RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 EPAS1Q99814 870 aa8.71□□□□□ -1.02
CDH8-206ENST00000580044 AMER1Q5JTC6 1135 aaPredicted RBP8.69□□□□□ -1.02
CDH8-206ENST00000580044 ANKK1Q8NFD2 765 aa8.69□□□□□ -1.02
CDH8-206ENST00000580044 EMILIN3Q9NT22 766 aa8.69□□□□□ -1.02
CDH8-206ENST00000580044 WDR70Q9NW82 654 aa8.69□□□□□ -1.02
CDH8-206ENST00000580044 RABGEF1Q9UJ41 708 aa8.69□□□□□ -1.02
CDH8-206ENST00000580044 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
CDH8-206ENST00000580044 PCDHGA10Q9Y5H3 936 aa8.68□□□□□ -1.02
CDH8-206ENST00000580044 MYO15BQ96JP2 1530 aa8.68□□□□□ -1.02
CDH8-206ENST00000580044 BHMG1C9JSJ3 638 aaPredicted RBP8.67□□□□□ -1.02
CDH8-206ENST00000580044 ABCC9O60706 1549 aa8.66□□□□□ -1.02
CDH8-206ENST00000580044 DPYSL4O14531 572 aa8.65□□□□□ -1.02
CDH8-206ENST00000580044 CADPS2Q86UW7 1296 aa8.65□□□□□ -1.02
CDH8-206ENST00000580044 LAPTM4BQ86VI4 370 aa8.65□□□□□ -1.02
CDH8-206ENST00000580044 ONECUT3O60422 494 aaPredicted RBP8.64□□□□□ -1.03
CDH8-206ENST00000580044 HRCP23327 699 aa8.64□□□□□ -1.03
CDH8-206ENST00000580044 CAMK2BQ13554 666 aa8.64□□□□□ -1.03
CDH8-206ENST00000580044 SPDYE16A6NNV3 312 aaPredicted RBP8.62□□□□□ -1.03
CDH8-206ENST00000580044 RGS20O76081 388 aa8.62□□□□□ -1.03
CDH8-206ENST00000580044 C6orf132Q5T0Z8 1188 aa8.62□□□□□ -1.03
CDH8-206ENST00000580044 NYAP1Q6ZVC0 841 aa8.62□□□□□ -1.03
CDH8-206ENST00000580044 RBM33Q96EV2 1170 aaKnown RBP8.61□□□□□ -1.03
CDH8-206ENST00000580044 KIAA1468Q9P260 1216 aa8.61□□□□□ -1.03
CDH8-206ENST00000580044 PROX2Q3B8N5 592 aa8.6□□□□□ -1.03
CDH8-206ENST00000580044 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
CDH8-206ENST00000580044 PACS2Q86VP3 889 aa8.6□□□□□ -1.03
CDH8-206ENST00000580044 DDX12PQ92771 950 aa8.6□□□□□ -1.03
CDH8-206ENST00000580044 CFAP44Q96MT7 982 aa8.6□□□□□ -1.03
CDH8-206ENST00000580044 MAP3K7O43318 606 aa8.59□□□□□ -1.03
CDH8-206ENST00000580044 COL9A1P20849 921 aa8.58□□□□□ -1.04
CDH8-206ENST00000580044 NBR1Q14596 966 aa8.58□□□□□ -1.04
CDH8-206ENST00000580044 E2F4Q16254 413 aa8.58□□□□□ -1.04
CDH8-206ENST00000580044 TRIM6-TRIM34B2RNG4 842 aa8.57□□□□□ -1.04
CDH8-206ENST00000580044 HDGFP51858 240 aaKnown RBP8.57□□□□□ -1.04
CDH8-206ENST00000580044 PAXIP1Q6ZW49 1069 aaPredicted RBP8.57□□□□□ -1.04
CDH8-206ENST00000580044 ZFRQ96KR1 1074 aaKnown RBP8.57□□□□□ -1.04
CDH8-206ENST00000580044 SOWAHBA6NEL2 793 aa8.56□□□□□ -1.04
CDH8-206ENST00000580044 FAM98CQ17RN3 349 aaKnown RBP8.56□□□□□ -1.04
CDH8-206ENST00000580044 CERKQ8TCT0 537 aa8.56□□□□□ -1.04
CDH8-206ENST00000580044 LRCH3Q96II8 777 aa8.55□□□□□ -1.04
CDH8-206ENST00000580044 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.55□□□□□ -1.04
CDH8-206ENST00000580044 PDIA6Q15084 440 aa8.54□□□□□ -1.04
CDH8-206ENST00000580044 BCAMP50895 628 aa8.53□□□□□ -1.04
CDH8-206ENST00000580044 EN1Q05925 392 aaPredicted RBP8.53□□□□□ -1.04
CDH8-206ENST00000580044 SEPT9Q9UHD8 586 aaPredicted RBP8.53□□□□□ -1.04
CDH8-206ENST00000580044 A0A0G2JS52 829 aa8.52□□□□□ -1.05
CDH8-206ENST00000580044 KCNC4Q03721 635 aa8.52□□□□□ -1.05
CDH8-206ENST00000580044 TSR3Q9UJK0 312 aaKnown RBP8.52□□□□□ -1.05
CDH8-206ENST00000580044 GRXCR2A6NFK2 248 aa8.51□□□□□ -1.05
CDH8-206ENST00000580044 SLC4A3P48751 1232 aa8.51□□□□□ -1.05
CDH8-206ENST00000580044 PPP4CP60510 307 aa8.51□□□□□ -1.05
CDH8-206ENST00000580044 IRX2Q9BZI1 471 aaPredicted RBP8.51□□□□□ -1.05
CDH8-206ENST00000580044 NECTIN2Q92692 538 aa8.49□□□□□ -1.05
CDH8-206ENST00000580044 RTN4Q9NQC3 1192 aaKnown RBP8.49□□□□□ -1.05
CDH8-206ENST00000580044 HPS5Q9UPZ3 1129 aa8.49□□□□□ -1.05
CDH8-206ENST00000580044 RB1CC1Q8TDY2 1594 aa8.48□□□□□ -1.05
CDH8-206ENST00000580044 NBPF26B4DH59 902 aa8.48□□□□□ -1.05
CDH8-206ENST00000580044 WBP1LQ9NX94 342 aa8.48□□□□□ -1.05
CDH8-206ENST00000580044 ITGBL1O95965 494 aaPredicted RBP8.47□□□□□ -1.05
CDH8-206ENST00000580044 PRSS12P56730 875 aa8.47□□□□□ -1.05
CDH8-206ENST00000580044 CDCA7LQ96GN5 454 aa8.47□□□□□ -1.05
CDH8-206ENST00000580044 PCGF6Q9BYE7 350 aa8.47□□□□□ -1.05
CDH8-206ENST00000580044 TSR1Q2NL82 804 aaKnown RBP8.46□□□□□ -1.06
CDH8-206ENST00000580044 ARIH1Q9Y4X5 557 aaPredicted RBP8.46□□□□□ -1.06
CDH8-206ENST00000580044 SCRIBQ14160 1630 aa8.46□□□□□ -1.06
CDH8-206ENST00000580044 NACADO15069 1562 aa8.44□□□□□ -1.06
CDH8-206ENST00000580044 PNMA3Q9UL41 463 aa8.44□□□□□ -1.06
CDH8-206ENST00000580044 RNF40O75150 1001 aa8.43□□□□□ -1.06
CDH8-206ENST00000580044 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
CDH8-206ENST00000580044 RSF1Q96T23 1441 aaPredicted RBP8.43□□□□□ -1.06
CDH8-206ENST00000580044 TRIM26Q12899 539 aaPredicted RBP8.42□□□□□ -1.06
CDH8-206ENST00000580044 TATDN2Q93075 761 aa8.42□□□□□ -1.06
CDH8-206ENST00000580044 ZEB1P37275 1124 aaPredicted RBP8.4□□□□□ -1.06
CDH8-206ENST00000580044 SAMD7Q7Z3H4 446 aa8.4□□□□□ -1.06
CDH8-206ENST00000580044 RBM27Q9P2N5 1060 aaKnown RBP8.4□□□□□ -1.06
CDH8-206ENST00000580044 SMAPO00193 183 aa8.38□□□□□ -1.07
CDH8-206ENST00000580044 NUDT18Q6ZVK8 323 aa8.37□□□□□ -1.07
CDH8-206ENST00000580044 SLF2Q8IX21 1173 aa8.37□□□□□ -1.07
CDH8-206ENST00000580044 OSBPP22059 807 aa8.36□□□□□ -1.07
CDH8-206ENST00000580044 LAPTM4AQ15012 233 aa8.36□□□□□ -1.07
CDH8-206ENST00000580044 PRR14Q9BWN1 585 aa8.36□□□□□ -1.07
CDH8-206ENST00000580044 IL21Q9HBE4 155 aa8.36□□□□□ -1.07
CDH8-206ENST00000580044 GGCXP38435 758 aa8.35□□□□□ -1.07
CDH8-206ENST00000580044 ARHGEF1Q92888 912 aaKnown RBP8.35□□□□□ -1.07
CDH8-206ENST00000580044 Q6ZNB5 142 aa8.34□□□□□ -1.07
CDH8-206ENST00000580044 P3H3Q8IVL6 736 aa8.33□□□□□ -1.08
CDH8-206ENST00000580044 BAZ1AQ9NRL2 1556 aaPredicted RBP8.32□□□□□ -1.08
CDH8-206ENST00000580044 LOC105371045A0A1W2PR82 267 aa8.31□□□□□ -1.08
CDH8-206ENST00000580044 CDHR5Q9HBB8 845 aa8.31□□□□□ -1.08
CDH8-206ENST00000580044 PADI6Q6TGC4 694 aa8.3□□□□□ -1.08
CDH8-206ENST00000580044 MTRQ99707 1265 aa8.3□□□□□ -1.08
CDH8-206ENST00000580044 TJAP1Q5JTD0 557 aa8.29□□□□□ -1.08
CDH8-206ENST00000580044 RBM46Q8TBY0 533 aaKnown RBP8.29□□□□□ -1.08
CDH8-206ENST00000580044 FAM198AQ9UFP1 575 aa8.29□□□□□ -1.08
CDH8-206ENST00000580044 SWT1Q5T5J6 900 aaKnown RBP8.28□□□□□ -1.08
CDH8-206ENST00000580044 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
CDH8-206ENST00000580044 EIF4G1Q04637 1599 aaKnown RBP8.27□□□□□ -1.09
CDH8-206ENST00000580044 GFRA3O60609 400 aa8.26□□□□□ -1.09
CDH8-206ENST00000580044 PRIM1P49642 420 aaKnown RBP8.26□□□□□ -1.09
CDH8-206ENST00000580044 RSPH4AQ5TD94 716 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms