RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 RIMBP3CA6NJZ7 1639 aa14.14□□□□□ -0.15
DNMT1-219ENST00000589349 RIMBP3BA6NNM3 1639 aa14.14□□□□□ -0.15
DNMT1-219ENST00000589349 RIMBP3Q9UFD9 1639 aa14.14□□□□□ -0.15
DNMT1-219ENST00000589349 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
DNMT1-219ENST00000589349 HOXB1P14653 301 aaPredicted RBP14.13□□□□□ -0.15
DNMT1-219ENST00000589349 GPR153Q6NV75 609 aa14.13□□□□□ -0.15
DNMT1-219ENST00000589349 KDM2AQ9Y2K7 1162 aa14.13□□□□□ -0.15
DNMT1-219ENST00000589349 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
DNMT1-219ENST00000589349 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
DNMT1-219ENST00000589349 ABCA10Q8WWZ4 1543 aa14.12□□□□□ -0.15
DNMT1-219ENST00000589349 P3H3Q8IVL6 736 aa14.12□□□□□ -0.15
DNMT1-219ENST00000589349 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
DNMT1-219ENST00000589349 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
DNMT1-219ENST00000589349 ARSIQ5FYB1 569 aa14.11□□□□□ -0.15
DNMT1-219ENST00000589349 EMILIN3Q9NT22 766 aa14.11□□□□□ -0.15
DNMT1-219ENST00000589349 SYNJ2O15056 1496 aa14.11□□□□□ -0.15
DNMT1-219ENST00000589349 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
DNMT1-219ENST00000589349 MAP3K9P80192 1104 aa14.09□□□□□ -0.15
DNMT1-219ENST00000589349 PBRM1Q86U86 1689 aa14.08□□□□□ -0.16
DNMT1-219ENST00000589349 ZNF316A6NFI3 1004 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-219ENST00000589349 LCE2DQ5TA82 110 aaPredicted RBP14.07□□□□□ -0.16
DNMT1-219ENST00000589349 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
DNMT1-219ENST00000589349 EMP3P54852 163 aa14.05□□□□□ -0.16
DNMT1-219ENST00000589349 ARIH1Q9Y4X5 557 aaPredicted RBP14.05□□□□□ -0.16
DNMT1-219ENST00000589349 ABCA5Q8WWZ7 1642 aa14.04□□□□□ -0.16
DNMT1-219ENST00000589349 NUDT7P0C024 238 aa14.04□□□□□ -0.16
DNMT1-219ENST00000589349 KCNV2Q8TDN2 545 aa14.04□□□□□ -0.16
DNMT1-219ENST00000589349 DPYSL4O14531 572 aa14.03□□□□□ -0.16
DNMT1-219ENST00000589349 KHSRPQ92945 711 aaKnown RBP eCLIP14.03□□□□□ -0.16
DNMT1-219ENST00000589349 ARHGEF1Q92888 912 aaKnown RBP14.02□□□□□ -0.17
DNMT1-219ENST00000589349 MARVELD3Q96A59 401 aa14.02□□□□□ -0.17
DNMT1-219ENST00000589349 FHAD1B1AJZ9 1412 aa14□□□□□ -0.17
DNMT1-219ENST00000589349 EVI5O60447 810 aa14□□□□□ -0.17
DNMT1-219ENST00000589349 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
DNMT1-219ENST00000589349 GRIN2AQ12879 1464 aa13.99□□□□□ -0.17
DNMT1-219ENST00000589349 SPDYE16A6NNV3 312 aaPredicted RBP13.98□□□□□ -0.17
DNMT1-219ENST00000589349 CLASP1Q7Z460 1538 aa13.97□□□□□ -0.17
DNMT1-219ENST00000589349 KDM4FA0A1W2PPD8 638 aa13.97□□□□□ -0.17
DNMT1-219ENST00000589349 ERBB3P21860 1342 aa13.96□□□□□ -0.17
DNMT1-219ENST00000589349 PDIA6Q15084 440 aa13.96□□□□□ -0.17
DNMT1-219ENST00000589349 ADAMTS12P58397 1594 aa13.96□□□□□ -0.18
DNMT1-219ENST00000589349 ERICH3Q5RHP9 1530 aa13.95□□□□□ -0.18
DNMT1-219ENST00000589349 PSDA5PKW4 1024 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-219ENST00000589349 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-219ENST00000589349 KIF27Q86VH2 1401 aa13.95□□□□□ -0.18
DNMT1-219ENST00000589349 LHX6Q9UPM6 363 aa13.93□□□□□ -0.18
DNMT1-219ENST00000589349 FAM205CA6NFA0 338 aa13.92□□□□□ -0.18
DNMT1-219ENST00000589349 POTEMA6NI47 508 aa13.92□□□□□ -0.18
DNMT1-219ENST00000589349 POTEGQ6S5H5 508 aa13.92□□□□□ -0.18
DNMT1-219ENST00000589349 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-219ENST00000589349 JPH4Q96JJ6 628 aa13.91□□□□□ -0.18
DNMT1-219ENST00000589349 CEP170Q5SW79 1584 aa13.9□□□□□ -0.18
DNMT1-219ENST00000589349 VARS2Q5ST30 1063 aaKnown RBP13.89□□□□□ -0.19
DNMT1-219ENST00000589349 HS3ST6Q96QI5 342 aa13.89□□□□□ -0.19
DNMT1-219ENST00000589349 NUP160Q12769 1436 aa13.89□□□□□ -0.19
DNMT1-219ENST00000589349 IGF1RP08069 1367 aa13.88□□□□□ -0.19
DNMT1-219ENST00000589349 PTGER2P43116 358 aa13.86□□□□□ -0.19
DNMT1-219ENST00000589349 PPP4R3BQ5MIZ7 849 aa13.86□□□□□ -0.19
DNMT1-219ENST00000589349 PRG4Q92954 1404 aaPredicted RBP13.86□□□□□ -0.19
DNMT1-219ENST00000589349 CARMIL1Q5VZK9 1371 aa13.84□□□□□ -0.19
DNMT1-219ENST00000589349 ZNF454Q8N9F8 522 aa13.84□□□□□ -0.19
DNMT1-219ENST00000589349 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.19
DNMT1-219ENST00000589349 FOSBP53539 338 aa13.83□□□□□ -0.2
DNMT1-219ENST00000589349 PHF14O94880 888 aa13.82□□□□□ -0.2
DNMT1-219ENST00000589349 DDX12PQ92771 950 aa13.8□□□□□ -0.2
DNMT1-219ENST00000589349 POTEB3A0JP26 581 aa13.79□□□□□ -0.2
DNMT1-219ENST00000589349 POTEBQ6S5H4 581 aa13.79□□□□□ -0.2
DNMT1-219ENST00000589349 ZNF687Q8N1G0 1237 aa13.79□□□□□ -0.2
DNMT1-219ENST00000589349 EPAS1Q99814 870 aa13.79□□□□□ -0.2
DNMT1-219ENST00000589349 CUL7Q14999 1698 aa13.79□□□□□ -0.2
DNMT1-219ENST00000589349 TYW1BQ6NUM6 668 aa13.78□□□□□ -0.2
DNMT1-219ENST00000589349 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
DNMT1-219ENST00000589349 ZDHHC16Q969W1 377 aa13.77□□□□□ -0.21
DNMT1-219ENST00000589349 PCDHGA10Q9Y5H3 936 aa13.77□□□□□ -0.21
DNMT1-219ENST00000589349 KIAA0586Q9BVV6 1533 aa13.75□□□□□ -0.21
DNMT1-219ENST00000589349 GRXCR2A6NFK2 248 aa13.75□□□□□ -0.21
DNMT1-219ENST00000589349 SEMA3EO15041 775 aa13.75□□□□□ -0.21
DNMT1-219ENST00000589349 NBR1Q14596 966 aa13.75□□□□□ -0.21
DNMT1-219ENST00000589349 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
DNMT1-219ENST00000589349 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
DNMT1-219ENST00000589349 PBX2P40425 430 aa13.74□□□□□ -0.21
DNMT1-219ENST00000589349 KCNH8Q96L42 1107 aa13.74□□□□□ -0.21
DNMT1-219ENST00000589349 PCDH10Q9P2E7 1040 aa13.74□□□□□ -0.21
DNMT1-219ENST00000589349 CDAN1Q8IWY9 1227 aa13.73□□□□□ -0.21
DNMT1-219ENST00000589349 SMYD5Q6GMV2 418 aa13.72□□□□□ -0.21
DNMT1-219ENST00000589349 BCL2L12Q9HB09 334 aa13.72□□□□□ -0.21
DNMT1-219ENST00000589349 MLLT3P42568 568 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-219ENST00000589349 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-219ENST00000589349 CARMIL2Q6F5E8 1435 aa13.71□□□□□ -0.22
DNMT1-219ENST00000589349 RAPGEF2Q9Y4G8 1499 aa13.7□□□□□ -0.22
DNMT1-219ENST00000589349 TESPA1A2RU30 521 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-219ENST00000589349 ADAM33Q9BZ11 813 aa13.69□□□□□ -0.22
DNMT1-219ENST00000589349 PTPRGP23470 1445 aa13.69□□□□□ -0.22
DNMT1-219ENST00000589349 PTPREP23469 700 aa13.68□□□□□ -0.22
DNMT1-219ENST00000589349 EN1Q05925 392 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-219ENST00000589349 FAM69CQ0P6D2 419 aa13.68□□□□□ -0.22
DNMT1-219ENST00000589349 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-219ENST00000589349 ARHGAP33O14559 1287 aa13.67□□□□□ -0.22
DNMT1-219ENST00000589349 OSBPP22059 807 aa13.67□□□□□ -0.22
DNMT1-219ENST00000589349 RANGAP1P46060 587 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms