RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 PPM1GO15355 546 aaPredicted RBP15.03■□□□□ -0
BCAS3-220ENST00000588720 KIF7Q2M1P5 1343 aa15.03■□□□□ -0
BCAS3-220ENST00000588720 CFAP43Q8NDM7 1665 aa15.03■□□□□ -0
BCAS3-220ENST00000588720 PPP4R2Q9NY27 417 aa15.02■□□□□ -0
BCAS3-220ENST00000588720 GPATCH8Q9UKJ3 1502 aaKnown RBP15.01□□□□□ -0.01
BCAS3-220ENST00000588720 WASHC2AQ641Q2 1341 aa15.01□□□□□ -0.01
BCAS3-220ENST00000588720 NBPF8Q3BBV2 869 aa15.01□□□□□ -0.01
BCAS3-220ENST00000588720 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
BCAS3-220ENST00000588720 WDR97A6NE52 1622 aa15.01□□□□□ -0.01
BCAS3-220ENST00000588720 TARBP1Q13395 1621 aaKnown RBP15□□□□□ -0.01
BCAS3-220ENST00000588720 NEUROD2Q15784 382 aa15□□□□□ -0.01
BCAS3-220ENST00000588720 SCAPERQ9BY12 1400 aa15□□□□□ -0.01
BCAS3-220ENST00000588720 ATP10BO94823 1461 aa15□□□□□ -0.01
BCAS3-220ENST00000588720 PBRM1Q86U86 1689 aa15□□□□□ -0.01
BCAS3-220ENST00000588720 C14orf37Q86TY3 774 aa15□□□□□ -0.01
BCAS3-220ENST00000588720 MAPK8IP3Q9UPT6 1336 aa15□□□□□ -0.01
BCAS3-220ENST00000588720 TRAK1Q9UPV9 953 aa15□□□□□ -0.01
BCAS3-220ENST00000588720 NUTM2DQ5VT03 806 aaPredicted RBP15□□□□□ -0.01
BCAS3-220ENST00000588720 PTPRKQ15262 1439 aa15□□□□□ -0.01
BCAS3-220ENST00000588720 NUP160Q12769 1436 aa14.99□□□□□ -0.01
BCAS3-220ENST00000588720 ANKRD30BQ9BXX2 1392 aa14.99□□□□□ -0.01
BCAS3-220ENST00000588720 PANK3Q9H999 370 aa14.99□□□□□ -0.01
BCAS3-220ENST00000588720 MYBBP1AQ9BQG0 1328 aaKnown RBP14.99□□□□□ -0.01
BCAS3-220ENST00000588720 HDGFL2Q7Z4V5 671 aaPredicted RBP14.99□□□□□ -0.01
BCAS3-220ENST00000588720 CNTLNQ9NXG0 1405 aa14.98□□□□□ -0.01
BCAS3-220ENST00000588720 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
BCAS3-220ENST00000588720 SAMD9Q5K651 1589 aa14.96□□□□□ -0.01
BCAS3-220ENST00000588720 U2SURPO15042 1029 aaKnown RBP14.96□□□□□ -0.01
BCAS3-220ENST00000588720 RBM19Q9Y4C8 960 aaKnown RBP14.96□□□□□ -0.01
BCAS3-220ENST00000588720 DISP1Q96F81 1524 aa14.96□□□□□ -0.01
BCAS3-220ENST00000588720 PNNQ9H307 717 aaKnown RBP14.96□□□□□ -0.01
BCAS3-220ENST00000588720 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
BCAS3-220ENST00000588720 TERF2IPQ9NYB0 399 aa14.93□□□□□ -0.02
BCAS3-220ENST00000588720 NCLP19338 710 aaKnown RBP14.92□□□□□ -0.02
BCAS3-220ENST00000588720 MAPKBP1O60336 1514 aa14.9□□□□□ -0.02
BCAS3-220ENST00000588720 UPF2Q9HAU5 1272 aaKnown RBP14.9□□□□□ -0.02
BCAS3-220ENST00000588720 PDE3BQ13370 1112 aa14.9□□□□□ -0.02
BCAS3-220ENST00000588720 EID1Q9Y6B2 187 aa14.9□□□□□ -0.02
BCAS3-220ENST00000588720 EVC2Q86UK5 1308 aa14.89□□□□□ -0.03
BCAS3-220ENST00000588720 NBPF1Q3BBV0 1214 aa14.89□□□□□ -0.03
BCAS3-220ENST00000588720 ITSN2Q9NZM3 1697 aa14.89□□□□□ -0.03
BCAS3-220ENST00000588720 CD109Q6YHK3 1445 aa14.88□□□□□ -0.03
BCAS3-220ENST00000588720 RPRD2Q5VT52 1461 aaKnown RBP14.88□□□□□ -0.03
BCAS3-220ENST00000588720 B4GALNT3Q6L9W6 998 aa14.88□□□□□ -0.03
BCAS3-220ENST00000588720 ZBED9Q6R2W3 1325 aa14.88□□□□□ -0.03
BCAS3-220ENST00000588720 RAPGEF3O95398 923 aa14.88□□□□□ -0.03
BCAS3-220ENST00000588720 CENPJQ9HC77 1338 aaPredicted RBP14.88□□□□□ -0.03
BCAS3-220ENST00000588720 RCAN3Q9UKA8 241 aa14.87□□□□□ -0.03
BCAS3-220ENST00000588720 ZBTB7CA1YPR0 619 aa14.87□□□□□ -0.03
BCAS3-220ENST00000588720 ADGRL1O94910 1474 aa14.87□□□□□ -0.03
BCAS3-220ENST00000588720 U2AF1L5P0DN76 240 aaPredicted RBP14.87□□□□□ -0.03
BCAS3-220ENST00000588720 U2AF1Q01081 240 aaKnown RBP eCLIP14.87□□□□□ -0.03
BCAS3-220ENST00000588720 CFAP70Q5T0N1 1121 aa14.86□□□□□ -0.03
BCAS3-220ENST00000588720 PLCH2O75038 1416 aa14.85□□□□□ -0.03
BCAS3-220ENST00000588720 FTSJ3Q8IY81 847 aaKnown RBP14.85□□□□□ -0.03
BCAS3-220ENST00000588720 FRAT1Q92837 279 aaPredicted RBP14.84□□□□□ -0.03
BCAS3-220ENST00000588720 LAS1LQ9Y4W2 734 aaKnown RBP14.84□□□□□ -0.03
BCAS3-220ENST00000588720 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
BCAS3-220ENST00000588720 MYH16Q9H6N6 1097 aa14.83□□□□□ -0.03
BCAS3-220ENST00000588720 CGNL1Q0VF96 1302 aa14.83□□□□□ -0.03
BCAS3-220ENST00000588720 FANCAO15360 1455 aa14.83□□□□□ -0.04
BCAS3-220ENST00000588720 MS4A1P11836 297 aa14.83□□□□□ -0.04
BCAS3-220ENST00000588720 DDRGK1Q96HY6 314 aa14.83□□□□□ -0.04
BCAS3-220ENST00000588720 CEP170Q5SW79 1584 aa14.83□□□□□ -0.04
BCAS3-220ENST00000588720 GOLGA2Q08379 1002 aa14.82□□□□□ -0.04
BCAS3-220ENST00000588720 TRIM44Q96DX7 344 aaPredicted RBP14.82□□□□□ -0.04
BCAS3-220ENST00000588720 SLC52A1Q9NWF4 448 aa14.82□□□□□ -0.04
BCAS3-220ENST00000588720 NOP58Q9Y2X3 529 aaKnown RBP14.81□□□□□ -0.04
BCAS3-220ENST00000588720 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.81□□□□□ -0.04
BCAS3-220ENST00000588720 DEKP35659 375 aaKnown RBP14.8□□□□□ -0.04
BCAS3-220ENST00000588720 MINK1Q8N4C8 1332 aaPredicted RBP14.8□□□□□ -0.04
BCAS3-220ENST00000588720 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
BCAS3-220ENST00000588720 TMEM132EQ6IEE7 984 aa14.79□□□□□ -0.04
BCAS3-220ENST00000588720 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
BCAS3-220ENST00000588720 SOX12O15370 315 aa14.78□□□□□ -0.04
BCAS3-220ENST00000588720 CCDC146Q8IYE0 955 aa14.78□□□□□ -0.04
BCAS3-220ENST00000588720 RPGRIP1LQ68CZ1 1315 aa14.78□□□□□ -0.04
BCAS3-220ENST00000588720 ABCC2Q92887 1545 aa14.77□□□□□ -0.04
BCAS3-220ENST00000588720 SHANK2Q9UPX8 1470 aa14.77□□□□□ -0.04
BCAS3-220ENST00000588720 ERBINQ96RT1 1412 aa14.77□□□□□ -0.05
BCAS3-220ENST00000588720 SYCP2Q9BX26 1530 aa14.77□□□□□ -0.05
BCAS3-220ENST00000588720 ASXL2Q76L83 1435 aa14.76□□□□□ -0.05
BCAS3-220ENST00000588720 MAGI3Q5TCQ9 1506 aa14.76□□□□□ -0.05
BCAS3-220ENST00000588720 CHMP4BQ9H444 224 aaKnown RBP14.76□□□□□ -0.05
BCAS3-220ENST00000588720 DHX29Q7Z478 1369 aaKnown RBP14.76□□□□□ -0.05
BCAS3-220ENST00000588720 WDR7Q9Y4E6 1490 aa14.76□□□□□ -0.05
BCAS3-220ENST00000588720 DNMT1P26358 1616 aaKnown RBP14.75□□□□□ -0.05
BCAS3-220ENST00000588720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.75□□□□□ -0.05
BCAS3-220ENST00000588720 CALD1Q05682 793 aaKnown RBP14.75□□□□□ -0.05
BCAS3-220ENST00000588720 C11orf95C9JLR9 678 aaPredicted RBP14.74□□□□□ -0.05
BCAS3-220ENST00000588720 RTN4Q9NQC3 1192 aaKnown RBP14.74□□□□□ -0.05
BCAS3-220ENST00000588720 DUOX2Q9NRD8 1548 aa14.74□□□□□ -0.05
BCAS3-220ENST00000588720 HAP1P54257 671 aaPredicted RBP14.73□□□□□ -0.05
BCAS3-220ENST00000588720 NGEFQ8N5V2 710 aa14.73□□□□□ -0.05
BCAS3-220ENST00000588720 NGDNQ8NEJ9 315 aaKnown RBP14.72□□□□□ -0.05
BCAS3-220ENST00000588720 DENND4BO75064 1496 aaPredicted RBP14.72□□□□□ -0.05
BCAS3-220ENST00000588720 ADGRL2O95490 1459 aa14.7□□□□□ -0.06
BCAS3-220ENST00000588720 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
BCAS3-220ENST00000588720 RGS3P49796 1198 aa14.7□□□□□ -0.06
BCAS3-220ENST00000588720 TRAPPC8Q9Y2L5 1435 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms