RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 ARID4BQ4LE39 1312 aaPredicted RBP20.52■□□□□ 0.87
SAFB-205ENST00000588852 MYBBP1AQ9BQG0 1328 aaKnown RBP20.51■□□□□ 0.87
SAFB-205ENST00000588852 CDCA7LQ96GN5 454 aa20.5■□□□□ 0.87
SAFB-205ENST00000588852 CC2D1BQ5T0F9 858 aaKnown RBP20.49■□□□□ 0.87
SAFB-205ENST00000588852 EXOC6Q8TAG9 804 aa20.49■□□□□ 0.87
SAFB-205ENST00000588852 NOP58Q9Y2X3 529 aaKnown RBP20.47■□□□□ 0.87
SAFB-205ENST00000588852 LRPPRCP42704 1394 aaKnown RBP20.47■□□□□ 0.87
SAFB-205ENST00000588852 NUP160Q12769 1436 aa20.47■□□□□ 0.87
SAFB-205ENST00000588852 ABCA8O94911 1581 aa20.45■□□□□ 0.86
SAFB-205ENST00000588852 RALBP1Q15311 655 aa20.44■□□□□ 0.86
SAFB-205ENST00000588852 SKAP1Q86WV1 359 aa20.44■□□□□ 0.86
SAFB-205ENST00000588852 PLIN1O60240 522 aa20.44■□□□□ 0.86
SAFB-205ENST00000588852 BRD4O60885 1362 aaPredicted RBP20.44■□□□□ 0.86
SAFB-205ENST00000588852 RRP1P56182 461 aaKnown RBP20.43■□□□□ 0.86
SAFB-205ENST00000588852 PER1O15534 1290 aaPredicted RBP20.42■□□□□ 0.86
SAFB-205ENST00000588852 RCAN3Q9UKA8 241 aa20.42■□□□□ 0.86
SAFB-205ENST00000588852 ARHGEF12Q9NZN5 1544 aa20.42■□□□□ 0.86
SAFB-205ENST00000588852 SHANK2Q9UPX8 1470 aa20.41■□□□□ 0.86
SAFB-205ENST00000588852 PTPRGP23470 1445 aa20.41■□□□□ 0.86
SAFB-205ENST00000588852 NPM2Q86SE8 214 aaKnown RBP20.41■□□□□ 0.86
SAFB-205ENST00000588852 FAM135AQ9P2D6 1515 aa20.41■□□□□ 0.86
SAFB-205ENST00000588852 CCDC144AA2RUR9 1427 aa20.4■□□□□ 0.86
SAFB-205ENST00000588852 NLRP13Q86W25 1043 aa20.4■□□□□ 0.86
SAFB-205ENST00000588852 DISP3Q9P2K9 1392 aa20.39■□□□□ 0.86
SAFB-205ENST00000588852 PANK3Q9H999 370 aa20.39■□□□□ 0.85
SAFB-205ENST00000588852 PRAG1Q86YV5 1406 aa20.38■□□□□ 0.85
SAFB-205ENST00000588852 PLA2R1Q13018 1463 aa20.38■□□□□ 0.85
SAFB-205ENST00000588852 KTN1Q86UP2 1357 aaKnown RBP20.38■□□□□ 0.85
SAFB-205ENST00000588852 KDM5DQ9BY66 1539 aa20.38■□□□□ 0.85
SAFB-205ENST00000588852 DEKP35659 375 aaKnown RBP20.37■□□□□ 0.85
SAFB-205ENST00000588852 SAMD9LQ8IVG5 1584 aa20.37■□□□□ 0.85
SAFB-205ENST00000588852 TESK2Q96S53 571 aa20.36■□□□□ 0.85
SAFB-205ENST00000588852 PARD3Q8TEW0 1356 aa20.36■□□□□ 0.85
SAFB-205ENST00000588852 ANP32AP39687 249 aaKnown RBP20.35■□□□□ 0.85
SAFB-205ENST00000588852 IPO9Q96P70 1041 aaKnown RBP20.35■□□□□ 0.85
SAFB-205ENST00000588852 CCDC141Q6ZP82 1450 aa20.35■□□□□ 0.85
SAFB-205ENST00000588852 CDC42BPBQ9Y5S2 1711 aa20.33■□□□□ 0.85
SAFB-205ENST00000588852 SYCP2Q9BX26 1530 aa20.33■□□□□ 0.84
SAFB-205ENST00000588852 A2MP01023 1474 aa20.33■□□□□ 0.84
SAFB-205ENST00000588852 E9PCH4 1651 aa20.32■□□□□ 0.84
SAFB-205ENST00000588852 PLEKHH2Q8IVE3 1493 aa20.31■□□□□ 0.84
SAFB-205ENST00000588852 TRPM1Q7Z4N2 1603 aa20.31■□□□□ 0.84
SAFB-205ENST00000588852 ZBTB47Q9UFB7 747 aaPredicted RBP20.3■□□□□ 0.84
SAFB-205ENST00000588852 ARHGEF5Q12774 1597 aa20.29■□□□□ 0.84
SAFB-205ENST00000588852 C20orf194Q5TEA3 1177 aa20.27■□□□□ 0.84
SAFB-205ENST00000588852 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.84
SAFB-205ENST00000588852 ADAMTS8Q9UP79 889 aa20.26■□□□□ 0.83
SAFB-205ENST00000588852 CRBNQ96SW2 442 aa20.26■□□□□ 0.83
SAFB-205ENST00000588852 PDE4AP27815 886 aa20.25■□□□□ 0.83
SAFB-205ENST00000588852 TTC37Q6PGP7 1564 aa20.25■□□□□ 0.83
SAFB-205ENST00000588852 ERBINQ96RT1 1412 aa20.24■□□□□ 0.83
SAFB-205ENST00000588852 COL17A1Q9UMD9 1497 aaPredicted RBP20.23■□□□□ 0.83
SAFB-205ENST00000588852 TMF1P82094 1093 aa20.23■□□□□ 0.83
SAFB-205ENST00000588852 RSPH4AQ5TD94 716 aa20.23■□□□□ 0.83
SAFB-205ENST00000588852 PREX2Q70Z35 1606 aa20.23■□□□□ 0.83
SAFB-205ENST00000588852 GPRASP1Q5JY77 1395 aa20.22■□□□□ 0.83
SAFB-205ENST00000588852 PDE3BQ13370 1112 aa20.21■□□□□ 0.83
SAFB-205ENST00000588852 LAS1LQ9Y4W2 734 aaKnown RBP20.21■□□□□ 0.83
SAFB-205ENST00000588852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.2■□□□□ 0.823e-6■■■■□ 22.4
SAFB-205ENST00000588852 TCERG1O14776 1098 aaKnown RBP20.18■□□□□ 0.82
SAFB-205ENST00000588852 ERCC6L2Q5T890 1561 aa20.18■□□□□ 0.82
SAFB-205ENST00000588852 BACH2Q9BYV9 841 aa20.18■□□□□ 0.82
SAFB-205ENST00000588852 PRDM15P57071 1507 aaPredicted RBP20.17■□□□□ 0.82
SAFB-205ENST00000588852 MYO5CQ9NQX4 1742 aa20.16■□□□□ 0.82
SAFB-205ENST00000588852 MAGI2Q86UL8 1455 aa20.16■□□□□ 0.82
SAFB-205ENST00000588852 AFAP1Q8N556 730 aa20.15■□□□□ 0.82
SAFB-205ENST00000588852 PPP2R1AP30153 589 aa20.15■□□□□ 0.82
SAFB-205ENST00000588852 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.82
SAFB-205ENST00000588852 KNSTRNQ9Y448 316 aa20.14■□□□□ 0.82
SAFB-205ENST00000588852 PLEKHH1Q9ULM0 1364 aa20.14■□□□□ 0.82
SAFB-205ENST00000588852 BLMP54132 1417 aaPredicted RBP20.14■□□□□ 0.81
SAFB-205ENST00000588852 UNC13BO14795 1591 aa20.14■□□□□ 0.81
SAFB-205ENST00000588852 WASHC2CQ9Y4E1 1318 aa20.12■□□□□ 0.81
SAFB-205ENST00000588852 RTL5Q5HYW3 569 aaPredicted RBP20.11■□□□□ 0.81
SAFB-205ENST00000588852 TRAPPC8Q9Y2L5 1435 aa20.11■□□□□ 0.81
SAFB-205ENST00000588852 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
SAFB-205ENST00000588852 AMER1Q5JTC6 1135 aaPredicted RBP20.1■□□□□ 0.81
SAFB-205ENST00000588852 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
SAFB-205ENST00000588852 WDR7Q9Y4E6 1490 aa20.1■□□□□ 0.81
SAFB-205ENST00000588852 SLC4A3P48751 1232 aa20.09■□□□□ 0.81
SAFB-205ENST00000588852 IQGAP3Q86VI3 1631 aa20.09■□□□□ 0.81
SAFB-205ENST00000588852 DUSP27Q5VZP5 1158 aa20.09■□□□□ 0.81
SAFB-205ENST00000588852 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.81
SAFB-205ENST00000588852 EFCAB2Q5VUJ9 269 aa20.06■□□□□ 0.8
SAFB-205ENST00000588852 MAST1Q9Y2H9 1570 aa20.05■□□□□ 0.8
SAFB-205ENST00000588852 CHD1O14646 1710 aa20.05■□□□□ 0.8
SAFB-205ENST00000588852 ZMYM4Q5VZL5 1548 aa20.05■□□□□ 0.8
SAFB-205ENST00000588852 DUOX2Q9NRD8 1548 aa20.05■□□□□ 0.8
SAFB-205ENST00000588852 NEFMP07197 916 aa20.04■□□□□ 0.8
SAFB-205ENST00000588852 MS4A1P11836 297 aa20.04■□□□□ 0.8
SAFB-205ENST00000588852 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.8
SAFB-205ENST00000588852 APAF1O14727 1248 aa20.02■□□□□ 0.8
SAFB-205ENST00000588852 DMRT2Q9Y5R5 561 aa20.02■□□□□ 0.8
SAFB-205ENST00000588852 PLXNC1O60486 1568 aa20.02■□□□□ 0.8
SAFB-205ENST00000588852 GOLGA2Q08379 1002 aa20.02■□□□□ 0.79
SAFB-205ENST00000588852 CFAP70Q5T0N1 1121 aa20.01■□□□□ 0.79
SAFB-205ENST00000588852 ATP10AO60312 1499 aa20.01■□□□□ 0.79
SAFB-205ENST00000588852 PLCH2O75038 1416 aa20.01■□□□□ 0.79
SAFB-205ENST00000588852 LAMC1P11047 1609 aa20.01■□□□□ 0.79
SAFB-205ENST00000588852 EIF2AK4Q9P2K8 1649 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms