RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 CDC42BPAQ5VT25 1732 aa20.6■□□□□ 0.89
KDM4B-206ENST00000588361 ABCA8O94911 1581 aa20.59■□□□□ 0.89
KDM4B-206ENST00000588361 KDM5CP41229 1560 aa20.59■□□□□ 0.89
KDM4B-206ENST00000588361 ADCY10Q96PN6 1610 aa20.59■□□□□ 0.89
KDM4B-206ENST00000588361 CC2D1BQ5T0F9 858 aaKnown RBP20.59■□□□□ 0.89
KDM4B-206ENST00000588361 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.89
KDM4B-206ENST00000588361 ARID4BQ4LE39 1312 aaPredicted RBP20.58■□□□□ 0.88
KDM4B-206ENST00000588361 RALGAPBQ86X10 1494 aa20.58■□□□□ 0.88
KDM4B-206ENST00000588361 SMG6Q86US8 1419 aaKnown RBP20.57■□□□□ 0.88
KDM4B-206ENST00000588361 UHRF1BP1Q6BDS2 1440 aa20.56■□□□□ 0.88
KDM4B-206ENST00000588361 CCDC144AA2RUR9 1427 aa20.56■□□□□ 0.88
KDM4B-206ENST00000588361 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
KDM4B-206ENST00000588361 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
KDM4B-206ENST00000588361 MYBBP1AQ9BQG0 1328 aaKnown RBP20.55■□□□□ 0.88
KDM4B-206ENST00000588361 SHANK2Q9UPX8 1470 aa20.53■□□□□ 0.88
KDM4B-206ENST00000588361 CCDC141Q6ZP82 1450 aa20.52■□□□□ 0.87
KDM4B-206ENST00000588361 POLR1AO95602 1720 aaPredicted RBP20.51■□□□□ 0.87
KDM4B-206ENST00000588361 RALBP1Q15311 655 aa20.51■□□□□ 0.87
KDM4B-206ENST00000588361 FAM135AQ9P2D6 1515 aa20.5■□□□□ 0.87
KDM4B-206ENST00000588361 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
KDM4B-206ENST00000588361 ZBTB47Q9UFB7 747 aaPredicted RBP20.49■□□□□ 0.87
KDM4B-206ENST00000588361 ANP32AP39687 249 aaKnown RBP20.49■□□□□ 0.87
KDM4B-206ENST00000588361 ARHGAP5Q13017 1502 aa20.48■□□□□ 0.87
KDM4B-206ENST00000588361 RSPH4AQ5TD94 716 aa20.48■□□□□ 0.87
KDM4B-206ENST00000588361 IPO9Q96P70 1041 aaKnown RBP20.47■□□□□ 0.87
KDM4B-206ENST00000588361 PANK3Q9H999 370 aa20.47■□□□□ 0.87
KDM4B-206ENST00000588361 SYCP2Q9BX26 1530 aa20.47■□□□□ 0.87
KDM4B-206ENST00000588361 SAMD9LQ8IVG5 1584 aa20.47■□□□□ 0.87
KDM4B-206ENST00000588361 CDCA7LQ96GN5 454 aa20.47■□□□□ 0.87
KDM4B-206ENST00000588361 KTN1Q86UP2 1357 aaKnown RBP20.46■□□□□ 0.87
KDM4B-206ENST00000588361 PLEKHH2Q8IVE3 1493 aa20.46■□□□□ 0.87
KDM4B-206ENST00000588361 ARHGEF12Q9NZN5 1544 aa20.46■□□□□ 0.87
KDM4B-206ENST00000588361 NLRP13Q86W25 1043 aa20.46■□□□□ 0.87
KDM4B-206ENST00000588361 BRD4O60885 1362 aaPredicted RBP20.45■□□□□ 0.86
KDM4B-206ENST00000588361 PRAG1Q86YV5 1406 aa20.44■□□□□ 0.86
KDM4B-206ENST00000588361 EXOC6Q8TAG9 804 aa20.44■□□□□ 0.86
KDM4B-206ENST00000588361 LAS1LQ9Y4W2 734 aaKnown RBP20.44■□□□□ 0.86
KDM4B-206ENST00000588361 DISP3Q9P2K9 1392 aa20.43■□□□□ 0.86
KDM4B-206ENST00000588361 PLA2R1Q13018 1463 aa20.42■□□□□ 0.86
KDM4B-206ENST00000588361 PER1O15534 1290 aaPredicted RBP20.42■□□□□ 0.86
KDM4B-206ENST00000588361 RCAN3Q9UKA8 241 aa20.42■□□□□ 0.86
KDM4B-206ENST00000588361 RNF123Q5XPI4 1314 aa20.41■□□□□ 0.86
KDM4B-206ENST00000588361 KDM5DQ9BY66 1539 aa20.41■□□□□ 0.86
KDM4B-206ENST00000588361 PLIN1O60240 522 aa20.4■□□□□ 0.86
KDM4B-206ENST00000588361 TESK2Q96S53 571 aa20.4■□□□□ 0.86
KDM4B-206ENST00000588361 LRPPRCP42704 1394 aaKnown RBP20.4■□□□□ 0.86
KDM4B-206ENST00000588361 CDC42BPBQ9Y5S2 1711 aa20.4■□□□□ 0.86
KDM4B-206ENST00000588361 RRP1P56182 461 aaKnown RBP20.4■□□□□ 0.86
KDM4B-206ENST00000588361 ARHGEF5Q12774 1597 aa20.39■□□□□ 0.86
KDM4B-206ENST00000588361 AFAP1Q8N556 730 aa20.39■□□□□ 0.85
KDM4B-206ENST00000588361 TMF1P82094 1093 aa20.38■□□□□ 0.85
KDM4B-206ENST00000588361 A2MP01023 1474 aa20.38■□□□□ 0.85
KDM4B-206ENST00000588361 TTC37Q6PGP7 1564 aa20.37■□□□□ 0.85
KDM4B-206ENST00000588361 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
KDM4B-206ENST00000588361 EFCAB2Q5VUJ9 269 aa20.36■□□□□ 0.85
KDM4B-206ENST00000588361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.35■□□□□ 0.852e-6■■■□□ 18.1
KDM4B-206ENST00000588361 PARD3Q8TEW0 1356 aa20.34■□□□□ 0.85
KDM4B-206ENST00000588361 PREX2Q70Z35 1606 aa20.34■□□□□ 0.85
KDM4B-206ENST00000588361 NEFMP07197 916 aa20.32■□□□□ 0.84
KDM4B-206ENST00000588361 ERBINQ96RT1 1412 aa20.32■□□□□ 0.84
KDM4B-206ENST00000588361 SKAP1Q86WV1 359 aa20.31■□□□□ 0.84
KDM4B-206ENST00000588361 ADAMTS8Q9UP79 889 aa20.29■□□□□ 0.84
KDM4B-206ENST00000588361 KNSTRNQ9Y448 316 aa20.29■□□□□ 0.84
KDM4B-206ENST00000588361 SPAG9O60271 1321 aaKnown RBP20.29■□□□□ 0.84
KDM4B-206ENST00000588361 TRAPPC8Q9Y2L5 1435 aa20.28■□□□□ 0.84
KDM4B-206ENST00000588361 TRPM1Q7Z4N2 1603 aa20.28■□□□□ 0.84
KDM4B-206ENST00000588361 GPRASP1Q5JY77 1395 aa20.26■□□□□ 0.83
KDM4B-206ENST00000588361 COL17A1Q9UMD9 1497 aaPredicted RBP20.25■□□□□ 0.83
KDM4B-206ENST00000588361 CHD1O14646 1710 aa20.25■□□□□ 0.83
KDM4B-206ENST00000588361 PDE3BQ13370 1112 aa20.24■□□□□ 0.83
KDM4B-206ENST00000588361 WDR43Q15061 677 aaKnown RBP eCLIP20.24■□□□□ 0.834e-6■■□□□ 14
KDM4B-206ENST00000588361 BRPF3Q9ULD4 1205 aa20.23■□□□□ 0.83
KDM4B-206ENST00000588361 KIF3BO15066 747 aa20.23■□□□□ 0.83
KDM4B-206ENST00000588361 CRBNQ96SW2 442 aa20.22■□□□□ 0.83
KDM4B-206ENST00000588361 PLCH2O75038 1416 aa20.21■□□□□ 0.83
KDM4B-206ENST00000588361 C20orf194Q5TEA3 1177 aa20.21■□□□□ 0.83
KDM4B-206ENST00000588361 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
KDM4B-206ENST00000588361 ABCC2Q92887 1545 aa20.21■□□□□ 0.83
KDM4B-206ENST00000588361 PPP2R1AP30153 589 aa20.2■□□□□ 0.82
KDM4B-206ENST00000588361 DUOX2Q9NRD8 1548 aa20.2■□□□□ 0.82
KDM4B-206ENST00000588361 EIF5BO60841 1220 aaKnown RBP20.2■□□□□ 0.82
KDM4B-206ENST00000588361 E9PCH4 1651 aa20.19■□□□□ 0.82
KDM4B-206ENST00000588361 WASHC2CQ9Y4E1 1318 aa20.19■□□□□ 0.82
KDM4B-206ENST00000588361 UNC13BO14795 1591 aa20.19■□□□□ 0.82
KDM4B-206ENST00000588361 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
KDM4B-206ENST00000588361 PRDM15P57071 1507 aaPredicted RBP20.17■□□□□ 0.82
KDM4B-206ENST00000588361 CFAP70Q5T0N1 1121 aa20.17■□□□□ 0.82
KDM4B-206ENST00000588361 MYO5CQ9NQX4 1742 aa20.16■□□□□ 0.82
KDM4B-206ENST00000588361 PDE4AP27815 886 aa20.16■□□□□ 0.82
KDM4B-206ENST00000588361 MAGI2Q86UL8 1455 aa20.16■□□□□ 0.82
KDM4B-206ENST00000588361 IQGAP3Q86VI3 1631 aa20.15■□□□□ 0.82
KDM4B-206ENST00000588361 MAST1Q9Y2H9 1570 aa20.14■□□□□ 0.82
KDM4B-206ENST00000588361 AMER1Q5JTC6 1135 aaPredicted RBP20.14■□□□□ 0.82
KDM4B-206ENST00000588361 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.82
KDM4B-206ENST00000588361 SLC4A3P48751 1232 aa20.13■□□□□ 0.81
KDM4B-206ENST00000588361 TCERG1O14776 1098 aaKnown RBP20.12■□□□□ 0.81
KDM4B-206ENST00000588361 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
KDM4B-206ENST00000588361 TNNT2P45379 298 aaPredicted RBP20.11■□□□□ 0.81
KDM4B-206ENST00000588361 CDCA8Q53HL2 280 aa20.11■□□□□ 0.81
KDM4B-206ENST00000588361 PLEKHH1Q9ULM0 1364 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms