RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 ARIH1Q9Y4X5 557 aaPredicted RBP9.52□□□□□ -0.89
PTPRM-215ENST00000583289 HCSTQ9UBK5 93 aa9.51□□□□□ -0.89
PTPRM-215ENST00000583289 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
PTPRM-215ENST00000583289 BHMG1C9JSJ3 638 aaPredicted RBP9.48□□□□□ -0.89
PTPRM-215ENST00000583289 DDX12PQ92771 950 aa9.48□□□□□ -0.89
PTPRM-215ENST00000583289 MRPL50Q8N5N7 158 aaKnown RBP9.47□□□□□ -0.89
PTPRM-215ENST00000583289 KCTD12Q96CX2 325 aaKnown RBP9.47□□□□□ -0.89
PTPRM-215ENST00000583289 C6orf132Q5T0Z8 1188 aa9.46□□□□□ -0.9
PTPRM-215ENST00000583289 GOLGA8CPA6NN73 597 aa9.45□□□□□ -0.9
PTPRM-215ENST00000583289 COL9A1P20849 921 aa9.45□□□□□ -0.9
PTPRM-215ENST00000583289 NBR1Q14596 966 aa9.45□□□□□ -0.9
PTPRM-215ENST00000583289 RABGEF1Q9UJ41 708 aa9.45□□□□□ -0.9
PTPRM-215ENST00000583289 EN1Q05925 392 aaPredicted RBP9.44□□□□□ -0.9
PTPRM-215ENST00000583289 RBM33Q96EV2 1170 aaKnown RBP9.44□□□□□ -0.9
PTPRM-215ENST00000583289 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
PTPRM-215ENST00000583289 ONECUT3O60422 494 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-215ENST00000583289 PROX2Q3B8N5 592 aa9.42□□□□□ -0.9
PTPRM-215ENST00000583289 MAP3K7O43318 606 aa9.41□□□□□ -0.9
PTPRM-215ENST00000583289 WNT2BQ93097 391 aa9.41□□□□□ -0.9
PTPRM-215ENST00000583289 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
PTPRM-215ENST00000583289 LAPTM4BQ86VI4 370 aa9.39□□□□□ -0.91
PTPRM-215ENST00000583289 GRXCR2A6NFK2 248 aa9.38□□□□□ -0.91
PTPRM-215ENST00000583289 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
PTPRM-215ENST00000583289 ARHGEF1Q92888 912 aaKnown RBP9.38□□□□□ -0.91
PTPRM-215ENST00000583289 PLA2G2EQ9NZK7 142 aa9.38□□□□□ -0.91
PTPRM-215ENST00000583289 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
PTPRM-215ENST00000583289 CERKQ8TCT0 537 aa9.37□□□□□ -0.91
PTPRM-215ENST00000583289 KIAA1468Q9P260 1216 aa9.37□□□□□ -0.91
PTPRM-215ENST00000583289 PTPN5P54829 565 aa9.36□□□□□ -0.91
PTPRM-215ENST00000583289 ANKK1Q8NFD2 765 aa9.36□□□□□ -0.91
PTPRM-215ENST00000583289 PLCB2Q00722 1185 aa9.35□□□□□ -0.91
PTPRM-215ENST00000583289 P3H3Q8IVL6 736 aa9.34□□□□□ -0.91
PTPRM-215ENST00000583289 KCNV2Q8TDN2 545 aa9.34□□□□□ -0.91
PTPRM-215ENST00000583289 OSBPP22059 807 aa9.33□□□□□ -0.92
PTPRM-215ENST00000583289 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
PTPRM-215ENST00000583289 FAM98CQ17RN3 349 aaKnown RBP9.32□□□□□ -0.92
PTPRM-215ENST00000583289 ZFRQ96KR1 1074 aaKnown RBP9.32□□□□□ -0.92
PTPRM-215ENST00000583289 PRIM1P49642 420 aaKnown RBP9.31□□□□□ -0.92
PTPRM-215ENST00000583289 PRSS12P56730 875 aa9.3□□□□□ -0.92
PTPRM-215ENST00000583289 CDCA7LQ96GN5 454 aa9.3□□□□□ -0.92
PTPRM-215ENST00000583289 SEPT9Q9UHD8 586 aaPredicted RBP9.3□□□□□ -0.92
PTPRM-215ENST00000583289 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
PTPRM-215ENST00000583289 NISCHQ9Y2I1 1504 aa9.3□□□□□ -0.92
PTPRM-215ENST00000583289 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
PTPRM-215ENST00000583289 RBM27Q9P2N5 1060 aaKnown RBP9.29□□□□□ -0.92
PTPRM-215ENST00000583289 NYAP1Q6ZVC0 841 aa9.28□□□□□ -0.92
PTPRM-215ENST00000583289 NBPF26B4DH59 902 aa9.27□□□□□ -0.93
PTPRM-215ENST00000583289 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
PTPRM-215ENST00000583289 BCAMP50895 628 aa9.26□□□□□ -0.93
PTPRM-215ENST00000583289 IFFO2Q5TF58 517 aa9.25□□□□□ -0.93
PTPRM-215ENST00000583289 LRCH3Q96II8 777 aa9.25□□□□□ -0.93
PTPRM-215ENST00000583289 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.24□□□□□ -0.93
PTPRM-215ENST00000583289 MLLT3P42568 568 aaPredicted RBP9.23□□□□□ -0.93
PTPRM-215ENST00000583289 TATDN2Q93075 761 aa9.22□□□□□ -0.93
PTPRM-215ENST00000583289 FAM198AQ9UFP1 575 aa9.22□□□□□ -0.93
PTPRM-215ENST00000583289 TSR3Q9UJK0 312 aaKnown RBP9.22□□□□□ -0.93
PTPRM-215ENST00000583289 NPDC1Q9NQX5 325 aaPredicted RBP9.21□□□□□ -0.94
PTPRM-215ENST00000583289 PNMA3Q9UL41 463 aa9.21□□□□□ -0.94
PTPRM-215ENST00000583289 TTC13Q8NBP0 860 aa9.2□□□□□ -0.94
PTPRM-215ENST00000583289 WBP1LQ9NX94 342 aa9.2□□□□□ -0.94
PTPRM-215ENST00000583289 HPS5Q9UPZ3 1129 aa9.2□□□□□ -0.94
PTPRM-215ENST00000583289 SMAPO00193 183 aa9.19□□□□□ -0.94
PTPRM-215ENST00000583289 ITGBL1O95965 494 aaPredicted RBP9.19□□□□□ -0.94
PTPRM-215ENST00000583289 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
PTPRM-215ENST00000583289 PADI6Q6TGC4 694 aa9.19□□□□□ -0.94
PTPRM-215ENST00000583289 HDGFP51858 240 aaKnown RBP9.18□□□□□ -0.94
PTPRM-215ENST00000583289 NUDT18Q6ZVK8 323 aa9.18□□□□□ -0.94
PTPRM-215ENST00000583289 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
PTPRM-215ENST00000583289 C3orf80F5H4A9 247 aa9.16□□□□□ -0.94
PTPRM-215ENST00000583289 PPP4CP60510 307 aa9.16□□□□□ -0.94
PTPRM-215ENST00000583289 PTGDRQ13258 359 aa9.16□□□□□ -0.94
PTPRM-215ENST00000583289 SEMA3EO15041 775 aa9.15□□□□□ -0.94
PTPRM-215ENST00000583289 A0A0G2JS52 829 aa9.14□□□□□ -0.95
PTPRM-215ENST00000583289 NECTIN2Q92692 538 aa9.14□□□□□ -0.95
PTPRM-215ENST00000583289 NUTM2FA1L443 756 aa9.13□□□□□ -0.95
PTPRM-215ENST00000583289 RGS20O76081 388 aa9.13□□□□□ -0.95
PTPRM-215ENST00000583289 SMYD5Q6GMV2 418 aa9.13□□□□□ -0.95
PTPRM-215ENST00000583289 SLC4A3P48751 1232 aa9.12□□□□□ -0.95
PTPRM-215ENST00000583289 RNF40O75150 1001 aa9.11□□□□□ -0.95
PTPRM-215ENST00000583289 FCHSD2O94868 740 aa9.11□□□□□ -0.95
PTPRM-215ENST00000583289 KCNC4Q03721 635 aa9.11□□□□□ -0.95
PTPRM-215ENST00000583289 TESPA1A2RU30 521 aaPredicted RBP9.1□□□□□ -0.95
PTPRM-215ENST00000583289 SLF2Q8IX21 1173 aa9.1□□□□□ -0.95
PTPRM-215ENST00000583289 EYA1Q99502 592 aa9.1□□□□□ -0.95
PTPRM-215ENST00000583289 SWT1Q5T5J6 900 aaKnown RBP9.08□□□□□ -0.96
PTPRM-215ENST00000583289 RBM46Q8TBY0 533 aaKnown RBP9.08□□□□□ -0.96
PTPRM-215ENST00000583289 ADGRG1Q9Y653 693 aa9.07□□□□□ -0.96
PTPRM-215ENST00000583289 DNAJB2P25686 324 aa9.06□□□□□ -0.96
PTPRM-215ENST00000583289 KDM2AQ9Y2K7 1162 aa9.06□□□□□ -0.96
PTPRM-215ENST00000583289 HIC1Q14526 733 aa9.05□□□□□ -0.96
PTPRM-215ENST00000583289 VSIG10Q8N0Z9 540 aa9.05□□□□□ -0.96
PTPRM-215ENST00000583289 RBM26Q5T8P6 1007 aaKnown RBP9.04□□□□□ -0.96
PTPRM-215ENST00000583289 PRR14Q9BWN1 585 aa9.04□□□□□ -0.96
PTPRM-215ENST00000583289 TJAP1Q5JTD0 557 aa9.03□□□□□ -0.96
PTPRM-215ENST00000583289 IL21Q9HBE4 155 aa9.03□□□□□ -0.96
PTPRM-215ENST00000583289 APLP1P51693 650 aa9.02□□□□□ -0.97
PTPRM-215ENST00000583289 MTRQ99707 1265 aa9.02□□□□□ -0.97
PTPRM-215ENST00000583289 TMEM134Q9H6X4 195 aa9.02□□□□□ -0.97
PTPRM-215ENST00000583289 OATP04181 439 aa9.01□□□□□ -0.97
PTPRM-215ENST00000583289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms