RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 SPNS2Q8IVW8 549 aa15.21■□□□□ 0.03
SNRPD1-202ENST00000577906 RBM33Q96EV2 1170 aaKnown RBP15.21■□□□□ 0.03
SNRPD1-202ENST00000577906 EN1Q05925 392 aaPredicted RBP15.2■□□□□ 0.02
SNRPD1-202ENST00000577906 TK2O00142 265 aa15.19■□□□□ 0.02
SNRPD1-202ENST00000577906 C6orf132Q5T0Z8 1188 aa15.19■□□□□ 0.02
SNRPD1-202ENST00000577906 MAP3K7O43318 606 aa15.18■□□□□ 0.02
SNRPD1-202ENST00000577906 OSBPP22059 807 aa15.17■□□□□ 0.02
SNRPD1-202ENST00000577906 PPP1R3GB7ZBB8 358 aa15.16■□□□□ 0.02
SNRPD1-202ENST00000577906 SEMA3EO15041 775 aa15.16■□□□□ 0.02
SNRPD1-202ENST00000577906 MLLT3P42568 568 aaPredicted RBP15.16■□□□□ 0.02
SNRPD1-202ENST00000577906 ADGRD1Q6QNK2 874 aa15.15■□□□□ 0.02
SNRPD1-202ENST00000577906 SLC4A5Q9BY07 1137 aa15.15■□□□□ 0.02
SNRPD1-202ENST00000577906 ZBED2Q9BTP6 218 aa15.12■□□□□ 0.01
SNRPD1-202ENST00000577906 VPS9D1Q9Y2B5 631 aa15.11■□□□□ 0.01
SNRPD1-202ENST00000577906 COL9A1P20849 921 aa15.1■□□□□ 0.01
SNRPD1-202ENST00000577906 PRIM1P49642 420 aaKnown RBP15.1■□□□□ 0.01
SNRPD1-202ENST00000577906 SMYD5Q6GMV2 418 aa15.1■□□□□ 0.01
SNRPD1-202ENST00000577906 TESPA1A2RU30 521 aaPredicted RBP15.09■□□□□ 0.01
SNRPD1-202ENST00000577906 TSR1Q2NL82 804 aaKnown RBP15.09■□□□□ 0.01
SNRPD1-202ENST00000577906 SLC24A1O60721 1099 aa15.07■□□□□ 0
SNRPD1-202ENST00000577906 CERKQ8TCT0 537 aa15.07■□□□□ 0
SNRPD1-202ENST00000577906 STAC3Q96MF2 364 aa15.07■□□□□ 0
SNRPD1-202ENST00000577906 MMRN1Q13201 1228 aa15.06■□□□□ 0
SNRPD1-202ENST00000577906 MYT1LQ9UL68 1186 aa15.05■□□□□ -0
SNRPD1-202ENST00000577906 HRO43593 1189 aa15.04■□□□□ -0
SNRPD1-202ENST00000577906 ONECUT3O60422 494 aaPredicted RBP15.02■□□□□ -0
SNRPD1-202ENST00000577906 PROX2Q3B8N5 592 aa15.01□□□□□ -0.01
SNRPD1-202ENST00000577906 CDHR5Q9HBB8 845 aa15□□□□□ -0.01
SNRPD1-202ENST00000577906 RABGEF1Q9UJ41 708 aa15□□□□□ -0.01
SNRPD1-202ENST00000577906 TRIM6-TRIM34B2RNG4 842 aa14.98□□□□□ -0.01
SNRPD1-202ENST00000577906 NBPF3Q9H094 633 aa14.98□□□□□ -0.01
SNRPD1-202ENST00000577906 BHMG1C9JSJ3 638 aaPredicted RBP14.97□□□□□ -0.01
SNRPD1-202ENST00000577906 TULP1O00294 542 aaPredicted RBP14.97□□□□□ -0.01
SNRPD1-202ENST00000577906 NUTM2FA1L443 756 aa14.96□□□□□ -0.01
SNRPD1-202ENST00000577906 PRSS12P56730 875 aa14.96□□□□□ -0.01
SNRPD1-202ENST00000577906 RNF166Q96A37 237 aaPredicted RBP14.96□□□□□ -0.01
SNRPD1-202ENST00000577906 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
SNRPD1-202ENST00000577906 KIAA1468Q9P260 1216 aa14.95□□□□□ -0.02
SNRPD1-202ENST00000577906 PACS2Q86VP3 889 aa14.94□□□□□ -0.02
SNRPD1-202ENST00000577906 MRPL50Q8N5N7 158 aaKnown RBP14.94□□□□□ -0.02
SNRPD1-202ENST00000577906 NPDC1Q9NQX5 325 aaPredicted RBP14.94□□□□□ -0.02
SNRPD1-202ENST00000577906 RBM27Q9P2N5 1060 aaKnown RBP14.93□□□□□ -0.02
SNRPD1-202ENST00000577906 RBM26Q5T8P6 1007 aaKnown RBP14.91□□□□□ -0.02
SNRPD1-202ENST00000577906 TSKSQ9UJT2 592 aa14.91□□□□□ -0.02
SNRPD1-202ENST00000577906 GOLGA8CPA6NN73 597 aa14.9□□□□□ -0.02
SNRPD1-202ENST00000577906 PTGDRQ13258 359 aa14.9□□□□□ -0.02
SNRPD1-202ENST00000577906 LAPTM4BQ86VI4 370 aa14.89□□□□□ -0.03
SNRPD1-202ENST00000577906 FCHSD2O94868 740 aa14.88□□□□□ -0.03
SNRPD1-202ENST00000577906 PADI6Q6TGC4 694 aa14.85□□□□□ -0.03
SNRPD1-202ENST00000577906 NBPF26B4DH59 902 aa14.84□□□□□ -0.03
SNRPD1-202ENST00000577906 TTC13Q8NBP0 860 aa14.84□□□□□ -0.03
SNRPD1-202ENST00000577906 FAM198AQ9UFP1 575 aa14.84□□□□□ -0.03
SNRPD1-202ENST00000577906 KCTD12Q96CX2 325 aaKnown RBP14.83□□□□□ -0.04
SNRPD1-202ENST00000577906 SEPT9Q9UHD8 586 aaPredicted RBP14.82□□□□□ -0.04
SNRPD1-202ENST00000577906 HIC1Q14526 733 aa14.81□□□□□ -0.04
SNRPD1-202ENST00000577906 FAM98CQ17RN3 349 aaKnown RBP14.81□□□□□ -0.04
SNRPD1-202ENST00000577906 TATDN2Q93075 761 aa14.81□□□□□ -0.04
SNRPD1-202ENST00000577906 WNT2BQ93097 391 aa14.81□□□□□ -0.04
SNRPD1-202ENST00000577906 GPIHBP1Q8IV16 184 aa14.8□□□□□ -0.04
SNRPD1-202ENST00000577906 PNMA3Q9UL41 463 aa14.8□□□□□ -0.04
SNRPD1-202ENST00000577906 ZFRQ96KR1 1074 aaKnown RBP14.78□□□□□ -0.04
SNRPD1-202ENST00000577906 ANKK1Q8NFD2 765 aa14.77□□□□□ -0.05
SNRPD1-202ENST00000577906 NUDT18Q6ZVK8 323 aa14.76□□□□□ -0.05
SNRPD1-202ENST00000577906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.76□□□□□ -0.05
SNRPD1-202ENST00000577906 HCSTQ9UBK5 93 aa14.76□□□□□ -0.05
SNRPD1-202ENST00000577906 SMAPO00193 183 aa14.75□□□□□ -0.05
SNRPD1-202ENST00000577906 GNPATO15228 680 aa14.74□□□□□ -0.05
SNRPD1-202ENST00000577906 GPR37O15354 613 aa14.73□□□□□ -0.05
SNRPD1-202ENST00000577906 THSD4Q6ZMP0 1018 aa14.73□□□□□ -0.05
SNRPD1-202ENST00000577906 C3orf80F5H4A9 247 aa14.72□□□□□ -0.05
SNRPD1-202ENST00000577906 LMOD2Q6P5Q4 547 aa14.7□□□□□ -0.06
SNRPD1-202ENST00000577906 RBM46Q8TBY0 533 aaKnown RBP14.7□□□□□ -0.06
SNRPD1-202ENST00000577906 HDGFP51858 240 aaKnown RBP14.69□□□□□ -0.06
SNRPD1-202ENST00000577906 EYA1Q99502 592 aa14.69□□□□□ -0.06
SNRPD1-202ENST00000577906 ADGRG1Q9Y653 693 aa14.69□□□□□ -0.06
SNRPD1-202ENST00000577906 SOWAHBA6NEL2 793 aa14.68□□□□□ -0.06
SNRPD1-202ENST00000577906 LRCH3Q96II8 777 aa14.68□□□□□ -0.06
SNRPD1-202ENST00000577906 PTPN5P54829 565 aa14.67□□□□□ -0.06
SNRPD1-202ENST00000577906 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.67□□□□□ -0.06
SNRPD1-202ENST00000577906 OATP04181 439 aa14.66□□□□□ -0.06
SNRPD1-202ENST00000577906 BCAMP50895 628 aa14.65□□□□□ -0.06
SNRPD1-202ENST00000577906 BCANQ96GW7 911 aa14.65□□□□□ -0.06
SNRPD1-202ENST00000577906 FECHP22830 423 aa14.64□□□□□ -0.07
SNRPD1-202ENST00000577906 SAMD7Q7Z3H4 446 aa14.64□□□□□ -0.07
SNRPD1-202ENST00000577906 FAM161AQ3B820 660 aa14.62□□□□□ -0.07
SNRPD1-202ENST00000577906 DNAJB2P25686 324 aa14.61□□□□□ -0.07
SNRPD1-202ENST00000577906 TSR3Q9UJK0 312 aaKnown RBP14.6□□□□□ -0.07
SNRPD1-202ENST00000577906 SLC4A3P48751 1232 aa14.59□□□□□ -0.07
SNRPD1-202ENST00000577906 PXYLP1Q8TE99 480 aa14.59□□□□□ -0.07
SNRPD1-202ENST00000577906 HPS5Q9UPZ3 1129 aa14.59□□□□□ -0.07
SNRPD1-202ENST00000577906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.57□□□□□ -0.08
SNRPD1-202ENST00000577906 RCCD1A6NED2 376 aa14.57□□□□□ -0.08
SNRPD1-202ENST00000577906 SWT1Q5T5J6 900 aaKnown RBP14.57□□□□□ -0.08
SNRPD1-202ENST00000577906 NYAP1Q6ZVC0 841 aa14.57□□□□□ -0.08
SNRPD1-202ENST00000577906 METTL3Q86U44 580 aaKnown RBP14.57□□□□□ -0.08
SNRPD1-202ENST00000577906 PPP4CP60510 307 aa14.56□□□□□ -0.08
SNRPD1-202ENST00000577906 MAP2K5Q13163 448 aa14.56□□□□□ -0.08
SNRPD1-202ENST00000577906 SLF2Q8IX21 1173 aa14.55□□□□□ -0.08
SNRPD1-202ENST00000577906 NECTIN2Q92692 538 aa14.55□□□□□ -0.08
SNRPD1-202ENST00000577906 WBP1LQ9NX94 342 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms