RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 RNF166Q96A37 237 aaPredicted RBP10.63□□□□□ -0.71
ZNF560-202ENST00000585974 HRO43593 1189 aa10.62□□□□□ -0.71
ZNF560-202ENST00000585974 DDX12PQ92771 950 aa10.62□□□□□ -0.71
ZNF560-202ENST00000585974 STAC3Q96MF2 364 aa10.62□□□□□ -0.71
ZNF560-202ENST00000585974 VPS9D1Q9Y2B5 631 aa10.62□□□□□ -0.71
ZNF560-202ENST00000585974 ONECUT3O60422 494 aaPredicted RBP10.61□□□□□ -0.71
ZNF560-202ENST00000585974 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
ZNF560-202ENST00000585974 ZBED2Q9BTP6 218 aa10.61□□□□□ -0.71
ZNF560-202ENST00000585974 C6orf132Q5T0Z8 1188 aa10.6□□□□□ -0.71
ZNF560-202ENST00000585974 KCNV2Q8TDN2 545 aa10.59□□□□□ -0.71
ZNF560-202ENST00000585974 EN1Q05925 392 aaPredicted RBP10.58□□□□□ -0.72
ZNF560-202ENST00000585974 NBR1Q14596 966 aa10.58□□□□□ -0.72
ZNF560-202ENST00000585974 VSIG10Q8N0Z9 540 aa10.57□□□□□ -0.72
ZNF560-202ENST00000585974 CERKQ8TCT0 537 aa10.57□□□□□ -0.72
ZNF560-202ENST00000585974 GRXCR2A6NFK2 248 aa10.55□□□□□ -0.72
ZNF560-202ENST00000585974 BHMG1C9JSJ3 638 aaPredicted RBP10.55□□□□□ -0.72
ZNF560-202ENST00000585974 NBPF3Q9H094 633 aa10.55□□□□□ -0.72
ZNF560-202ENST00000585974 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
ZNF560-202ENST00000585974 MAP3K7O43318 606 aa10.54□□□□□ -0.72
ZNF560-202ENST00000585974 RBM33Q96EV2 1170 aaKnown RBP10.54□□□□□ -0.72
ZNF560-202ENST00000585974 COL9A1P20849 921 aa10.52□□□□□ -0.73
ZNF560-202ENST00000585974 OSBPP22059 807 aa10.52□□□□□ -0.73
ZNF560-202ENST00000585974 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
ZNF560-202ENST00000585974 LAPTM4BQ86VI4 370 aa10.49□□□□□ -0.73
ZNF560-202ENST00000585974 HCSTQ9UBK5 93 aa10.49□□□□□ -0.73
ZNF560-202ENST00000585974 TRIM6-TRIM34B2RNG4 842 aa10.48□□□□□ -0.73
ZNF560-202ENST00000585974 GOLGA8CPA6NN73 597 aa10.47□□□□□ -0.73
ZNF560-202ENST00000585974 KDM2AQ9Y2K7 1162 aa10.47□□□□□ -0.73
ZNF560-202ENST00000585974 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.73
ZNF560-202ENST00000585974 PACS2Q86VP3 889 aa10.46□□□□□ -0.73
ZNF560-202ENST00000585974 RBM27Q9P2N5 1060 aaKnown RBP10.46□□□□□ -0.73
ZNF560-202ENST00000585974 PROX2Q3B8N5 592 aa10.45□□□□□ -0.74
ZNF560-202ENST00000585974 SMYD5Q6GMV2 418 aa10.45□□□□□ -0.74
ZNF560-202ENST00000585974 KIAA1468Q9P260 1216 aa10.45□□□□□ -0.74
ZNF560-202ENST00000585974 PRSS12P56730 875 aa10.44□□□□□ -0.74
ZNF560-202ENST00000585974 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
ZNF560-202ENST00000585974 MLLT3P42568 568 aaPredicted RBP10.42□□□□□ -0.74
ZNF560-202ENST00000585974 KCTD12Q96CX2 325 aaKnown RBP10.42□□□□□ -0.74
ZNF560-202ENST00000585974 CDCA7LQ96GN5 454 aa10.42□□□□□ -0.74
ZNF560-202ENST00000585974 WNT2BQ93097 391 aa10.4□□□□□ -0.74
ZNF560-202ENST00000585974 TESPA1A2RU30 521 aaPredicted RBP10.39□□□□□ -0.75
ZNF560-202ENST00000585974 SEMA3EO15041 775 aa10.39□□□□□ -0.75
ZNF560-202ENST00000585974 FAM98CQ17RN3 349 aaKnown RBP10.39□□□□□ -0.75
ZNF560-202ENST00000585974 ANKK1Q8NFD2 765 aa10.39□□□□□ -0.75
ZNF560-202ENST00000585974 THSD4Q6ZMP0 1018 aa10.38□□□□□ -0.75
ZNF560-202ENST00000585974 NPDC1Q9NQX5 325 aaPredicted RBP10.38□□□□□ -0.75
ZNF560-202ENST00000585974 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
ZNF560-202ENST00000585974 TTC13Q8NBP0 860 aa10.37□□□□□ -0.75
ZNF560-202ENST00000585974 NBPF26B4DH59 902 aa10.36□□□□□ -0.75
ZNF560-202ENST00000585974 ZFRQ96KR1 1074 aaKnown RBP10.36□□□□□ -0.75
ZNF560-202ENST00000585974 CDHR5Q9HBB8 845 aa10.36□□□□□ -0.75
ZNF560-202ENST00000585974 NYAP1Q6ZVC0 841 aa10.34□□□□□ -0.75
ZNF560-202ENST00000585974 SOWAHBA6NEL2 793 aa10.33□□□□□ -0.76
ZNF560-202ENST00000585974 PTGDRQ13258 359 aa10.33□□□□□ -0.76
ZNF560-202ENST00000585974 TATDN2Q93075 761 aa10.33□□□□□ -0.76
ZNF560-202ENST00000585974 FCHSD2O94868 740 aa10.32□□□□□ -0.76
ZNF560-202ENST00000585974 SEPT9Q9UHD8 586 aaPredicted RBP10.32□□□□□ -0.76
ZNF560-202ENST00000585974 NUTM2FA1L443 756 aa10.31□□□□□ -0.76
ZNF560-202ENST00000585974 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
ZNF560-202ENST00000585974 FAM198AQ9UFP1 575 aa10.31□□□□□ -0.76
ZNF560-202ENST00000585974 HDGFP51858 240 aaKnown RBP10.3□□□□□ -0.76
ZNF560-202ENST00000585974 PNMA3Q9UL41 463 aa10.3□□□□□ -0.76
ZNF560-202ENST00000585974 PTPN5P54829 565 aa10.29□□□□□ -0.76
ZNF560-202ENST00000585974 PADI6Q6TGC4 694 aa10.29□□□□□ -0.76
ZNF560-202ENST00000585974 LRCH3Q96II8 777 aa10.29□□□□□ -0.76
ZNF560-202ENST00000585974 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.29□□□□□ -0.76
ZNF560-202ENST00000585974 HIC1Q14526 733 aa10.27□□□□□ -0.77
ZNF560-202ENST00000585974 NUDT18Q6ZVK8 323 aa10.27□□□□□ -0.77
ZNF560-202ENST00000585974 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
ZNF560-202ENST00000585974 TSR3Q9UJK0 312 aaKnown RBP10.26□□□□□ -0.77
ZNF560-202ENST00000585974 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
ZNF560-202ENST00000585974 IFFO2Q5TF58 517 aa10.24□□□□□ -0.77
ZNF560-202ENST00000585974 RBM46Q8TBY0 533 aaKnown RBP10.24□□□□□ -0.77
ZNF560-202ENST00000585974 EYA1Q99502 592 aa10.24□□□□□ -0.77
ZNF560-202ENST00000585974 PLA2G2EQ9NZK7 142 aa10.24□□□□□ -0.77
ZNF560-202ENST00000585974 SMAPO00193 183 aa10.23□□□□□ -0.77
ZNF560-202ENST00000585974 BCAMP50895 628 aa10.23□□□□□ -0.77
ZNF560-202ENST00000585974 RBM26Q5T8P6 1007 aaKnown RBP10.22□□□□□ -0.77
ZNF560-202ENST00000585974 OATP04181 439 aa10.21□□□□□ -0.77
ZNF560-202ENST00000585974 PPP4CP60510 307 aa10.21□□□□□ -0.77
ZNF560-202ENST00000585974 SAMD7Q7Z3H4 446 aa10.21□□□□□ -0.77
ZNF560-202ENST00000585974 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.77
ZNF560-202ENST00000585974 C3orf80F5H4A9 247 aa10.2□□□□□ -0.78
ZNF560-202ENST00000585974 GNPATO15228 680 aa10.2□□□□□ -0.78
ZNF560-202ENST00000585974 ADGRG1Q9Y653 693 aa10.2□□□□□ -0.78
ZNF560-202ENST00000585974 SLF2Q8IX21 1173 aa10.19□□□□□ -0.78
ZNF560-202ENST00000585974 WBP1LQ9NX94 342 aa10.19□□□□□ -0.78
ZNF560-202ENST00000585974 DNAJB2P25686 324 aa10.18□□□□□ -0.78
ZNF560-202ENST00000585974 GPIHBP1Q8IV16 184 aa10.17□□□□□ -0.78
ZNF560-202ENST00000585974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.15□□□□□ -0.78
ZNF560-202ENST00000585974 GPR37O15354 613 aa10.15□□□□□ -0.78
ZNF560-202ENST00000585974 ITGBL1O95965 494 aaPredicted RBP10.15□□□□□ -0.78
ZNF560-202ENST00000585974 SWT1Q5T5J6 900 aaKnown RBP10.14□□□□□ -0.79
ZNF560-202ENST00000585974 PRR14Q9BWN1 585 aa10.13□□□□□ -0.79
ZNF560-202ENST00000585974 TMEM134Q9H6X4 195 aa10.13□□□□□ -0.79
ZNF560-202ENST00000585974 RCCD1A6NED2 376 aa10.12□□□□□ -0.79
ZNF560-202ENST00000585974 PXYLP1Q8TE99 480 aa10.12□□□□□ -0.79
ZNF560-202ENST00000585974 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.11□□□□□ -0.79
ZNF560-202ENST00000585974 KCNC4Q03721 635 aa10.1□□□□□ -0.79
ZNF560-202ENST00000585974 RSPH4AQ5TD94 716 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms