RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-209ENST00000588087 ANP32EQ9BTT0 268 aa29.31■■■□□ 2.28
TMC6-209ENST00000588087 ERCC6L2Q5T890 1561 aa29.31■■■□□ 2.28
TMC6-209ENST00000588087 RSPH4AQ5TD94 716 aa29.31■■■□□ 2.28
TMC6-209ENST00000588087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.29■■■□□ 2.282e-7■■□□□ 14.2
TMC6-209ENST00000588087 CCDC144AA2RUR9 1427 aa29.29■■■□□ 2.28
TMC6-209ENST00000588087 ERICH6BQ5W0A0 696 aa29.29■■■□□ 2.28
TMC6-209ENST00000588087 B4GALNT3Q6L9W6 998 aa29.28■■■□□ 2.28
TMC6-209ENST00000588087 TMC1Q8TDI8 760 aa29.26■■■□□ 2.27
TMC6-209ENST00000588087 PNISRQ8TF01 805 aaKnown RBP29.25■■■□□ 2.27
TMC6-209ENST00000588087 PLA2R1Q13018 1463 aa29.25■■■□□ 2.27
TMC6-209ENST00000588087 NBPF1Q3BBV0 1214 aa29.24■■■□□ 2.27
TMC6-209ENST00000588087 PRAG1Q86YV5 1406 aa29.24■■■□□ 2.27
TMC6-209ENST00000588087 PLEKHH2Q8IVE3 1493 aa29.23■■■□□ 2.27
TMC6-209ENST00000588087 SMG6Q86US8 1419 aaKnown RBP29.22■■■□□ 2.27
TMC6-209ENST00000588087 SHROOM2Q13796 1616 aa29.2■■■□□ 2.26
TMC6-209ENST00000588087 ABCC2Q92887 1545 aa29.19■■■□□ 2.26
TMC6-209ENST00000588087 NUDCQ9Y266 331 aa29.19■■■□□ 2.26
TMC6-209ENST00000588087 UNC13BO14795 1591 aa29.17■■■□□ 2.26
TMC6-209ENST00000588087 MAST1Q9Y2H9 1570 aa29.17■■■□□ 2.26
TMC6-209ENST00000588087 A2MP01023 1474 aa29.17■■■□□ 2.26
TMC6-209ENST00000588087 MYBBP1AQ9BQG0 1328 aaKnown RBP29.14■■■□□ 2.26
TMC6-209ENST00000588087 TRPM1Q7Z4N2 1603 aa29.12■■■□□ 2.25
TMC6-209ENST00000588087 MSH5O43196 834 aa29.11■■■□□ 2.25
TMC6-209ENST00000588087 RALBP1Q15311 655 aa29.1■■■□□ 2.25
TMC6-209ENST00000588087 MYO5CQ9NQX4 1742 aa29.1■■■□□ 2.25
TMC6-209ENST00000588087 PLXNC1O60486 1568 aa29.09■■■□□ 2.25
TMC6-209ENST00000588087 BRD4O60885 1362 aaPredicted RBP29.09■■■□□ 2.25
TMC6-209ENST00000588087 LRPPRCP42704 1394 aaKnown RBP29.07■■■□□ 2.24
TMC6-209ENST00000588087 E9PCH4 1651 aa29.07■■■□□ 2.24
TMC6-209ENST00000588087 IQGAP3Q86VI3 1631 aa29.06■■■□□ 2.24
TMC6-209ENST00000588087 GPRASP1Q5JY77 1395 aa29.06■■■□□ 2.24
TMC6-209ENST00000588087 DUOX2Q9NRD8 1548 aa29.05■■■□□ 2.24
TMC6-209ENST00000588087 DISP3Q9P2K9 1392 aa29.05■■■□□ 2.24
TMC6-209ENST00000588087 PLCH2O75038 1416 aa29.05■■■□□ 2.24
TMC6-209ENST00000588087 EFCAB2Q5VUJ9 269 aa29.04■■■□□ 2.24
TMC6-209ENST00000588087 TRAPPC8Q9Y2L5 1435 aa29.04■■■□□ 2.24
TMC6-209ENST00000588087 TESK2Q96S53 571 aa29.03■■■□□ 2.24
TMC6-209ENST00000588087 RNF123Q5XPI4 1314 aa29.02■■■□□ 2.24
TMC6-209ENST00000588087 KTN1Q86UP2 1357 aaKnown RBP29.02■■■□□ 2.24
TMC6-209ENST00000588087 SALL2Q9Y467 1007 aaPredicted RBP29.02■■■□□ 2.24
TMC6-209ENST00000588087 ERBINQ96RT1 1412 aa29.01■■■□□ 2.23
TMC6-209ENST00000588087 PER1O15534 1290 aaPredicted RBP28.99■■■□□ 2.23
TMC6-209ENST00000588087 COL17A1Q9UMD9 1497 aaPredicted RBP28.99■■■□□ 2.23
TMC6-209ENST00000588087 PARD3Q8TEW0 1356 aa28.99■■■□□ 2.23
TMC6-209ENST00000588087 FANCIQ9NVI1 1328 aa28.99■■■□□ 2.23
TMC6-209ENST00000588087 MAGI2Q86UL8 1455 aa28.99■■■□□ 2.23
TMC6-209ENST00000588087 ZCCHC11Q5TAX3 1644 aaKnown RBP28.99■■■□□ 2.23
TMC6-209ENST00000588087 CC2D1BQ5T0F9 858 aaKnown RBP28.98■■■□□ 2.23
TMC6-209ENST00000588087 NLRP13Q86W25 1043 aa28.98■■■□□ 2.23
TMC6-209ENST00000588087 PRDM15P57071 1507 aaPredicted RBP28.97■■■□□ 2.23
TMC6-209ENST00000588087 ABCC1P33527 1531 aa28.95■■■□□ 2.23
TMC6-209ENST00000588087 AFAP1Q8N556 730 aa28.95■■■□□ 2.23
TMC6-209ENST00000588087 PANK3Q9H999 370 aa28.94■■■□□ 2.22
TMC6-209ENST00000588087 ATP10AO60312 1499 aa28.94■■■□□ 2.22
TMC6-209ENST00000588087 CCDC136Q96JN2 1154 aa28.92■■■□□ 2.22
TMC6-209ENST00000588087 SPAG9O60271 1321 aaKnown RBP28.92■■■□□ 2.22
TMC6-209ENST00000588087 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.22
TMC6-209ENST00000588087 TMF1P82094 1093 aa28.89■■■□□ 2.21
TMC6-209ENST00000588087 LAMC1P11047 1609 aa28.88■■■□□ 2.21
TMC6-209ENST00000588087 EIF2AK4Q9P2K8 1649 aaKnown RBP28.88■■■□□ 2.21
TMC6-209ENST00000588087 UHRF1BP1LA0JNW5 1464 aa28.88■■■□□ 2.21
TMC6-209ENST00000588087 RRP1P56182 461 aaKnown RBP28.81■■■□□ 2.2
TMC6-209ENST00000588087 CDCA7LQ96GN5 454 aa28.81■■■□□ 2.2
TMC6-209ENST00000588087 ZFYVE16Q7Z3T8 1539 aa28.8■■■□□ 2.2
TMC6-209ENST00000588087 RCAN3Q9UKA8 241 aa28.79■■■□□ 2.2
TMC6-209ENST00000588087 WASHC2CQ9Y4E1 1318 aa28.78■■■□□ 2.2
TMC6-209ENST00000588087 RNF17Q9BXT8 1623 aaKnown RBP28.78■■■□□ 2.2
TMC6-209ENST00000588087 ERICH6Q7L0X2 663 aa28.76■■■□□ 2.19
TMC6-209ENST00000588087 MYT1LQ9UL68 1186 aa28.76■■■□□ 2.19
TMC6-209ENST00000588087 RTEL1-TNFRSF6BF6WH68 1400 aa28.75■■■□□ 2.19
TMC6-209ENST00000588087 EXOC6Q8TAG9 804 aa28.75■■■□□ 2.19
TMC6-209ENST00000588087 MADDQ8WXG6 1647 aa28.74■■■□□ 2.19
TMC6-209ENST00000588087 TRPM2O94759 1503 aa28.73■■■□□ 2.19
TMC6-209ENST00000588087 WDR7Q9Y4E6 1490 aa28.71■■■□□ 2.19
TMC6-209ENST00000588087 KIF3BO15066 747 aa28.7■■■□□ 2.19
TMC6-209ENST00000588087 PDE3BQ13370 1112 aa28.7■■■□□ 2.19
TMC6-209ENST00000588087 CLTCL1P53675 1640 aa28.7■■■□□ 2.19
TMC6-209ENST00000588087 PTPRTO14522 1441 aa28.7■■■□□ 2.18
TMC6-209ENST00000588087 FANCAO15360 1455 aa28.69■■■□□ 2.18
TMC6-209ENST00000588087 BLMP54132 1417 aaPredicted RBP28.69■■■□□ 2.18
TMC6-209ENST00000588087 KNSTRNQ9Y448 316 aa28.67■■■□□ 2.18
TMC6-209ENST00000588087 SCAPERQ9BY12 1400 aa28.67■■■□□ 2.18
TMC6-209ENST00000588087 ARAP3Q8WWN8 1544 aa28.66■■■□□ 2.18
TMC6-209ENST00000588087 ATP7AQ04656 1500 aa28.66■■■□□ 2.18
TMC6-209ENST00000588087 SCAF11Q99590 1463 aaKnown RBP28.65■■■□□ 2.18
TMC6-209ENST00000588087 ADAMTS8Q9UP79 889 aa28.65■■■□□ 2.18
TMC6-209ENST00000588087 KANK1Q14678 1352 aa28.64■■■□□ 2.18
TMC6-209ENST00000588087 IQGAP1P46940 1657 aa28.63■■■□□ 2.17
TMC6-209ENST00000588087 SPHKAPQ2M3C7 1700 aa28.63■■■□□ 2.17
TMC6-209ENST00000588087 PLIN1O60240 522 aa28.63■■■□□ 2.17
TMC6-209ENST00000588087 PPP2R1AP30153 589 aa28.62■■■□□ 2.17
TMC6-209ENST00000588087 AMER1Q5JTC6 1135 aaPredicted RBP28.62■■■□□ 2.17
TMC6-209ENST00000588087 DEPDC5O75140 1603 aa28.62■■■□□ 2.17
TMC6-209ENST00000588087 ADGRL1O94910 1474 aa28.61■■■□□ 2.17
TMC6-209ENST00000588087 UGGT1Q9NYU2 1555 aa28.6■■■□□ 2.17
TMC6-209ENST00000588087 INO80Q9ULG1 1556 aaPredicted RBP28.6■■■□□ 2.17
TMC6-209ENST00000588087 CEP152O94986 1710 aa28.59■■■□□ 2.17
TMC6-209ENST00000588087 TET3O43151 1660 aa28.59■■■□□ 2.17
TMC6-209ENST00000588087 ABCA9Q8IUA7 1624 aa28.58■■■□□ 2.17
TMC6-209ENST00000588087 CFAP70Q5T0N1 1121 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms