RNA–Protein interactions for RNA: ENST00000586751.5

LAMA3-206, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 3,494 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-206ENST00000586751 SALL2Q9Y467 1007 aaPredicted RBP12.24□□□□□ -0.45
LAMA3-206ENST00000586751 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
LAMA3-206ENST00000586751 PLA2R1Q13018 1463 aa12.23□□□□□ -0.45
LAMA3-206ENST00000586751 CARD11Q9BXL7 1154 aa12.22□□□□□ -0.45
LAMA3-206ENST00000586751 KIF15Q9NS87 1388 aa12.22□□□□□ -0.45
LAMA3-206ENST00000586751 ERICH6BQ5W0A0 696 aa12.21□□□□□ -0.45
LAMA3-206ENST00000586751 KLHL34Q8N239 644 aa12.21□□□□□ -0.45
LAMA3-206ENST00000586751 DCAF11Q8TEB1 546 aa12.21□□□□□ -0.45
LAMA3-206ENST00000586751 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.45
LAMA3-206ENST00000586751 NBPF1Q3BBV0 1214 aa12.21□□□□□ -0.46
LAMA3-206ENST00000586751 LRPPRCP42704 1394 aaKnown RBP12.2□□□□□ -0.46
LAMA3-206ENST00000586751 FAM135AQ9P2D6 1515 aa12.2□□□□□ -0.46
LAMA3-206ENST00000586751 TRPM1Q7Z4N2 1603 aa12.2□□□□□ -0.46
LAMA3-206ENST00000586751 NUDCQ9Y266 331 aa12.2□□□□□ -0.46
LAMA3-206ENST00000586751 CARMIL2Q6F5E8 1435 aa12.2□□□□□ -0.46
LAMA3-206ENST00000586751 PLEKHD1A6NEE1 506 aa12.2□□□□□ -0.46
LAMA3-206ENST00000586751 ARHGEF5Q12774 1597 aa12.19□□□□□ -0.46
LAMA3-206ENST00000586751 TTC37Q6PGP7 1564 aa12.19□□□□□ -0.46
LAMA3-206ENST00000586751 PREX2Q70Z35 1606 aa12.18□□□□□ -0.46
LAMA3-206ENST00000586751 ERCC6L2Q5T890 1561 aa12.17□□□□□ -0.46
LAMA3-206ENST00000586751 PRAG1Q86YV5 1406 aa12.17□□□□□ -0.46
LAMA3-206ENST00000586751 SYCP2Q9BX26 1530 aa12.17□□□□□ -0.46
LAMA3-206ENST00000586751 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-206ENST00000586751 A2MP01023 1474 aa12.16□□□□□ -0.46
LAMA3-206ENST00000586751 PER1O15534 1290 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-206ENST00000586751 ARID4BQ4LE39 1312 aaPredicted RBP12.15□□□□□ -0.46
LAMA3-206ENST00000586751 MYO5CQ9NQX4 1742 aa12.15□□□□□ -0.46
LAMA3-206ENST00000586751 DISP3Q9P2K9 1392 aa12.15□□□□□ -0.47
LAMA3-206ENST00000586751 RGL3Q3MIN7 710 aa12.14□□□□□ -0.47
LAMA3-206ENST00000586751 ROCK2O75116 1388 aaKnown RBP12.14□□□□□ -0.47
LAMA3-206ENST00000586751 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
LAMA3-206ENST00000586751 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.14□□□□□ -0.47
LAMA3-206ENST00000586751 TMC1Q8TDI8 760 aa12.13□□□□□ -0.47
LAMA3-206ENST00000586751 TSPY4P0CV99 314 aa12.13□□□□□ -0.47
LAMA3-206ENST00000586751 TSPY10P0CW01 314 aa12.13□□□□□ -0.47
LAMA3-206ENST00000586751 TESK2Q96S53 571 aa12.13□□□□□ -0.47
LAMA3-206ENST00000586751 UNC13BO14795 1591 aa12.12□□□□□ -0.47
LAMA3-206ENST00000586751 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
LAMA3-206ENST00000586751 PARD3Q8TEW0 1356 aa12.12□□□□□ -0.47
LAMA3-206ENST00000586751 PLEKHH2Q8IVE3 1493 aa12.12□□□□□ -0.47
LAMA3-206ENST00000586751 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
LAMA3-206ENST00000586751 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
LAMA3-206ENST00000586751 CHD1O14646 1710 aa12.11□□□□□ -0.47
LAMA3-206ENST00000586751 SKAP1Q86WV1 359 aa12.1□□□□□ -0.47
LAMA3-206ENST00000586751 BRD4O60885 1362 aaPredicted RBP12.1□□□□□ -0.47
LAMA3-206ENST00000586751 PRDM15P57071 1507 aaPredicted RBP12.1□□□□□ -0.47
LAMA3-206ENST00000586751 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
LAMA3-206ENST00000586751 EXOC6Q8TAG9 804 aa12.09□□□□□ -0.47
LAMA3-206ENST00000586751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.09□□□□□ -0.47
LAMA3-206ENST00000586751 GPRASP1Q5JY77 1395 aa12.08□□□□□ -0.47
LAMA3-206ENST00000586751 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.48
LAMA3-206ENST00000586751 MAST1Q9Y2H9 1570 aa12.08□□□□□ -0.48
LAMA3-206ENST00000586751 IQGAP3Q86VI3 1631 aa12.08□□□□□ -0.48
LAMA3-206ENST00000586751 CCDC144AA2RUR9 1427 aa12.08□□□□□ -0.48
LAMA3-206ENST00000586751 ARHGAP5Q13017 1502 aa12.07□□□□□ -0.48
LAMA3-206ENST00000586751 PLPPR3Q6T4P5 718 aa12.07□□□□□ -0.48
LAMA3-206ENST00000586751 CC2D1BQ5T0F9 858 aaKnown RBP12.06□□□□□ -0.48
LAMA3-206ENST00000586751 RRP1P56182 461 aaKnown RBP12.06□□□□□ -0.48
LAMA3-206ENST00000586751 SHROOM2Q13796 1616 aa12.06□□□□□ -0.48
LAMA3-206ENST00000586751 RALBP1Q15311 655 aa12.05□□□□□ -0.48
LAMA3-206ENST00000586751 PLIN1O60240 522 aa12.05□□□□□ -0.48
LAMA3-206ENST00000586751 PLXNC1O60486 1568 aa12.05□□□□□ -0.48
LAMA3-206ENST00000586751 MAGI2Q86UL8 1455 aa12.05□□□□□ -0.48
LAMA3-206ENST00000586751 PDE4CQ08493 712 aa12.05□□□□□ -0.48
LAMA3-206ENST00000586751 LAMC1P11047 1609 aa12.04□□□□□ -0.48
LAMA3-206ENST00000586751 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
LAMA3-206ENST00000586751 PANK3Q9H999 370 aa12.04□□□□□ -0.48
LAMA3-206ENST00000586751 PDIA4P13667 645 aaKnown RBP12.03□□□□□ -0.48
LAMA3-206ENST00000586751 A0A0U1RQG5 324 aaPredicted RBP12.02□□□□□ -0.48
LAMA3-206ENST00000586751 NLRP13Q86W25 1043 aa12.02□□□□□ -0.48
LAMA3-206ENST00000586751 ERBINQ96RT1 1412 aa12.02□□□□□ -0.48
LAMA3-206ENST00000586751 BLMP54132 1417 aaPredicted RBP12.02□□□□□ -0.49
LAMA3-206ENST00000586751 TRAPPC8Q9Y2L5 1435 aa12.02□□□□□ -0.49
LAMA3-206ENST00000586751 WDR7Q9Y4E6 1490 aa12.02□□□□□ -0.49
LAMA3-206ENST00000586751 KTN1Q86UP2 1357 aaKnown RBP12.02□□□□□ -0.49
LAMA3-206ENST00000586751 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
LAMA3-206ENST00000586751 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
LAMA3-206ENST00000586751 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
LAMA3-206ENST00000586751 ATP10AO60312 1499 aa12□□□□□ -0.49
LAMA3-206ENST00000586751 MADDQ8WXG6 1647 aa12□□□□□ -0.49
LAMA3-206ENST00000586751 ABCC2Q92887 1545 aa11.99□□□□□ -0.49
LAMA3-206ENST00000586751 IQGAP1P46940 1657 aa11.99□□□□□ -0.49
LAMA3-206ENST00000586751 NBR1Q14596 966 aa11.99□□□□□ -0.49
LAMA3-206ENST00000586751 ZCCHC11Q5TAX3 1644 aaKnown RBP11.98□□□□□ -0.49
LAMA3-206ENST00000586751 MYOM1P52179 1685 aa11.98□□□□□ -0.49
LAMA3-206ENST00000586751 DUOX2Q9NRD8 1548 aa11.98□□□□□ -0.49
LAMA3-206ENST00000586751 PLEKHH1Q9ULM0 1364 aa11.98□□□□□ -0.49
LAMA3-206ENST00000586751 ADAMTS8Q9UP79 889 aa11.97□□□□□ -0.49
LAMA3-206ENST00000586751 ABCC1P33527 1531 aa11.97□□□□□ -0.49
LAMA3-206ENST00000586751 CLTCL1P53675 1640 aa11.96□□□□□ -0.49
LAMA3-206ENST00000586751 RSPH4AQ5TD94 716 aa11.96□□□□□ -0.49
LAMA3-206ENST00000586751 EIF2AK4Q9P2K8 1649 aaKnown RBP11.96□□□□□ -0.5
LAMA3-206ENST00000586751 IPO9Q96P70 1041 aaKnown RBP11.95□□□□□ -0.5
LAMA3-206ENST00000586751 PLCH2O75038 1416 aa11.95□□□□□ -0.5
LAMA3-206ENST00000586751 ZMYM4Q5VZL5 1548 aa11.95□□□□□ -0.5
LAMA3-206ENST00000586751 AFAP1Q8N556 730 aa11.95□□□□□ -0.5
LAMA3-206ENST00000586751 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
LAMA3-206ENST00000586751 CRBNQ96SW2 442 aa11.95□□□□□ -0.5
LAMA3-206ENST00000586751 RTN4Q9NQC3 1192 aaKnown RBP11.95□□□□□ -0.5
LAMA3-206ENST00000586751 SPHKAPQ2M3C7 1700 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms