RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
PTPRM-206ENST00000578093 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
PTPRM-206ENST00000578093 FRMPD1Q5SYB0 1578 aa6.94□□□□□ -1.3
PTPRM-206ENST00000578093 ADAMTSL3P82987 1691 aa6.93□□□□□ -1.3
PTPRM-206ENST00000578093 ABCA9Q8IUA7 1624 aa6.92□□□□□ -1.3
PTPRM-206ENST00000578093 CD109Q6YHK3 1445 aa6.92□□□□□ -1.3
PTPRM-206ENST00000578093 MADDQ8WXG6 1647 aa6.91□□□□□ -1.3
PTPRM-206ENST00000578093 TSPYL2Q9H2G4 693 aaPredicted RBP6.91□□□□□ -1.3
PTPRM-206ENST00000578093 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.91□□□□□ -1.3
PTPRM-206ENST00000578093 TAOK2Q9UL54 1235 aa6.91□□□□□ -1.3
PTPRM-206ENST00000578093 BCORL1Q5H9F3 1711 aa6.9□□□□□ -1.3
PTPRM-206ENST00000578093 SIGLEC1Q9BZZ2 1709 aa6.9□□□□□ -1.3
PTPRM-206ENST00000578093 SAMD9Q5K651 1589 aa6.9□□□□□ -1.31
PTPRM-206ENST00000578093 RGL2O15211 777 aa6.89□□□□□ -1.31
PTPRM-206ENST00000578093 CHRM1P11229 460 aaPredicted RBP6.89□□□□□ -1.31
PTPRM-206ENST00000578093 PTGER2P43116 358 aa6.89□□□□□ -1.31
PTPRM-206ENST00000578093 GOLGA3Q08378 1498 aa6.89□□□□□ -1.31
PTPRM-206ENST00000578093 PRXQ9BXM0 1461 aa6.89□□□□□ -1.31
PTPRM-206ENST00000578093 ARAP3Q8WWN8 1544 aa6.89□□□□□ -1.31
PTPRM-206ENST00000578093 RIMS1Q86UR5 1692 aaKnown RBP6.89□□□□□ -1.31
PTPRM-206ENST00000578093 RICTORQ6R327 1708 aa6.88□□□□□ -1.31
PTPRM-206ENST00000578093 RAPGEF6Q8TEU7 1601 aa6.88□□□□□ -1.31
PTPRM-206ENST00000578093 PTPRMP28827 1452 aa6.88□□□□□ -1.31
PTPRM-206ENST00000578093 MAP3K13O43283 966 aa6.88□□□□□ -1.31
PTPRM-206ENST00000578093 PLCG2P16885 1265 aa6.88□□□□□ -1.31
PTPRM-206ENST00000578093 IRX5P78411 483 aaPredicted RBP6.88□□□□□ -1.31
PTPRM-206ENST00000578093 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
PTPRM-206ENST00000578093 ARHGEF40Q8TER5 1519 aa6.87□□□□□ -1.31
PTPRM-206ENST00000578093 ATP10BO94823 1461 aa6.87□□□□□ -1.31
PTPRM-206ENST00000578093 ARID3CA6NKF2 412 aa6.87□□□□□ -1.31
PTPRM-206ENST00000578093 PYGBP11216 843 aa6.87□□□□□ -1.31
PTPRM-206ENST00000578093 KCNH8Q96L42 1107 aa6.87□□□□□ -1.31
PTPRM-206ENST00000578093 PCF11O94913 1555 aaKnown RBP6.86□□□□□ -1.31
PTPRM-206ENST00000578093 LMTK3Q96Q04 1460 aa6.85□□□□□ -1.31
PTPRM-206ENST00000578093 RIOK3O14730 519 aaKnown RBP6.85□□□□□ -1.31
PTPRM-206ENST00000578093 TTC37Q6PGP7 1564 aa6.84□□□□□ -1.31
PTPRM-206ENST00000578093 NUP153P49790 1475 aaKnown RBP6.84□□□□□ -1.31
PTPRM-206ENST00000578093 P3H3Q8IVL6 736 aa6.83□□□□□ -1.32
PTPRM-206ENST00000578093 NEO1Q92859 1461 aa6.83□□□□□ -1.32
PTPRM-206ENST00000578093 FER1L4A9Z1Z3 1794 aa6.82□□□□□ -1.32
PTPRM-206ENST00000578093 VGFO15240 615 aaPredicted RBP6.82□□□□□ -1.32
PTPRM-206ENST00000578093 RAPGEF3O95398 923 aa6.82□□□□□ -1.32
PTPRM-206ENST00000578093 ZNF467Q7Z7K2 595 aaPredicted RBP6.82□□□□□ -1.32
PTPRM-206ENST00000578093 CFAP74Q9C0B2 1584 aa6.82□□□□□ -1.32
PTPRM-206ENST00000578093 ZMYM4Q5VZL5 1548 aa6.81□□□□□ -1.32
PTPRM-206ENST00000578093 CHGAP10645 457 aaKnown RBP6.81□□□□□ -1.32
PTPRM-206ENST00000578093 FBXO41Q8TF61 875 aa6.81□□□□□ -1.32
PTPRM-206ENST00000578093 RNF25Q96BH1 459 aaPredicted RBP6.81□□□□□ -1.32
PTPRM-206ENST00000578093 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.81□□□□□ -1.32
PTPRM-206ENST00000578093 FHOD3Q2V2M9 1422 aa6.81□□□□□ -1.32
PTPRM-206ENST00000578093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.81□□□□□ -1.32
PTPRM-206ENST00000578093 BBXQ8WY36 941 aaPredicted RBP6.8□□□□□ -1.32
PTPRM-206ENST00000578093 SGIP1Q9BQI5 828 aa6.8□□□□□ -1.32
PTPRM-206ENST00000578093 YEATS2Q9ULM3 1422 aa6.8□□□□□ -1.32
PTPRM-206ENST00000578093 HECW1Q76N89 1606 aa6.79□□□□□ -1.32
PTPRM-206ENST00000578093 CDK13Q14004 1512 aaKnown RBP6.79□□□□□ -1.32
PTPRM-206ENST00000578093 ZFYVE16Q7Z3T8 1539 aa6.79□□□□□ -1.32
PTPRM-206ENST00000578093 EFCAB5A4FU69 1503 aa6.78□□□□□ -1.32
PTPRM-206ENST00000578093 PCDHB13Q9Y5F0 798 aa6.78□□□□□ -1.32
PTPRM-206ENST00000578093 PHLDB1Q86UU1 1377 aa6.78□□□□□ -1.32
PTPRM-206ENST00000578093 LRRIQ1Q96JM4 1722 aa6.78□□□□□ -1.32
PTPRM-206ENST00000578093 FANCAO15360 1455 aa6.78□□□□□ -1.32
PTPRM-206ENST00000578093 DENND4BO75064 1496 aaPredicted RBP6.78□□□□□ -1.32
PTPRM-206ENST00000578093 PREX1Q8TCU6 1659 aa6.77□□□□□ -1.32
PTPRM-206ENST00000578093 MYO5CQ9NQX4 1742 aa6.77□□□□□ -1.33
PTPRM-206ENST00000578093 RGS20O76081 388 aa6.77□□□□□ -1.33
PTPRM-206ENST00000578093 HSPA2P54652 639 aa6.77□□□□□ -1.33
PTPRM-206ENST00000578093 HS6ST3Q8IZP7 471 aa6.77□□□□□ -1.33
PTPRM-206ENST00000578093 AKNAQ7Z591 1439 aa6.76□□□□□ -1.33
PTPRM-206ENST00000578093 KIF14Q15058 1648 aa6.76□□□□□ -1.33
PTPRM-206ENST00000578093 STK25O00506 426 aa6.76□□□□□ -1.33
PTPRM-206ENST00000578093 STRCQ7RTU9 1775 aa6.76□□□□□ -1.33
PTPRM-206ENST00000578093 ARHGEF12Q9NZN5 1544 aa6.76□□□□□ -1.33
PTPRM-206ENST00000578093 ARID4BQ4LE39 1312 aaPredicted RBP6.76□□□□□ -1.33
PTPRM-206ENST00000578093 SLC24A1O60721 1099 aa6.75□□□□□ -1.33
PTPRM-206ENST00000578093 HOXB1P14653 301 aaPredicted RBP6.75□□□□□ -1.33
PTPRM-206ENST00000578093 PDAP1Q13442 181 aaKnown RBP6.75□□□□□ -1.33
PTPRM-206ENST00000578093 OCEL1Q9H607 264 aa6.75□□□□□ -1.33
PTPRM-206ENST00000578093 PCDHB8Q9UN66 801 aa6.75□□□□□ -1.33
PTPRM-206ENST00000578093 POGZQ7Z3K3 1410 aa6.75□□□□□ -1.33
PTPRM-206ENST00000578093 ERBB3P21860 1342 aa6.75□□□□□ -1.33
PTPRM-206ENST00000578093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.74□□□□□ -1.33
PTPRM-206ENST00000578093 ZFP91Q96JP5 570 aaPredicted RBP6.74□□□□□ -1.33
PTPRM-206ENST00000578093 STK24Q9Y6E0 443 aa6.74□□□□□ -1.33
PTPRM-206ENST00000578093 ABCA6Q8N139 1617 aa6.73□□□□□ -1.33
PTPRM-206ENST00000578093 RANGAP1P46060 587 aaPredicted RBP6.73□□□□□ -1.33
PTPRM-206ENST00000578093 PLCB2Q00722 1185 aa6.73□□□□□ -1.33
PTPRM-206ENST00000578093 C3P01024 1663 aa6.73□□□□□ -1.33
PTPRM-206ENST00000578093 KDM5CP41229 1560 aa6.73□□□□□ -1.33
PTPRM-206ENST00000578093 DIP2CQ9Y2E4 1556 aa6.73□□□□□ -1.33
PTPRM-206ENST00000578093 HOXB3P14651 431 aaPredicted RBP6.72□□□□□ -1.33
PTPRM-206ENST00000578093 IFNL1Q8IU54 200 aa6.72□□□□□ -1.33
PTPRM-206ENST00000578093 CDC42BPBQ9Y5S2 1711 aa6.72□□□□□ -1.33
PTPRM-206ENST00000578093 MAGI2Q86UL8 1455 aa6.72□□□□□ -1.33
PTPRM-206ENST00000578093 C9orf84Q5VXU9 1444 aa6.71□□□□□ -1.34
PTPRM-206ENST00000578093 SCAPERQ9BY12 1400 aa6.71□□□□□ -1.34
PTPRM-206ENST00000578093 PSEN1P49768 467 aa6.71□□□□□ -1.34
PTPRM-206ENST00000578093 MLECQ14165 292 aa6.71□□□□□ -1.34
PTPRM-206ENST00000578093 ZNF687Q8N1G0 1237 aa6.71□□□□□ -1.34
PTPRM-206ENST00000578093 SPRYD3Q8NCJ5 442 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms