RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 BRPF3Q9ULD4 1205 aa17.23■□□□□ 0.35
TRAPPC8-207ENST00000580104 CARMIL2Q6F5E8 1435 aa17.22■□□□□ 0.35
TRAPPC8-207ENST00000580104 GGT6Q6P531 493 aa17.21■□□□□ 0.35
TRAPPC8-207ENST00000580104 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
TRAPPC8-207ENST00000580104 MSNP26038 577 aaKnown RBP17.21■□□□□ 0.35
TRAPPC8-207ENST00000580104 ARID3AQ99856 593 aa17.21■□□□□ 0.35
TRAPPC8-207ENST00000580104 HFM1A2PYH4 1435 aa17.21■□□□□ 0.35
TRAPPC8-207ENST00000580104 CUX1P39880 1505 aa17.2■□□□□ 0.34
TRAPPC8-207ENST00000580104 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
TRAPPC8-207ENST00000580104 SKAP1Q86WV1 359 aa17.19■□□□□ 0.34
TRAPPC8-207ENST00000580104 KANK1Q14678 1352 aa17.19■□□□□ 0.34
TRAPPC8-207ENST00000580104 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
TRAPPC8-207ENST00000580104 GBP4Q96PP9 640 aa17.19■□□□□ 0.34
TRAPPC8-207ENST00000580104 NUTM2DQ5VT03 806 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC8-207ENST00000580104 SOX12O15370 315 aa17.18■□□□□ 0.34
TRAPPC8-207ENST00000580104 C14orf37Q86TY3 774 aa17.18■□□□□ 0.34
TRAPPC8-207ENST00000580104 FYCO1Q9BQS8 1478 aa17.18■□□□□ 0.34
TRAPPC8-207ENST00000580104 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
TRAPPC8-207ENST00000580104 KIF3BO15066 747 aa17.17■□□□□ 0.34
TRAPPC8-207ENST00000580104 BACH2Q9BYV9 841 aa17.17■□□□□ 0.34
TRAPPC8-207ENST00000580104 CHMP4BQ9H444 224 aaKnown RBP17.16■□□□□ 0.34
TRAPPC8-207ENST00000580104 TRAK1Q9UPV9 953 aa17.16■□□□□ 0.34
TRAPPC8-207ENST00000580104 E9PSI1 815 aa17.16■□□□□ 0.34
TRAPPC8-207ENST00000580104 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC8-207ENST00000580104 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
TRAPPC8-207ENST00000580104 FRAT2O75474 233 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC8-207ENST00000580104 NAIPQ13075 1403 aa17.15■□□□□ 0.34
TRAPPC8-207ENST00000580104 SMG6Q86US8 1419 aaKnown RBP17.14■□□□□ 0.33
TRAPPC8-207ENST00000580104 NBPF1Q3BBV0 1214 aa17.14■□□□□ 0.33
TRAPPC8-207ENST00000580104 EFCAB2Q5VUJ9 269 aa17.14■□□□□ 0.33
TRAPPC8-207ENST00000580104 PANK1Q8TE04 598 aa17.13■□□□□ 0.33
TRAPPC8-207ENST00000580104 CGNL1Q0VF96 1302 aa17.13■□□□□ 0.33
TRAPPC8-207ENST00000580104 NCAPD3P42695 1498 aa17.13■□□□□ 0.33
TRAPPC8-207ENST00000580104 EIF3AQ14152 1382 aaKnown RBP17.11■□□□□ 0.33
TRAPPC8-207ENST00000580104 ANKRD50Q9ULJ7 1429 aa17.1■□□□□ 0.33
TRAPPC8-207ENST00000580104 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC8-207ENST00000580104 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
TRAPPC8-207ENST00000580104 MAPKBP1O60336 1514 aa17.08■□□□□ 0.32
TRAPPC8-207ENST00000580104 RSPH4AQ5TD94 716 aa17.08■□□□□ 0.32
TRAPPC8-207ENST00000580104 SPAG9O60271 1321 aaKnown RBP17.06■□□□□ 0.32
TRAPPC8-207ENST00000580104 FOXD4L5Q5VV16 416 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC8-207ENST00000580104 FOXD4L4Q8WXT5 416 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC8-207ENST00000580104 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
TRAPPC8-207ENST00000580104 NOL8Q76FK4 1167 aaKnown RBP17.05■□□□□ 0.32
TRAPPC8-207ENST00000580104 BCAR3O75815 825 aa17.05■□□□□ 0.32
TRAPPC8-207ENST00000580104 ANKRD45Q5TZF3 282 aa17.04■□□□□ 0.32
TRAPPC8-207ENST00000580104 HSP90AA2PQ14568 343 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC8-207ENST00000580104 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
TRAPPC8-207ENST00000580104 OS9Q13438 667 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC8-207ENST00000580104 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC8-207ENST00000580104 TAOK2Q9UL54 1235 aa17.03■□□□□ 0.32
TRAPPC8-207ENST00000580104 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAPPC8-207ENST00000580104 PCF11O94913 1555 aaKnown RBP17.03■□□□□ 0.32
TRAPPC8-207ENST00000580104 PPP2R1AP30153 589 aa17.02■□□□□ 0.32
TRAPPC8-207ENST00000580104 MIA2Q96PC5 1412 aa17.02■□□□□ 0.32
TRAPPC8-207ENST00000580104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.02■□□□□ 0.31
TRAPPC8-207ENST00000580104 DDX11L8A8MPP1 907 aa17.02■□□□□ 0.31
TRAPPC8-207ENST00000580104 KCNJ4P48050 445 aa17.02■□□□□ 0.31
TRAPPC8-207ENST00000580104 C20orf194Q5TEA3 1177 aa17.01■□□□□ 0.31
TRAPPC8-207ENST00000580104 DDX49Q9Y6V7 483 aaKnown RBP17.01■□□□□ 0.31
TRAPPC8-207ENST00000580104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.31
TRAPPC8-207ENST00000580104 VSIG10Q8N0Z9 540 aa17■□□□□ 0.31
TRAPPC8-207ENST00000580104 MCCP23508 829 aa16.99■□□□□ 0.31
TRAPPC8-207ENST00000580104 DZIP1LQ8IYY4 767 aaKnown RBP16.99■□□□□ 0.31
TRAPPC8-207ENST00000580104 MLECQ14165 292 aa16.98■□□□□ 0.31
TRAPPC8-207ENST00000580104 CHMP5Q9NZZ3 219 aa16.98■□□□□ 0.31
TRAPPC8-207ENST00000580104 KIAA1107Q9UPP5 1409 aa16.98■□□□□ 0.31
TRAPPC8-207ENST00000580104 PTMSP20962 102 aa16.97■□□□□ 0.31
TRAPPC8-207ENST00000580104 FOXD4L6Q3SYB3 417 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC8-207ENST00000580104 FOXD4L3Q6VB84 417 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC8-207ENST00000580104 LNPKQ9C0E8 428 aa16.97■□□□□ 0.31
TRAPPC8-207ENST00000580104 EFCAB5A4FU69 1503 aa16.97■□□□□ 0.31
TRAPPC8-207ENST00000580104 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
TRAPPC8-207ENST00000580104 C22orf23Q9BZE7 217 aa16.97■□□□□ 0.31
TRAPPC8-207ENST00000580104 SLC4A10Q6U841 1118 aa16.97■□□□□ 0.31
TRAPPC8-207ENST00000580104 ZRSR1Q15695 479 aaKnown RBP16.96■□□□□ 0.31
TRAPPC8-207ENST00000580104 GOLGA6L4A6NEF3 574 aa16.95■□□□□ 0.3
TRAPPC8-207ENST00000580104 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
TRAPPC8-207ENST00000580104 EHBP1L1Q8N3D4 1523 aa16.95■□□□□ 0.3
TRAPPC8-207ENST00000580104 NCOA1Q15788 1441 aa16.95■□□□□ 0.3
TRAPPC8-207ENST00000580104 TERF2IPQ9NYB0 399 aa16.95■□□□□ 0.3
TRAPPC8-207ENST00000580104 NESP48681 1621 aa16.95■□□□□ 0.3
TRAPPC8-207ENST00000580104 RUNDC1Q96C34 613 aa16.94■□□□□ 0.3
TRAPPC8-207ENST00000580104 TRIM6-TRIM34B2RNG4 842 aa16.94■□□□□ 0.3
TRAPPC8-207ENST00000580104 FGD1P98174 961 aa16.94■□□□□ 0.3
TRAPPC8-207ENST00000580104 RTF1Q92541 710 aaKnown RBP16.93■□□□□ 0.3
TRAPPC8-207ENST00000580104 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
TRAPPC8-207ENST00000580104 NAP1L2Q9ULW6 460 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC8-207ENST00000580104 DAPK1P53355 1430 aa16.93■□□□□ 0.3
TRAPPC8-207ENST00000580104 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC8-207ENST00000580104 TCP11L2Q8N4U5 519 aa16.93■□□□□ 0.3
TRAPPC8-207ENST00000580104 PDZRN3Q9UPQ7 1066 aa16.93■□□□□ 0.3
TRAPPC8-207ENST00000580104 DDX19BQ9UMR2 479 aa16.93■□□□□ 0.3
TRAPPC8-207ENST00000580104 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC8-207ENST00000580104 DRC7Q8IY82 874 aa16.92■□□□□ 0.3
TRAPPC8-207ENST00000580104 PTPRGP23470 1445 aa16.92■□□□□ 0.3
TRAPPC8-207ENST00000580104 CHAF1AQ13111 956 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC8-207ENST00000580104 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
TRAPPC8-207ENST00000580104 KIAA2012Q0VF49 1180 aa16.91■□□□□ 0.3
TRAPPC8-207ENST00000580104 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms