RNA–Protein interactions for RNA: ENST00000588993.1

ZNF260-203, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF260, Length 4,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-203ENST00000588993 RGPD1P0DJD0 1748 aa3.21□□□□□ -1.9
ZNF260-203ENST00000588993 ATP10BO94823 1461 aa3.21□□□□□ -1.9
ZNF260-203ENST00000588993 SAMD9Q5K651 1589 aa3.21□□□□□ -1.9
ZNF260-203ENST00000588993 EIF2AK4Q9P2K8 1649 aaKnown RBP3.21□□□□□ -1.9
ZNF260-203ENST00000588993 RIMS1Q86UR5 1692 aaKnown RBP3.2□□□□□ -1.9
ZNF260-203ENST00000588993 TNIKQ9UKE5 1360 aa3.2□□□□□ -1.9
ZNF260-203ENST00000588993 TRPM2O94759 1503 aa3.2□□□□□ -1.9
ZNF260-203ENST00000588993 TDRD9Q8NDG6 1382 aaKnown RBP3.2□□□□□ -1.9
ZNF260-203ENST00000588993 UHRF1BP1Q6BDS2 1440 aa3.2□□□□□ -1.9
ZNF260-203ENST00000588993 AKNAQ7Z591 1439 aa3.2□□□□□ -1.9
ZNF260-203ENST00000588993 ATP7AQ04656 1500 aa3.19□□□□□ -1.9
ZNF260-203ENST00000588993 NCOA1Q15788 1441 aa3.19□□□□□ -1.9
ZNF260-203ENST00000588993 EFCAB6Q5THR3 1501 aa3.19□□□□□ -1.9
ZNF260-203ENST00000588993 POTEGQ6S5H5 508 aa3.19□□□□□ -1.9
ZNF260-203ENST00000588993 JPH4Q96JJ6 628 aa3.19□□□□□ -1.9
ZNF260-203ENST00000588993 RAD54L2Q9Y4B4 1467 aa3.19□□□□□ -1.9
ZNF260-203ENST00000588993 C3P01024 1663 aa3.18□□□□□ -1.9
ZNF260-203ENST00000588993 UACAQ9BZF9 1416 aa3.18□□□□□ -1.9
ZNF260-203ENST00000588993 PTPRGP23470 1445 aa3.18□□□□□ -1.9
ZNF260-203ENST00000588993 PLXNC1O60486 1568 aa3.18□□□□□ -1.9
ZNF260-203ENST00000588993 RAPGEF2Q9Y4G8 1499 aa3.18□□□□□ -1.9
ZNF260-203ENST00000588993 TOM1O60784 492 aa3.18□□□□□ -1.9
ZNF260-203ENST00000588993 PKD2Q13563 968 aa3.17□□□□□ -1.9
ZNF260-203ENST00000588993 CD109Q6YHK3 1445 aa3.17□□□□□ -1.9
ZNF260-203ENST00000588993 CICQ96RK0 1608 aaPredicted RBP3.17□□□□□ -1.9
ZNF260-203ENST00000588993 TET3O43151 1660 aa3.16□□□□□ -1.9
ZNF260-203ENST00000588993 GOLGA3Q08378 1498 aa3.16□□□□□ -1.9
ZNF260-203ENST00000588993 C10orf71Q711Q0 1435 aa3.16□□□□□ -1.9
ZNF260-203ENST00000588993 KRTAP17-1Q9BYP8 105 aa3.16□□□□□ -1.9
ZNF260-203ENST00000588993 FAM9AQ8IZU1 332 aaPredicted RBP3.15□□□□□ -1.9
ZNF260-203ENST00000588993 SAMD9LQ8IVG5 1584 aa3.15□□□□□ -1.9
ZNF260-203ENST00000588993 WRNQ14191 1432 aaPredicted RBP eCLIP3.15□□□□□ -1.91
ZNF260-203ENST00000588993 RALGAPBQ86X10 1494 aa3.15□□□□□ -1.91
ZNF260-203ENST00000588993 MYCNP04198 464 aaPredicted RBP3.15□□□□□ -1.91
ZNF260-203ENST00000588993 ASTLQ6HA08 431 aaPredicted RBP3.15□□□□□ -1.91
ZNF260-203ENST00000588993 DISP2A7MBM2 1401 aa3.15□□□□□ -1.91
ZNF260-203ENST00000588993 NWD2Q9ULI1 1742 aa3.14□□□□□ -1.91
ZNF260-203ENST00000588993 ITSN2Q9NZM3 1697 aa3.14□□□□□ -1.91
ZNF260-203ENST00000588993 UBAP1LF5GYI3 381 aa3.14□□□□□ -1.91
ZNF260-203ENST00000588993 ABCA6Q8N139 1617 aa3.13□□□□□ -1.91
ZNF260-203ENST00000588993 THSD7BQ9C0I4 1608 aa3.13□□□□□ -1.91
ZNF260-203ENST00000588993 NKTRP30414 1462 aaKnown RBP3.13□□□□□ -1.91
ZNF260-203ENST00000588993 SPDYE2BA6NHP3 402 aa3.13□□□□□ -1.91
ZNF260-203ENST00000588993 CAPN15O75808 1086 aa3.13□□□□□ -1.91
ZNF260-203ENST00000588993 SPDYE6P0CI01 402 aa3.13□□□□□ -1.91
ZNF260-203ENST00000588993 SPDYE2Q495Y8 402 aa3.13□□□□□ -1.91
ZNF260-203ENST00000588993 CCDC125Q86Z20 511 aa3.13□□□□□ -1.91
ZNF260-203ENST00000588993 UGGT1Q9NYU2 1555 aa3.12□□□□□ -1.91
ZNF260-203ENST00000588993 TRAPPC8Q9Y2L5 1435 aa3.12□□□□□ -1.91
ZNF260-203ENST00000588993 C9orf84Q5VXU9 1444 aa3.12□□□□□ -1.91
ZNF260-203ENST00000588993 DENND4BO75064 1496 aaPredicted RBP3.12□□□□□ -1.91
ZNF260-203ENST00000588993 ADGRB2O60241 1585 aa3.12□□□□□ -1.91
ZNF260-203ENST00000588993 ROBO1Q9Y6N7 1651 aa3.12□□□□□ -1.91
ZNF260-203ENST00000588993 GLI3P10071 1580 aa3.12□□□□□ -1.91
ZNF260-203ENST00000588993 NRXN3Q9Y4C0 1643 aa3.12□□□□□ -1.91
ZNF260-203ENST00000588993 A2ML1A8K2U0 1454 aa3.11□□□□□ -1.91
ZNF260-203ENST00000588993 TRPM1Q7Z4N2 1603 aa3.11□□□□□ -1.91
ZNF260-203ENST00000588993 CAMSAP1Q5T5Y3 1602 aa3.11□□□□□ -1.91
ZNF260-203ENST00000588993 INO80Q9ULG1 1556 aaPredicted RBP3.11□□□□□ -1.91
ZNF260-203ENST00000588993 DCAF8L1A6NGE4 600 aa3.11□□□□□ -1.91
ZNF260-203ENST00000588993 IQGAP1P46940 1657 aa3.11□□□□□ -1.91
ZNF260-203ENST00000588993 MLH3Q9UHC1 1453 aa3.11□□□□□ -1.91
ZNF260-203ENST00000588993 POTEJP0CG39 1038 aa3.11□□□□□ -1.91
ZNF260-203ENST00000588993 MAP3K1Q13233 1512 aa3.1□□□□□ -1.91
ZNF260-203ENST00000588993 MAST1Q9Y2H9 1570 aa3.1□□□□□ -1.91
ZNF260-203ENST00000588993 ATP10AO60312 1499 aa3.1□□□□□ -1.91
ZNF260-203ENST00000588993 MYO5CQ9NQX4 1742 aa3.1□□□□□ -1.91
ZNF260-203ENST00000588993 ZNF772Q68DY9 489 aaPredicted RBP3.1□□□□□ -1.91
ZNF260-203ENST00000588993 FAM135BQ49AJ0 1406 aa3.1□□□□□ -1.91
ZNF260-203ENST00000588993 ZRANB1Q9UGI0 708 aa3.09□□□□□ -1.91
ZNF260-203ENST00000588993 SLIT1O75093 1534 aa3.09□□□□□ -1.91
ZNF260-203ENST00000588993 DUOX2Q9NRD8 1548 aa3.09□□□□□ -1.91
ZNF260-203ENST00000588993 NLRP1Q9C000 1473 aa3.09□□□□□ -1.91
ZNF260-203ENST00000588993 DCCP43146 1447 aa3.09□□□□□ -1.91
ZNF260-203ENST00000588993 DISP1Q96F81 1524 aa3.09□□□□□ -1.91
ZNF260-203ENST00000588993 DIP2CQ9Y2E4 1556 aa3.09□□□□□ -1.92
ZNF260-203ENST00000588993 UPF1Q92900 1129 aaKnown RBP eCLIP3.09□□□□□ -1.92
ZNF260-203ENST00000588993 RPRD2Q5VT52 1461 aaKnown RBP3.09□□□□□ -1.92
ZNF260-203ENST00000588993 MAP3K5Q99683 1374 aa3.08□□□□□ -1.92
ZNF260-203ENST00000588993 IQGAP3Q86VI3 1631 aa3.08□□□□□ -1.92
ZNF260-203ENST00000588993 POTEB2H3BUK9 544 aa3.08□□□□□ -1.92
ZNF260-203ENST00000588993 HSPA1LP34931 641 aa3.08□□□□□ -1.92
ZNF260-203ENST00000588993 LRRIQ1Q96JM4 1722 aa3.08□□□□□ -1.92
ZNF260-203ENST00000588993 PARD3Q8TEW0 1356 aa3.08□□□□□ -1.92
ZNF260-203ENST00000588993 CEP170BQ9Y4F5 1589 aaPredicted RBP3.08□□□□□ -1.92
ZNF260-203ENST00000588993 ARID4BQ4LE39 1312 aaPredicted RBP3.08□□□□□ -1.92
ZNF260-203ENST00000588993 ZC3H4Q9UPT8 1303 aaKnown RBP3.08□□□□□ -1.92
ZNF260-203ENST00000588993 SHANK2Q9UPX8 1470 aa3.08□□□□□ -1.92
ZNF260-203ENST00000588993 SMG6Q86US8 1419 aaKnown RBP3.07□□□□□ -1.92
ZNF260-203ENST00000588993 GPATCH8Q9UKJ3 1502 aaKnown RBP3.07□□□□□ -1.92
ZNF260-203ENST00000588993 ADAMTS7Q9UKP4 1686 aa3.07□□□□□ -1.92
ZNF260-203ENST00000588993 CASZ1Q86V15 1759 aa3.07□□□□□ -1.92
ZNF260-203ENST00000588993 ERVK-7P63135 1459 aa3.07□□□□□ -1.92
ZNF260-203ENST00000588993 LAMB1P07942 1786 aa3.07□□□□□ -1.92
ZNF260-203ENST00000588993 ARIH1Q9Y4X5 557 aaPredicted RBP3.07□□□□□ -1.92
ZNF260-203ENST00000588993 SSC5DA1L4H1 1573 aa3.07□□□□□ -1.92
ZNF260-203ENST00000588993 SPATA31A6Q5VVP1 1343 aa3.07□□□□□ -1.92
ZNF260-203ENST00000588993 COL16A1Q07092 1604 aaPredicted RBP3.06□□□□□ -1.92
ZNF260-203ENST00000588993 ATAD2Q6PL18 1390 aa3.06□□□□□ -1.92
ZNF260-203ENST00000588993 HSPA2P54652 639 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms