RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 GRXCR2A6NFK2 248 aa11.6□□□□□ -0.55
CACNA1A-208ENST00000587451 ADGRD1Q6QNK2 874 aa11.6□□□□□ -0.55
CACNA1A-208ENST00000587451 DMRTA1Q5VZB9 504 aa11.59□□□□□ -0.55
CACNA1A-208ENST00000587451 STAC3Q96MF2 364 aa11.59□□□□□ -0.55
CACNA1A-208ENST00000587451 PPP1R3GB7ZBB8 358 aa11.57□□□□□ -0.56
CACNA1A-208ENST00000587451 EN1Q05925 392 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-208ENST00000587451 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-208ENST00000587451 MAP3K7O43318 606 aa11.56□□□□□ -0.56
CACNA1A-208ENST00000587451 SLC4A5Q9BY07 1137 aa11.56□□□□□ -0.56
CACNA1A-208ENST00000587451 MYT1LQ9UL68 1186 aa11.56□□□□□ -0.56
CACNA1A-208ENST00000587451 C6orf132Q5T0Z8 1188 aa11.55□□□□□ -0.56
CACNA1A-208ENST00000587451 KDM2AQ9Y2K7 1162 aa11.55□□□□□ -0.56
CACNA1A-208ENST00000587451 RNF166Q96A37 237 aaPredicted RBP11.52□□□□□ -0.57
CACNA1A-208ENST00000587451 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
CACNA1A-208ENST00000587451 VPS9D1Q9Y2B5 631 aa11.52□□□□□ -0.57
CACNA1A-208ENST00000587451 CERKQ8TCT0 537 aa11.5□□□□□ -0.57
CACNA1A-208ENST00000587451 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
CACNA1A-208ENST00000587451 HRO43593 1189 aa11.48□□□□□ -0.57
CACNA1A-208ENST00000587451 OSBPP22059 807 aa11.48□□□□□ -0.57
CACNA1A-208ENST00000587451 COL9A1P20849 921 aa11.47□□□□□ -0.57
CACNA1A-208ENST00000587451 SMYD5Q6GMV2 418 aa11.47□□□□□ -0.57
CACNA1A-208ENST00000587451 TSR1Q2NL82 804 aaKnown RBP11.46□□□□□ -0.57
CACNA1A-208ENST00000587451 ONECUT3O60422 494 aaPredicted RBP11.45□□□□□ -0.58
CACNA1A-208ENST00000587451 MLLT3P42568 568 aaPredicted RBP11.45□□□□□ -0.58
CACNA1A-208ENST00000587451 RABGEF1Q9UJ41 708 aa11.45□□□□□ -0.58
CACNA1A-208ENST00000587451 GOLGA8CPA6NN73 597 aa11.44□□□□□ -0.58
CACNA1A-208ENST00000587451 SEMA3EO15041 775 aa11.44□□□□□ -0.58
CACNA1A-208ENST00000587451 MRPL50Q8N5N7 158 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-208ENST00000587451 PROX2Q3B8N5 592 aa11.42□□□□□ -0.58
CACNA1A-208ENST00000587451 TRIM6-TRIM34B2RNG4 842 aa11.41□□□□□ -0.58
CACNA1A-208ENST00000587451 BHMG1C9JSJ3 638 aaPredicted RBP11.4□□□□□ -0.58
CACNA1A-208ENST00000587451 PRIM1P49642 420 aaKnown RBP11.4□□□□□ -0.58
CACNA1A-208ENST00000587451 PACS2Q86VP3 889 aa11.4□□□□□ -0.58
CACNA1A-208ENST00000587451 TULP1O00294 542 aaPredicted RBP11.39□□□□□ -0.59
CACNA1A-208ENST00000587451 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-208ENST00000587451 PRSS12P56730 875 aa11.38□□□□□ -0.59
CACNA1A-208ENST00000587451 KIAA1468Q9P260 1216 aa11.38□□□□□ -0.59
CACNA1A-208ENST00000587451 RBM27Q9P2N5 1060 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-208ENST00000587451 LAPTM4BQ86VI4 370 aa11.37□□□□□ -0.59
CACNA1A-208ENST00000587451 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
CACNA1A-208ENST00000587451 CDHR5Q9HBB8 845 aa11.37□□□□□ -0.59
CACNA1A-208ENST00000587451 KCTD12Q96CX2 325 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-208ENST00000587451 NUTM2FA1L443 756 aa11.35□□□□□ -0.59
CACNA1A-208ENST00000587451 NBPF26B4DH59 902 aa11.34□□□□□ -0.59
CACNA1A-208ENST00000587451 WNT2BQ93097 391 aa11.33□□□□□ -0.6
CACNA1A-208ENST00000587451 HCSTQ9UBK5 93 aa11.33□□□□□ -0.6
CACNA1A-208ENST00000587451 ANKK1Q8NFD2 765 aa11.32□□□□□ -0.6
CACNA1A-208ENST00000587451 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
CACNA1A-208ENST00000587451 FAM98CQ17RN3 349 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-208ENST00000587451 FCHSD2O94868 740 aa11.3□□□□□ -0.6
CACNA1A-208ENST00000587451 SEPT9Q9UHD8 586 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-208ENST00000587451 PTGDRQ13258 359 aa11.29□□□□□ -0.6
CACNA1A-208ENST00000587451 NPDC1Q9NQX5 325 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-208ENST00000587451 PADI6Q6TGC4 694 aa11.28□□□□□ -0.6
CACNA1A-208ENST00000587451 ZFRQ96KR1 1074 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-208ENST00000587451 PNMA3Q9UL41 463 aa11.28□□□□□ -0.6
CACNA1A-208ENST00000587451 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
CACNA1A-208ENST00000587451 TATDN2Q93075 761 aa11.27□□□□□ -0.61
CACNA1A-208ENST00000587451 RBM26Q5T8P6 1007 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-208ENST00000587451 HDGFP51858 240 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-208ENST00000587451 PTPN5P54829 565 aa11.24□□□□□ -0.61
CACNA1A-208ENST00000587451 HIC1Q14526 733 aa11.24□□□□□ -0.61
CACNA1A-208ENST00000587451 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
CACNA1A-208ENST00000587451 TTC13Q8NBP0 860 aa11.24□□□□□ -0.61
CACNA1A-208ENST00000587451 LRCH3Q96II8 777 aa11.24□□□□□ -0.61
CACNA1A-208ENST00000587451 FAM198AQ9UFP1 575 aa11.23□□□□□ -0.61
CACNA1A-208ENST00000587451 SMAPO00193 183 aa11.22□□□□□ -0.61
CACNA1A-208ENST00000587451 GPIHBP1Q8IV16 184 aa11.22□□□□□ -0.61
CACNA1A-208ENST00000587451 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-208ENST00000587451 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
CACNA1A-208ENST00000587451 SLC24A1O60721 1099 aa11.21□□□□□ -0.61
CACNA1A-208ENST00000587451 SLC4A3P48751 1232 aa11.2□□□□□ -0.62
CACNA1A-208ENST00000587451 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
CACNA1A-208ENST00000587451 GNPATO15228 680 aa11.18□□□□□ -0.62
CACNA1A-208ENST00000587451 BCAMP50895 628 aa11.18□□□□□ -0.62
CACNA1A-208ENST00000587451 NYAP1Q6ZVC0 841 aa11.18□□□□□ -0.62
CACNA1A-208ENST00000587451 NECTIN2Q92692 538 aa11.16□□□□□ -0.62
CACNA1A-208ENST00000587451 TSR3Q9UJK0 312 aaKnown RBP11.16□□□□□ -0.62
CACNA1A-208ENST00000587451 SAMD7Q7Z3H4 446 aa11.15□□□□□ -0.62
CACNA1A-208ENST00000587451 HPS5Q9UPZ3 1129 aa11.15□□□□□ -0.62
CACNA1A-208ENST00000587451 OATP04181 439 aa11.14□□□□□ -0.63
CACNA1A-208ENST00000587451 EYA1Q99502 592 aa11.14□□□□□ -0.63
CACNA1A-208ENST00000587451 ADGRG1Q9Y653 693 aa11.14□□□□□ -0.63
CACNA1A-208ENST00000587451 C3orf80F5H4A9 247 aa11.13□□□□□ -0.63
CACNA1A-208ENST00000587451 RNF40O75150 1001 aa11.13□□□□□ -0.63
CACNA1A-208ENST00000587451 DNAJB2P25686 324 aa11.13□□□□□ -0.63
CACNA1A-208ENST00000587451 PPP4CP60510 307 aa11.13□□□□□ -0.63
CACNA1A-208ENST00000587451 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
CACNA1A-208ENST00000587451 GPR37O15354 613 aa11.11□□□□□ -0.63
CACNA1A-208ENST00000587451 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
CACNA1A-208ENST00000587451 PLA2G2EQ9NZK7 142 aa11.1□□□□□ -0.63
CACNA1A-208ENST00000587451 SWT1Q5T5J6 900 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-208ENST00000587451 LMOD2Q6P5Q4 547 aa11.09□□□□□ -0.63
CACNA1A-208ENST00000587451 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.09□□□□□ -0.63
CACNA1A-208ENST00000587451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-208ENST00000587451 RCCD1A6NED2 376 aa11.06□□□□□ -0.64
CACNA1A-208ENST00000587451 FAM161AQ3B820 660 aa11.06□□□□□ -0.64
CACNA1A-208ENST00000587451 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
CACNA1A-208ENST00000587451 TMEM134Q9H6X4 195 aa11.06□□□□□ -0.64
CACNA1A-208ENST00000587451 METTL3Q86U44 580 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms