00000592604 CLASP1Q7Z460 1538 aa19.48■□□□□ 0.71
SMARCA4-219ENST00000592604 CENPQQ7L2Z9 268 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms