RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.53
RNF43-205ENST00000581868 NOP58Q9Y2X3 529 aaKnown RBP18.38■□□□□ 0.53
RNF43-205ENST00000581868 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
RNF43-205ENST00000581868 LRPPRCP42704 1394 aaKnown RBP18.37■□□□□ 0.53
RNF43-205ENST00000581868 NUP160Q12769 1436 aa18.37■□□□□ 0.53
RNF43-205ENST00000581868 PAK3O75914 559 aaPredicted RBP18.36■□□□□ 0.53
RNF43-205ENST00000581868 ABCA8O94911 1581 aa18.35■□□□□ 0.53
RNF43-205ENST00000581868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.536e-9■■□□□ 14.4
RNF43-205ENST00000581868 NBPF1Q3BBV0 1214 aa18.34■□□□□ 0.53
RNF43-205ENST00000581868 KDM5DQ9BY66 1539 aa18.33■□□□□ 0.53
RNF43-205ENST00000581868 NBR1Q14596 966 aa18.33■□□□□ 0.52
RNF43-205ENST00000581868 PTPRGP23470 1445 aa18.32■□□□□ 0.52
RNF43-205ENST00000581868 KTN1Q86UP2 1357 aaKnown RBP18.32■□□□□ 0.52
RNF43-205ENST00000581868 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
RNF43-205ENST00000581868 ANP32AP39687 249 aaKnown RBP18.32■□□□□ 0.52
RNF43-205ENST00000581868 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
RNF43-205ENST00000581868 EXOC6Q8TAG9 804 aa18.32■□□□□ 0.52
RNF43-205ENST00000581868 RCAN3Q9UKA8 241 aa18.31■□□□□ 0.52
RNF43-205ENST00000581868 CCDC144AA2RUR9 1427 aa18.3■□□□□ 0.52
RNF43-205ENST00000581868 FAM135AQ9P2D6 1515 aa18.29■□□□□ 0.52
RNF43-205ENST00000581868 CC2D1BQ5T0F9 858 aaKnown RBP18.29■□□□□ 0.52
RNF43-205ENST00000581868 CCDC141Q6ZP82 1450 aa18.28■□□□□ 0.52
RNF43-205ENST00000581868 PRAG1Q86YV5 1406 aa18.27■□□□□ 0.52
RNF43-205ENST00000581868 IPO9Q96P70 1041 aaKnown RBP18.27■□□□□ 0.52
RNF43-205ENST00000581868 CDCA7LQ96GN5 454 aa18.26■□□□□ 0.51
RNF43-205ENST00000581868 ARHGEF5Q12774 1597 aa18.26■□□□□ 0.51
RNF43-205ENST00000581868 PARD3Q8TEW0 1356 aa18.26■□□□□ 0.51
RNF43-205ENST00000581868 PER1O15534 1290 aaPredicted RBP18.26■□□□□ 0.51
RNF43-205ENST00000581868 DEKP35659 375 aaKnown RBP18.26■□□□□ 0.51
RNF43-205ENST00000581868 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
RNF43-205ENST00000581868 SAMD9LQ8IVG5 1584 aa18.24■□□□□ 0.51
RNF43-205ENST00000581868 E9PCH4 1651 aa18.24■□□□□ 0.51
RNF43-205ENST00000581868 RSPH4AQ5TD94 716 aa18.24■□□□□ 0.51
RNF43-205ENST00000581868 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
RNF43-205ENST00000581868 NPM2Q86SE8 214 aaKnown RBP18.23■□□□□ 0.51
RNF43-205ENST00000581868 PANK3Q9H999 370 aa18.23■□□□□ 0.51
RNF43-205ENST00000581868 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
RNF43-205ENST00000581868 PDE3BQ13370 1112 aa18.22■□□□□ 0.51
RNF43-205ENST00000581868 TRPM1Q7Z4N2 1603 aa18.22■□□□□ 0.51
RNF43-205ENST00000581868 PLA2R1Q13018 1463 aa18.21■□□□□ 0.51
RNF43-205ENST00000581868 PLIN1O60240 522 aa18.2■□□□□ 0.5
RNF43-205ENST00000581868 TESK2Q96S53 571 aa18.2■□□□□ 0.5
RNF43-205ENST00000581868 A2MP01023 1474 aa18.2■□□□□ 0.5
RNF43-205ENST00000581868 CDC42BPBQ9Y5S2 1711 aa18.2■□□□□ 0.5
RNF43-205ENST00000581868 SYCP2Q9BX26 1530 aa18.19■□□□□ 0.5
RNF43-205ENST00000581868 GPRASP1Q5JY77 1395 aa18.17■□□□□ 0.5
RNF43-205ENST00000581868 ARHGAP5Q13017 1502 aa18.17■□□□□ 0.5
RNF43-205ENST00000581868 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
RNF43-205ENST00000581868 TMF1P82094 1093 aa18.17■□□□□ 0.5
RNF43-205ENST00000581868 PREX2Q70Z35 1606 aa18.16■□□□□ 0.5
RNF43-205ENST00000581868 PLEKHH2Q8IVE3 1493 aa18.16■□□□□ 0.5
RNF43-205ENST00000581868 COL17A1Q9UMD9 1497 aaPredicted RBP18.16■□□□□ 0.5
RNF43-205ENST00000581868 ERBINQ96RT1 1412 aa18.16■□□□□ 0.5
RNF43-205ENST00000581868 PDE4AP27815 886 aa18.15■□□□□ 0.5
RNF43-205ENST00000581868 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
RNF43-205ENST00000581868 RTL5Q5HYW3 569 aaPredicted RBP18.12■□□□□ 0.49
RNF43-205ENST00000581868 CRBNQ96SW2 442 aa18.12■□□□□ 0.49
RNF43-205ENST00000581868 PRDM15P57071 1507 aaPredicted RBP18.12■□□□□ 0.49
RNF43-205ENST00000581868 SKAP1Q86WV1 359 aa18.11■□□□□ 0.49
RNF43-205ENST00000581868 TTC37Q6PGP7 1564 aa18.11■□□□□ 0.49
RNF43-205ENST00000581868 ADAMTS8Q9UP79 889 aa18.11■□□□□ 0.49
RNF43-205ENST00000581868 UNC13BO14795 1591 aa18.1■□□□□ 0.49
RNF43-205ENST00000581868 BACH2Q9BYV9 841 aa18.09■□□□□ 0.49
RNF43-205ENST00000581868 BLMP54132 1417 aaPredicted RBP18.09■□□□□ 0.49
RNF43-205ENST00000581868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.09■□□□□ 0.49
RNF43-205ENST00000581868 KNSTRNQ9Y448 316 aa18.07■□□□□ 0.48
RNF43-205ENST00000581868 MS4A1P11836 297 aa18.06■□□□□ 0.48
RNF43-205ENST00000581868 C20orf194Q5TEA3 1177 aa18.06■□□□□ 0.48
RNF43-205ENST00000581868 MAST1Q9Y2H9 1570 aa18.06■□□□□ 0.48
RNF43-205ENST00000581868 MYO5CQ9NQX4 1742 aa18.06■□□□□ 0.48
RNF43-205ENST00000581868 IQGAP3Q86VI3 1631 aa18.06■□□□□ 0.48
RNF43-205ENST00000581868 WDR43Q15061 677 aaKnown RBP eCLIP18.05■□□□□ 0.48
RNF43-205ENST00000581868 LAMC1P11047 1609 aa18.05■□□□□ 0.48
RNF43-205ENST00000581868 LAS1LQ9Y4W2 734 aaKnown RBP18.04■□□□□ 0.48
RNF43-205ENST00000581868 EIF2AK4Q9P2K8 1649 aaKnown RBP18.04■□□□□ 0.48
RNF43-205ENST00000581868 PPP2R1AP30153 589 aa18.03■□□□□ 0.48
RNF43-205ENST00000581868 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
RNF43-205ENST00000581868 INSRP06213 1382 aa18.02■□□□□ 0.48
RNF43-205ENST00000581868 PLXNC1O60486 1568 aa18.02■□□□□ 0.47
RNF43-205ENST00000581868 MAGI2Q86UL8 1455 aa18.02■□□□□ 0.47
RNF43-205ENST00000581868 ZMYM4Q5VZL5 1548 aa18.01■□□□□ 0.47
RNF43-205ENST00000581868 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
RNF43-205ENST00000581868 ATP10AO60312 1499 aa18■□□□□ 0.47
RNF43-205ENST00000581868 PLEKHH1Q9ULM0 1364 aa17.99■□□□□ 0.47
RNF43-205ENST00000581868 WDR7Q9Y4E6 1490 aa17.99■□□□□ 0.47
RNF43-205ENST00000581868 AMER1Q5JTC6 1135 aaPredicted RBP17.99■□□□□ 0.47
RNF43-205ENST00000581868 DUSP27Q5VZP5 1158 aa17.98■□□□□ 0.47
RNF43-205ENST00000581868 NEFMP07197 916 aa17.97■□□□□ 0.47
RNF43-205ENST00000581868 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
RNF43-205ENST00000581868 GOLGA2Q08379 1002 aa17.96■□□□□ 0.47
RNF43-205ENST00000581868 CCDC146Q8IYE0 955 aa17.96■□□□□ 0.47
RNF43-205ENST00000581868 TRAPPC8Q9Y2L5 1435 aa17.96■□□□□ 0.47
RNF43-205ENST00000581868 CDCA8Q53HL2 280 aa17.96■□□□□ 0.47
RNF43-205ENST00000581868 AFAP1Q8N556 730 aa17.96■□□□□ 0.47
RNF43-205ENST00000581868 PLCH2O75038 1416 aa17.95■□□□□ 0.46
RNF43-205ENST00000581868 ABCC2Q92887 1545 aa17.95■□□□□ 0.46
RNF43-205ENST00000581868 SPAG9O60271 1321 aaKnown RBP17.94■□□□□ 0.46
RNF43-205ENST00000581868 CHD1O14646 1710 aa17.94■□□□□ 0.46
RNF43-205ENST00000581868 RNF17Q9BXT8 1623 aaKnown RBP17.94■□□□□ 0.46
RNF43-205ENST00000581868 KDM2BQ8NHM5 1336 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1295.2 ms