RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 KIAA0586Q9BVV6 1533 aa18■□□□□ 0.47
NDEL1-204ENST00000578172 ADAMTS8Q9UP79 889 aa17.99■□□□□ 0.47
NDEL1-204ENST00000578172 RRP7AQ9Y3A4 280 aaKnown RBP17.99■□□□□ 0.47
NDEL1-204ENST00000578172 NEFMP07197 916 aa17.99■□□□□ 0.47
NDEL1-204ENST00000578172 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
NDEL1-204ENST00000578172 C20orf194Q5TEA3 1177 aa17.98■□□□□ 0.47
NDEL1-204ENST00000578172 KDM5BQ9UGL1 1544 aa17.98■□□□□ 0.47
NDEL1-204ENST00000578172 ERICH6BQ5W0A0 696 aa17.98■□□□□ 0.47
NDEL1-204ENST00000578172 KIF3BO15066 747 aa17.97■□□□□ 0.47
NDEL1-204ENST00000578172 GRIN2AQ12879 1464 aa17.97■□□□□ 0.47
NDEL1-204ENST00000578172 WDR62O43379 1518 aa17.97■□□□□ 0.47
NDEL1-204ENST00000578172 ROCK1Q13464 1354 aa17.96■□□□□ 0.47
NDEL1-204ENST00000578172 IPO9Q96P70 1041 aaKnown RBP17.96■□□□□ 0.47
NDEL1-204ENST00000578172 DHX29Q7Z478 1369 aaKnown RBP17.96■□□□□ 0.47
NDEL1-204ENST00000578172 PZPP20742 1482 aa17.95■□□□□ 0.46
NDEL1-204ENST00000578172 TCOF1Q13428 1488 aaKnown RBP17.95■□□□□ 0.46
NDEL1-204ENST00000578172 PDE4AP27815 886 aa17.95■□□□□ 0.46
NDEL1-204ENST00000578172 DISP1Q96F81 1524 aa17.95■□□□□ 0.46
NDEL1-204ENST00000578172 GGT6Q6P531 493 aa17.95■□□□□ 0.46
NDEL1-204ENST00000578172 TEX14Q8IWB6 1497 aa17.95■□□□□ 0.46
NDEL1-204ENST00000578172 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
NDEL1-204ENST00000578172 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.93■□□□□ 0.46
NDEL1-204ENST00000578172 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
NDEL1-204ENST00000578172 APAF1O14727 1248 aa17.92■□□□□ 0.46
NDEL1-204ENST00000578172 TRAK1Q9UPV9 953 aa17.9■□□□□ 0.46
NDEL1-204ENST00000578172 CLUAP1Q96AJ1 413 aa17.9■□□□□ 0.46
NDEL1-204ENST00000578172 SMG6Q86US8 1419 aaKnown RBP17.9■□□□□ 0.46
NDEL1-204ENST00000578172 KIF14Q15058 1648 aa17.89■□□□□ 0.45
NDEL1-204ENST00000578172 ADAMTS12P58397 1594 aa17.89■□□□□ 0.45
NDEL1-204ENST00000578172 PLPPR3Q6T4P5 718 aa17.89■□□□□ 0.45
NDEL1-204ENST00000578172 TARBP1Q13395 1621 aaKnown RBP17.88■□□□□ 0.45
NDEL1-204ENST00000578172 DISP3Q9P2K9 1392 aa17.88■□□□□ 0.45
NDEL1-204ENST00000578172 CFAP70Q5T0N1 1121 aa17.88■□□□□ 0.45
NDEL1-204ENST00000578172 STK26Q9P289 416 aa17.88■□□□□ 0.45
NDEL1-204ENST00000578172 EFCAB2Q5VUJ9 269 aa17.87■□□□□ 0.45
NDEL1-204ENST00000578172 SPATA31E1Q6ZUB1 1445 aa17.87■□□□□ 0.45
NDEL1-204ENST00000578172 SPAG9O60271 1321 aaKnown RBP17.86■□□□□ 0.45
NDEL1-204ENST00000578172 PPM1GO15355 546 aaPredicted RBP17.86■□□□□ 0.45
NDEL1-204ENST00000578172 SPRYD3Q8NCJ5 442 aa17.86■□□□□ 0.45
NDEL1-204ENST00000578172 RAPGEF6Q8TEU7 1601 aa17.85■□□□□ 0.45
NDEL1-204ENST00000578172 TMEM132EQ6IEE7 984 aa17.85■□□□□ 0.45
NDEL1-204ENST00000578172 KIAA0556O60303 1618 aa17.85■□□□□ 0.45
NDEL1-204ENST00000578172 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
NDEL1-204ENST00000578172 ATP10BO94823 1461 aa17.84■□□□□ 0.45
NDEL1-204ENST00000578172 PBRM1Q86U86 1689 aa17.83■□□□□ 0.44
NDEL1-204ENST00000578172 BCAR3O75815 825 aa17.82■□□□□ 0.44
NDEL1-204ENST00000578172 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
NDEL1-204ENST00000578172 ARHGAP5Q13017 1502 aa17.82■□□□□ 0.44
NDEL1-204ENST00000578172 GOLGA2Q08379 1002 aa17.82■□□□□ 0.44
NDEL1-204ENST00000578172 PLEKHH2Q8IVE3 1493 aa17.81■□□□□ 0.44
NDEL1-204ENST00000578172 PPP2R1AP30153 589 aa17.81■□□□□ 0.44
NDEL1-204ENST00000578172 TCERG1O14776 1098 aaKnown RBP17.8■□□□□ 0.44
NDEL1-204ENST00000578172 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
NDEL1-204ENST00000578172 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.79■□□□□ 0.44
NDEL1-204ENST00000578172 COG6Q9Y2V7 657 aa17.79■□□□□ 0.44
NDEL1-204ENST00000578172 DNMT1P26358 1616 aaKnown RBP17.79■□□□□ 0.44
NDEL1-204ENST00000578172 GCC2Q8IWJ2 1684 aa17.78■□□□□ 0.44
NDEL1-204ENST00000578172 MORC1Q86VD1 984 aa17.77■□□□□ 0.44
NDEL1-204ENST00000578172 PANK1Q8TE04 598 aa17.77■□□□□ 0.43
NDEL1-204ENST00000578172 SYNJ2O15056 1496 aa17.76■□□□□ 0.43
NDEL1-204ENST00000578172 TESK2Q96S53 571 aa17.76■□□□□ 0.43
NDEL1-204ENST00000578172 SLKQ9H2G2 1235 aaPredicted RBP17.75■□□□□ 0.43
NDEL1-204ENST00000578172 BCORL1Q5H9F3 1711 aa17.75■□□□□ 0.43
NDEL1-204ENST00000578172 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
NDEL1-204ENST00000578172 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
NDEL1-204ENST00000578172 PDE3BQ13370 1112 aa17.73■□□□□ 0.43
NDEL1-204ENST00000578172 SLC12A5Q9H2X9 1139 aa17.73■□□□□ 0.43
NDEL1-204ENST00000578172 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
NDEL1-204ENST00000578172 ERBINQ96RT1 1412 aa17.72■□□□□ 0.43
NDEL1-204ENST00000578172 ARID4BQ4LE39 1312 aaPredicted RBP17.72■□□□□ 0.43
NDEL1-204ENST00000578172 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
NDEL1-204ENST00000578172 CDCA8Q53HL2 280 aa17.72■□□□□ 0.43
NDEL1-204ENST00000578172 IL27Q8NEV9 243 aa17.72■□□□□ 0.43
NDEL1-204ENST00000578172 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
NDEL1-204ENST00000578172 RSPH4AQ5TD94 716 aa17.72■□□□□ 0.43
NDEL1-204ENST00000578172 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
NDEL1-204ENST00000578172 U2AF1L5P0DN76 240 aaPredicted RBP17.71■□□□□ 0.43
NDEL1-204ENST00000578172 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.431e-9■□□□□ 8.6
NDEL1-204ENST00000578172 BACH2Q9BYV9 841 aa17.71■□□□□ 0.43
NDEL1-204ENST00000578172 CEP170Q5SW79 1584 aa17.7■□□□□ 0.42
NDEL1-204ENST00000578172 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
NDEL1-204ENST00000578172 SRPK2P78362 688 aaKnown RBP17.68■□□□□ 0.42
NDEL1-204ENST00000578172 MLECQ14165 292 aa17.68■□□□□ 0.42
NDEL1-204ENST00000578172 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
NDEL1-204ENST00000578172 CCDC141Q6ZP82 1450 aa17.68■□□□□ 0.42
NDEL1-204ENST00000578172 RALGAPBQ86X10 1494 aa17.68■□□□□ 0.42
NDEL1-204ENST00000578172 ADGRF5Q8IZF2 1346 aa17.67■□□□□ 0.42
NDEL1-204ENST00000578172 SYCP2Q9BX26 1530 aa17.67■□□□□ 0.42
NDEL1-204ENST00000578172 TNNQ9UQP3 1299 aa17.66■□□□□ 0.42
NDEL1-204ENST00000578172 SOX12O15370 315 aa17.65■□□□□ 0.42
NDEL1-204ENST00000578172 PRAG1Q86YV5 1406 aa17.65■□□□□ 0.42
NDEL1-204ENST00000578172 SCAPERQ9BY12 1400 aa17.65■□□□□ 0.42
NDEL1-204ENST00000578172 PLEKHH1Q9ULM0 1364 aa17.64■□□□□ 0.41
NDEL1-204ENST00000578172 SLC24A1O60721 1099 aa17.63■□□□□ 0.41
NDEL1-204ENST00000578172 CABP2Q9NPB3 220 aa17.63■□□□□ 0.41
NDEL1-204ENST00000578172 FAM135AQ9P2D6 1515 aa17.63■□□□□ 0.41
NDEL1-204ENST00000578172 DUSP27Q5VZP5 1158 aa17.63■□□□□ 0.41
NDEL1-204ENST00000578172 FTSJ3Q8IY81 847 aaKnown RBP17.63■□□□□ 0.41
NDEL1-204ENST00000578172 PRKCSHP14314 528 aaPredicted RBP17.63■□□□□ 0.41
NDEL1-204ENST00000578172 ELL2O00472 640 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms