RNA–Protein interactions for RNA: ENST00000583958.1

MED13-206, Transcript of mediator complex subunit 13, humanhuman

TSL 1 (best)

Gene MED13, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED13-206ENST00000583958 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
MED13-206ENST00000583958 PCDHGA10Q9Y5H3 936 aa12.61□□□□□ -0.39
MED13-206ENST00000583958 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
MED13-206ENST00000583958 SCRIBQ14160 1630 aa12.6□□□□□ -0.39
MED13-206ENST00000583958 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
MED13-206ENST00000583958 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
MED13-206ENST00000583958 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
MED13-206ENST00000583958 PHF14O94880 888 aa12.59□□□□□ -0.39
MED13-206ENST00000583958 TYW1BQ6NUM6 668 aa12.59□□□□□ -0.39
MED13-206ENST00000583958 ZCCHC6Q5VYS8 1495 aaKnown RBP12.58□□□□□ -0.4
MED13-206ENST00000583958 PPP1R3GB7ZBB8 358 aa12.56□□□□□ -0.4
MED13-206ENST00000583958 EPAS1Q99814 870 aa12.54□□□□□ -0.4
MED13-206ENST00000583958 NBPF3Q9H094 633 aa12.54□□□□□ -0.4
MED13-206ENST00000583958 GOLGA8CPA6NN73 597 aa12.53□□□□□ -0.4
MED13-206ENST00000583958 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
MED13-206ENST00000583958 MRPL50Q8N5N7 158 aaKnown RBP12.53□□□□□ -0.4
MED13-206ENST00000583958 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.4
MED13-206ENST00000583958 WDR70Q9NW82 654 aa12.51□□□□□ -0.41
MED13-206ENST00000583958 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
MED13-206ENST00000583958 COL9A1P20849 921 aa12.49□□□□□ -0.41
MED13-206ENST00000583958 DDX12PQ92771 950 aa12.49□□□□□ -0.41
MED13-206ENST00000583958 PDIA6Q15084 440 aa12.48□□□□□ -0.41
MED13-206ENST00000583958 E2F4Q16254 413 aa12.48□□□□□ -0.41
MED13-206ENST00000583958 PTPN5P54829 565 aa12.47□□□□□ -0.41
MED13-206ENST00000583958 PROX2Q3B8N5 592 aa12.47□□□□□ -0.41
MED13-206ENST00000583958 WNT2BQ93097 391 aa12.47□□□□□ -0.41
MED13-206ENST00000583958 SPDYE16A6NNV3 312 aaPredicted RBP12.46□□□□□ -0.41
MED13-206ENST00000583958 RBM33Q96EV2 1170 aaKnown RBP12.46□□□□□ -0.41
MED13-206ENST00000583958 RABGEF1Q9UJ41 708 aa12.46□□□□□ -0.41
MED13-206ENST00000583958 C6orf132Q5T0Z8 1188 aa12.45□□□□□ -0.42
MED13-206ENST00000583958 THSD4Q6ZMP0 1018 aa12.45□□□□□ -0.42
MED13-206ENST00000583958 NBR1Q14596 966 aa12.44□□□□□ -0.42
MED13-206ENST00000583958 MAP3K7O43318 606 aa12.4□□□□□ -0.42
MED13-206ENST00000583958 EN1Q05925 392 aaPredicted RBP12.4□□□□□ -0.42
MED13-206ENST00000583958 ARIH1Q9Y4X5 557 aaPredicted RBP12.4□□□□□ -0.42
MED13-206ENST00000583958 ANKK1Q8NFD2 765 aa12.39□□□□□ -0.43
MED13-206ENST00000583958 ONECUT3O60422 494 aaPredicted RBP12.38□□□□□ -0.43
MED13-206ENST00000583958 LAPTM4BQ86VI4 370 aa12.38□□□□□ -0.43
MED13-206ENST00000583958 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
MED13-206ENST00000583958 TRIM6-TRIM34B2RNG4 842 aa12.37□□□□□ -0.43
MED13-206ENST00000583958 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
MED13-206ENST00000583958 GRXCR2A6NFK2 248 aa12.33□□□□□ -0.44
MED13-206ENST00000583958 SEPT9Q9UHD8 586 aaPredicted RBP12.32□□□□□ -0.44
MED13-206ENST00000583958 ZFRQ96KR1 1074 aaKnown RBP12.31□□□□□ -0.44
MED13-206ENST00000583958 SOWAHBA6NEL2 793 aa12.29□□□□□ -0.44
MED13-206ENST00000583958 BCAMP50895 628 aa12.29□□□□□ -0.44
MED13-206ENST00000583958 FAM98CQ17RN3 349 aaKnown RBP12.29□□□□□ -0.44
MED13-206ENST00000583958 PACS2Q86VP3 889 aa12.28□□□□□ -0.44
MED13-206ENST00000583958 CERKQ8TCT0 537 aa12.28□□□□□ -0.44
MED13-206ENST00000583958 TSHZ2Q9NRE2 1034 aa12.28□□□□□ -0.44
MED13-206ENST00000583958 TSKSQ9UJT2 592 aa12.26□□□□□ -0.45
MED13-206ENST00000583958 PRIM1P49642 420 aaKnown RBP12.25□□□□□ -0.45
MED13-206ENST00000583958 IFFO2Q5TF58 517 aa12.25□□□□□ -0.45
MED13-206ENST00000583958 CDCA7LQ96GN5 454 aa12.24□□□□□ -0.45
MED13-206ENST00000583958 OSBPP22059 807 aa12.23□□□□□ -0.45
MED13-206ENST00000583958 PRSS12P56730 875 aa12.23□□□□□ -0.45
MED13-206ENST00000583958 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
MED13-206ENST00000583958 LRCH3Q96II8 777 aa12.23□□□□□ -0.45
MED13-206ENST00000583958 CUX2O14529 1486 aa12.22□□□□□ -0.45
MED13-206ENST00000583958 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
MED13-206ENST00000583958 PLCB2Q00722 1185 aa12.21□□□□□ -0.45
MED13-206ENST00000583958 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
MED13-206ENST00000583958 CDHR5Q9HBB8 845 aa12.2□□□□□ -0.46
MED13-206ENST00000583958 WBP1LQ9NX94 342 aa12.2□□□□□ -0.46
MED13-206ENST00000583958 NBPF26B4DH59 902 aa12.19□□□□□ -0.46
MED13-206ENST00000583958 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
MED13-206ENST00000583958 HPS5Q9UPZ3 1129 aa12.18□□□□□ -0.46
MED13-206ENST00000583958 KCNV2Q8TDN2 545 aa12.17□□□□□ -0.46
MED13-206ENST00000583958 A0A0G2JS52 829 aa12.16□□□□□ -0.46
MED13-206ENST00000583958 SMAPO00193 183 aa12.16□□□□□ -0.46
MED13-206ENST00000583958 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
MED13-206ENST00000583958 RBM27Q9P2N5 1060 aaKnown RBP12.16□□□□□ -0.46
MED13-206ENST00000583958 FAM198AQ9UFP1 575 aa12.16□□□□□ -0.46
MED13-206ENST00000583958 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
MED13-206ENST00000583958 TATDN2Q93075 761 aa12.14□□□□□ -0.47
MED13-206ENST00000583958 RGS20O76081 388 aa12.12□□□□□ -0.47
MED13-206ENST00000583958 SAMD7Q7Z3H4 446 aa12.12□□□□□ -0.47
MED13-206ENST00000583958 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
MED13-206ENST00000583958 PPP4CP60510 307 aa12.11□□□□□ -0.47
MED13-206ENST00000583958 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
MED13-206ENST00000583958 MLLT3P42568 568 aaPredicted RBP12.1□□□□□ -0.47
MED13-206ENST00000583958 NUDT18Q6ZVK8 323 aa12.1□□□□□ -0.47
MED13-206ENST00000583958 NESP48681 1621 aa12.09□□□□□ -0.47
MED13-206ENST00000583958 C3orf80F5H4A9 247 aa12.09□□□□□ -0.47
MED13-206ENST00000583958 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
MED13-206ENST00000583958 KCNC4Q03721 635 aa12.08□□□□□ -0.48
MED13-206ENST00000583958 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
MED13-206ENST00000583958 HDGFP51858 240 aaKnown RBP12.07□□□□□ -0.48
MED13-206ENST00000583958 NPDC1Q9NQX5 325 aaPredicted RBP12.07□□□□□ -0.48
MED13-206ENST00000583958 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
MED13-206ENST00000583958 THOC2Q8NI27 1593 aaKnown RBP12.05□□□□□ -0.48
MED13-206ENST00000583958 RNF40O75150 1001 aa12.05□□□□□ -0.48
MED13-206ENST00000583958 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
MED13-206ENST00000583958 ATAD2BQ9ULI0 1458 aa12.03□□□□□ -0.48
MED13-206ENST00000583958 NECTIN2Q92692 538 aa12□□□□□ -0.49
MED13-206ENST00000583958 SLC4A3P48751 1232 aa11.99□□□□□ -0.49
MED13-206ENST00000583958 SMARCA4P51532 1647 aa11.98□□□□□ -0.49
MED13-206ENST00000583958 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
MED13-206ENST00000583958 PTGDRQ13258 359 aa11.98□□□□□ -0.49
MED13-206ENST00000583958 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms