RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
PTPRS-206ENST00000588552 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
PTPRS-206ENST00000588552 ZNF330Q9Y3S2 320 aaPredicted RBP19.72■□□□□ 0.75
PTPRS-206ENST00000588552 CGNL1Q0VF96 1302 aa19.71■□□□□ 0.75
PTPRS-206ENST00000588552 APBB1O00213 710 aa19.71■□□□□ 0.75
PTPRS-206ENST00000588552 HSP90AB1P08238 724 aaKnown RBP19.71■□□□□ 0.75
PTPRS-206ENST00000588552 AFAP1Q8N556 730 aa19.71■□□□□ 0.75
PTPRS-206ENST00000588552 LMOD3Q0VAK6 560 aa19.7■□□□□ 0.74
PTPRS-206ENST00000588552 SMC4Q9NTJ3 1288 aa19.7■□□□□ 0.74
PTPRS-206ENST00000588552 CCDC9Q9Y3X0 531 aaKnown RBP19.7■□□□□ 0.74
PTPRS-206ENST00000588552 TPRNQ4KMQ1 711 aa19.69■□□□□ 0.74
PTPRS-206ENST00000588552 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
PTPRS-206ENST00000588552 ERICH6BQ5W0A0 696 aa19.69■□□□□ 0.74
PTPRS-206ENST00000588552 COG3Q96JB2 828 aa19.69■□□□□ 0.74
PTPRS-206ENST00000588552 PDE3BQ13370 1112 aa19.69■□□□□ 0.74
PTPRS-206ENST00000588552 RWDD1Q9H446 243 aaPredicted RBP19.69■□□□□ 0.74
PTPRS-206ENST00000588552 ZRSR1Q15695 479 aaKnown RBP19.68■□□□□ 0.74
PTPRS-206ENST00000588552 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.66■□□□□ 0.74
PTPRS-206ENST00000588552 PRKRIP1Q9H875 184 aaPredicted RBP19.66■□□□□ 0.74
PTPRS-206ENST00000588552 TAOK2Q9UL54 1235 aa19.66■□□□□ 0.74
PTPRS-206ENST00000588552 STAC3Q96MF2 364 aa19.65■□□□□ 0.74
PTPRS-206ENST00000588552 NAP1L2Q9ULW6 460 aaPredicted RBP19.65■□□□□ 0.74
PTPRS-206ENST00000588552 CFAP44Q96MT7 982 aa19.65■□□□□ 0.74
PTPRS-206ENST00000588552 CENPJQ9HC77 1338 aaPredicted RBP19.64■□□□□ 0.74
PTPRS-206ENST00000588552 RRP7AQ9Y3A4 280 aaKnown RBP19.64■□□□□ 0.74
PTPRS-206ENST00000588552 MCCP23508 829 aa19.64■□□□□ 0.73
PTPRS-206ENST00000588552 HSCBQ8IWL3 235 aa19.62■□□□□ 0.73
PTPRS-206ENST00000588552 NOP58Q9Y2X3 529 aaKnown RBP19.62■□□□□ 0.73
PTPRS-206ENST00000588552 CLUAP1Q96AJ1 413 aa19.62■□□□□ 0.73
PTPRS-206ENST00000588552 CDK11BP21127 795 aaKnown RBP19.61■□□□□ 0.73
PTPRS-206ENST00000588552 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
PTPRS-206ENST00000588552 TRIM44Q96DX7 344 aaPredicted RBP19.61■□□□□ 0.73
PTPRS-206ENST00000588552 PMFBP1Q8TBY8 1022 aa19.6■□□□□ 0.73
PTPRS-206ENST00000588552 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
PTPRS-206ENST00000588552 SLC4A10Q6U841 1118 aa19.59■□□□□ 0.73
PTPRS-206ENST00000588552 LAMC3Q9Y6N6 1575 aa19.58■□□□□ 0.73
PTPRS-206ENST00000588552 TROQ12816 1431 aaPredicted RBP19.58■□□□□ 0.72
PTPRS-206ENST00000588552 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
PTPRS-206ENST00000588552 HDAC5Q9UQL6 1122 aa19.56■□□□□ 0.72
PTPRS-206ENST00000588552 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
PTPRS-206ENST00000588552 KIAA1211Q6ZU35 1233 aa19.55■□□□□ 0.72
PTPRS-206ENST00000588552 MIA2Q96PC5 1412 aa19.55■□□□□ 0.72
PTPRS-206ENST00000588552 HMMRO75330 724 aa19.55■□□□□ 0.72
PTPRS-206ENST00000588552 C9orf84Q5VXU9 1444 aa19.54■□□□□ 0.72
PTPRS-206ENST00000588552 PLEKHH2Q8IVE3 1493 aa19.54■□□□□ 0.72
PTPRS-206ENST00000588552 CHMP3Q9Y3E7 222 aa19.54■□□□□ 0.72
PTPRS-206ENST00000588552 KIAA0586Q9BVV6 1533 aa19.54■□□□□ 0.72
PTPRS-206ENST00000588552 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
PTPRS-206ENST00000588552 PTMAP06454 111 aaKnown RBP19.52■□□□□ 0.72
PTPRS-206ENST00000588552 KIF7Q2M1P5 1343 aa19.52■□□□□ 0.72
PTPRS-206ENST00000588552 TCERG1O14776 1098 aaKnown RBP19.52■□□□□ 0.72
PTPRS-206ENST00000588552 TMEM132EQ6IEE7 984 aa19.52■□□□□ 0.72
PTPRS-206ENST00000588552 PSME1Q06323 249 aa19.52■□□□□ 0.72
PTPRS-206ENST00000588552 DIAPH1O60610 1272 aaKnown RBP19.51■□□□□ 0.71
PTPRS-206ENST00000588552 C1orf141Q5JVX7 400 aa19.51■□□□□ 0.71
PTPRS-206ENST00000588552 CCDC7Q96M83 1385 aa19.51■□□□□ 0.71
PTPRS-206ENST00000588552 E9PSI1 815 aa19.51■□□□□ 0.71
PTPRS-206ENST00000588552 ELL2O00472 640 aaPredicted RBP19.5■□□□□ 0.71
PTPRS-206ENST00000588552 SPRYD3Q8NCJ5 442 aa19.5■□□□□ 0.71
PTPRS-206ENST00000588552 TIAM1Q13009 1591 aa19.5■□□□□ 0.71
PTPRS-206ENST00000588552 SCAPERQ9BY12 1400 aa19.5■□□□□ 0.71
PTPRS-206ENST00000588552 TAF7LQ5H9L4 462 aa19.49■□□□□ 0.71
PTPRS-206ENST00000588552 APAF1O14727 1248 aa19.49■□□□□ 0.71
PTPRS-206ENST00000588552 EVA1CP58658 441 aa19.49■□□□□ 0.71
PTPRS-206ENST00000588552 GORABQ5T7V8 394 aa19.49■□□□□ 0.71
PTPRS-206ENST00000588552 GOLGA6L4A6NEF3 574 aa19.47■□□□□ 0.71
PTPRS-206ENST00000588552 CFAP70Q5T0N1 1121 aa19.47■□□□□ 0.71
PTPRS-206ENST00000588552 GPATCH3Q96I76 525 aa19.47■□□□□ 0.71
PTPRS-206ENST00000588552 RBM19Q9Y4C8 960 aaKnown RBP19.47■□□□□ 0.71
PTPRS-206ENST00000588552 ZBED9Q6R2W3 1325 aa19.47■□□□□ 0.71
PTPRS-206ENST00000588552 BCL2L13Q9BXK5 485 aa19.46■□□□□ 0.71
PTPRS-206ENST00000588552 CABP2Q9NPB3 220 aa19.46■□□□□ 0.71
PTPRS-206ENST00000588552 TEFQ10587 303 aa19.46■□□□□ 0.71
PTPRS-206ENST00000588552 HFM1A2PYH4 1435 aa19.45■□□□□ 0.7
PTPRS-206ENST00000588552 IQGAP2Q13576 1575 aa19.45■□□□□ 0.7
PTPRS-206ENST00000588552 TRIM6-TRIM34B2RNG4 842 aa19.44■□□□□ 0.7
PTPRS-206ENST00000588552 TULP1O00294 542 aaPredicted RBP19.43■□□□□ 0.7
PTPRS-206ENST00000588552 PLCB2Q00722 1185 aa19.43■□□□□ 0.7
PTPRS-206ENST00000588552 CDK13Q14004 1512 aaKnown RBP19.43■□□□□ 0.7
PTPRS-206ENST00000588552 EPRSP07814 1512 aaKnown RBP19.43■□□□□ 0.7
PTPRS-206ENST00000588552 TMX4Q9H1E5 349 aaPredicted RBP19.43■□□□□ 0.7
PTPRS-206ENST00000588552 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
PTPRS-206ENST00000588552 KIAA1107Q9UPP5 1409 aa19.42■□□□□ 0.7
PTPRS-206ENST00000588552 DAPK1P53355 1430 aa19.42■□□□□ 0.7
PTPRS-206ENST00000588552 RAPGEF3O95398 923 aa19.42■□□□□ 0.7
PTPRS-206ENST00000588552 ZKSCAN2Q63HK3 967 aa19.42■□□□□ 0.7
PTPRS-206ENST00000588552 ATF3P18847 181 aa19.42■□□□□ 0.7
PTPRS-206ENST00000588552 RIPK4P57078 832 aa19.42■□□□□ 0.7
PTPRS-206ENST00000588552 GGNBP2Q9H3C7 697 aa19.42■□□□□ 0.7
PTPRS-206ENST00000588552 MFAP1P55081 439 aaKnown RBP19.41■□□□□ 0.7
PTPRS-206ENST00000588552 PLIN1O60240 522 aa19.41■□□□□ 0.7
PTPRS-206ENST00000588552 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
PTPRS-206ENST00000588552 ISY1Q9ULR0 285 aaKnown RBP19.41■□□□□ 0.7
PTPRS-206ENST00000588552 CNTLNQ9NXG0 1405 aa19.41■□□□□ 0.7
PTPRS-206ENST00000588552 CUL7Q14999 1698 aa19.4■□□□□ 0.7
PTPRS-206ENST00000588552 NGEFQ8N5V2 710 aa19.4■□□□□ 0.7
PTPRS-206ENST00000588552 RUNDC1Q96C34 613 aa19.39■□□□□ 0.69
PTPRS-206ENST00000588552 TTC5Q8N0Z6 440 aa19.38■□□□□ 0.69
PTPRS-206ENST00000588552 GTF2E1P29083 439 aaPredicted RBP19.38■□□□□ 0.69
PTPRS-206ENST00000588552 RRP1P56182 461 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms