RNA–Protein interactions for RNA: ENST00000591416.5

MBD1-224, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-224ENST00000591416 EVC2Q86UK5 1308 aa20.22■□□□□ 0.83
MBD1-224ENST00000591416 PANK3Q9H999 370 aa20.21■□□□□ 0.83
MBD1-224ENST00000591416 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
MBD1-224ENST00000591416 CHMP4BQ9H444 224 aaKnown RBP20.19■□□□□ 0.82
MBD1-224ENST00000591416 PPP4R2Q9NY27 417 aa20.19■□□□□ 0.82
MBD1-224ENST00000591416 ARHGEF11O15085 1522 aa20.18■□□□□ 0.82
MBD1-224ENST00000591416 NUTM2FA1L443 756 aa20.17■□□□□ 0.82
MBD1-224ENST00000591416 RTF1Q92541 710 aaKnown RBP20.17■□□□□ 0.82
MBD1-224ENST00000591416 RAPGEF3O95398 923 aa20.17■□□□□ 0.82
MBD1-224ENST00000591416 ARXQ96QS3 562 aa20.16■□□□□ 0.82
MBD1-224ENST00000591416 KIAA1107Q9UPP5 1409 aa20.15■□□□□ 0.82
MBD1-224ENST00000591416 MINK1Q8N4C8 1332 aaPredicted RBP20.15■□□□□ 0.82
MBD1-224ENST00000591416 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
MBD1-224ENST00000591416 MYBBP1AQ9BQG0 1328 aaKnown RBP20.14■□□□□ 0.81
MBD1-224ENST00000591416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.13■□□□□ 0.81
MBD1-224ENST00000591416 CENPJQ9HC77 1338 aaPredicted RBP20.13■□□□□ 0.81
MBD1-224ENST00000591416 CALD1Q05682 793 aaKnown RBP20.13■□□□□ 0.81
MBD1-224ENST00000591416 PRKRIP1Q9H875 184 aaPredicted RBP20.13■□□□□ 0.81
MBD1-224ENST00000591416 CCDC141Q6ZP82 1450 aa20.12■□□□□ 0.81
MBD1-224ENST00000591416 NAIPQ13075 1403 aa20.11■□□□□ 0.81
MBD1-224ENST00000591416 CGNL1Q0VF96 1302 aa20.11■□□□□ 0.81
MBD1-224ENST00000591416 CD109Q6YHK3 1445 aa20.1■□□□□ 0.81
MBD1-224ENST00000591416 CSB-PGBD3P0DP91 1061 aa20.09■□□□□ 0.81
MBD1-224ENST00000591416 KIF14Q15058 1648 aa20.09■□□□□ 0.81
MBD1-224ENST00000591416 CAMSAP2Q08AD1 1489 aa20.07■□□□□ 0.8
MBD1-224ENST00000591416 AMPHP49418 695 aa20.06■□□□□ 0.8
MBD1-224ENST00000591416 SLC52A1Q9NWF4 448 aa20.06■□□□□ 0.8
MBD1-224ENST00000591416 CCDC7Q96M83 1385 aa20.05■□□□□ 0.8
MBD1-224ENST00000591416 KIF7Q2M1P5 1343 aa20.05■□□□□ 0.8
MBD1-224ENST00000591416 CFAP70Q5T0N1 1121 aa20.04■□□□□ 0.8
MBD1-224ENST00000591416 PTPN23Q9H3S7 1636 aa20.04■□□□□ 0.8
MBD1-224ENST00000591416 ABCC5O15440 1437 aa20.04■□□□□ 0.8
MBD1-224ENST00000591416 RCAN3Q9UKA8 241 aa20.04■□□□□ 0.8
MBD1-224ENST00000591416 COG3Q96JB2 828 aa20.04■□□□□ 0.8
MBD1-224ENST00000591416 GOLGA2Q08379 1002 aa20.03■□□□□ 0.8
MBD1-224ENST00000591416 PDE3BQ13370 1112 aa20.03■□□□□ 0.8
MBD1-224ENST00000591416 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
MBD1-224ENST00000591416 TMEM132EQ6IEE7 984 aa20.03■□□□□ 0.8
MBD1-224ENST00000591416 IPO8O15397 1037 aaKnown RBP20.02■□□□□ 0.8
MBD1-224ENST00000591416 CCDC146Q8IYE0 955 aa20.01■□□□□ 0.79
MBD1-224ENST00000591416 B4GALNT3Q6L9W6 998 aa20.01■□□□□ 0.79
MBD1-224ENST00000591416 ADAMTS12P58397 1594 aa20■□□□□ 0.79
MBD1-224ENST00000591416 ADGRL1O94910 1474 aa20■□□□□ 0.79
MBD1-224ENST00000591416 RGS3P49796 1198 aa19.99■□□□□ 0.79
MBD1-224ENST00000591416 LMOD3Q0VAK6 560 aa19.99■□□□□ 0.79
MBD1-224ENST00000591416 THOC2Q8NI27 1593 aaKnown RBP19.98■□□□□ 0.79
MBD1-224ENST00000591416 AKNAQ7Z591 1439 aa19.98■□□□□ 0.79
MBD1-224ENST00000591416 CHMP4AQ9BY43 222 aa19.98■□□□□ 0.79
MBD1-224ENST00000591416 WDR62O43379 1518 aa19.98■□□□□ 0.79
MBD1-224ENST00000591416 EIF5BO60841 1220 aaKnown RBP19.97■□□□□ 0.79
MBD1-224ENST00000591416 TXNDC2Q86VQ3 553 aa19.96■□□□□ 0.79
MBD1-224ENST00000591416 NBPF8Q3BBV2 869 aa19.96■□□□□ 0.79
MBD1-224ENST00000591416 ERICH6BQ5W0A0 696 aa19.96■□□□□ 0.79
MBD1-224ENST00000591416 NBPF1Q3BBV0 1214 aa19.96■□□□□ 0.79
MBD1-224ENST00000591416 NCOA1Q15788 1441 aa19.96■□□□□ 0.79
MBD1-224ENST00000591416 LTV1Q96GA3 475 aaPredicted RBP19.95■□□□□ 0.78
MBD1-224ENST00000591416 UGGT2Q9NYU1 1516 aa19.95■□□□□ 0.78
MBD1-224ENST00000591416 CASC1Q6TDU7 716 aa19.95■□□□□ 0.78
MBD1-224ENST00000591416 RAPGEF6Q8TEU7 1601 aa19.95■□□□□ 0.78
MBD1-224ENST00000591416 POGZQ7Z3K3 1410 aa19.94■□□□□ 0.78
MBD1-224ENST00000591416 BECN1Q14457 450 aa19.94■□□□□ 0.78
MBD1-224ENST00000591416 ATP10BO94823 1461 aa19.94■□□□□ 0.78
MBD1-224ENST00000591416 DDRGK1Q96HY6 314 aa19.93■□□□□ 0.78
MBD1-224ENST00000591416 WASHC2AQ641Q2 1341 aa19.93■□□□□ 0.78
MBD1-224ENST00000591416 OS9Q13438 667 aaPredicted RBP19.93■□□□□ 0.78
MBD1-224ENST00000591416 THEMISQ8N1K5 641 aaPredicted RBP19.93■□□□□ 0.78
MBD1-224ENST00000591416 RPGRIP1LQ68CZ1 1315 aa19.92■□□□□ 0.78
MBD1-224ENST00000591416 CNTLNQ9NXG0 1405 aa19.92■□□□□ 0.78
MBD1-224ENST00000591416 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
MBD1-224ENST00000591416 CTTNBP2Q8WZ74 1663 aa19.91■□□□□ 0.78
MBD1-224ENST00000591416 NUP153P49790 1475 aaKnown RBP19.91■□□□□ 0.78
MBD1-224ENST00000591416 ANKRD30BQ9BXX2 1392 aa19.91■□□□□ 0.78
MBD1-224ENST00000591416 GPATCH8Q9UKJ3 1502 aaKnown RBP19.91■□□□□ 0.78
MBD1-224ENST00000591416 FANCAO15360 1455 aa19.91■□□□□ 0.78
MBD1-224ENST00000591416 CABP2Q9NPB3 220 aa19.9■□□□□ 0.78
MBD1-224ENST00000591416 STK31Q9BXU1 1019 aa19.89■□□□□ 0.78
MBD1-224ENST00000591416 NPHP1O15259 732 aa19.89■□□□□ 0.77
MBD1-224ENST00000591416 SMC4Q9NTJ3 1288 aa19.88■□□□□ 0.77
MBD1-224ENST00000591416 ERBINQ96RT1 1412 aa19.88■□□□□ 0.77
MBD1-224ENST00000591416 PSME1Q06323 249 aa19.87■□□□□ 0.77
MBD1-224ENST00000591416 RRP7AQ9Y3A4 280 aaKnown RBP19.87■□□□□ 0.77
MBD1-224ENST00000591416 KIAA0556O60303 1618 aa19.87■□□□□ 0.77
MBD1-224ENST00000591416 DIAPH1O60610 1272 aaKnown RBP19.86■□□□□ 0.77
MBD1-224ENST00000591416 DENND4BO75064 1496 aaPredicted RBP19.86■□□□□ 0.77
MBD1-224ENST00000591416 NGEFQ8N5V2 710 aa19.85■□□□□ 0.77
MBD1-224ENST00000591416 PRAM1Q96QH2 718 aa19.85■□□□□ 0.77
MBD1-224ENST00000591416 NUP160Q12769 1436 aa19.85■□□□□ 0.77
MBD1-224ENST00000591416 ZBED9Q6R2W3 1325 aa19.84■□□□□ 0.77
MBD1-224ENST00000591416 ITPRIPQ8IWB1 547 aa19.84■□□□□ 0.77
MBD1-224ENST00000591416 CCDC9Q9Y3X0 531 aaKnown RBP19.84■□□□□ 0.77
MBD1-224ENST00000591416 APAF1O14727 1248 aa19.83■□□□□ 0.76
MBD1-224ENST00000591416 PLCH2O75038 1416 aa19.83■□□□□ 0.76
MBD1-224ENST00000591416 ATF3P18847 181 aa19.82■□□□□ 0.76
MBD1-224ENST00000591416 ASXL2Q76L83 1435 aa19.82■□□□□ 0.76
MBD1-224ENST00000591416 GGNBP2Q9H3C7 697 aa19.82■□□□□ 0.76
MBD1-224ENST00000591416 ANP32BQ92688 251 aaKnown RBP19.82■□□□□ 0.76
MBD1-224ENST00000591416 E9PSI1 815 aa19.81■□□□□ 0.76
MBD1-224ENST00000591416 RWDD1Q9H446 243 aaPredicted RBP19.8■□□□□ 0.76
MBD1-224ENST00000591416 DHX29Q7Z478 1369 aaKnown RBP19.79■□□□□ 0.76
MBD1-224ENST00000591416 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms