RNA–Protein interactions for RNA: ENST00000576625.5

LCMT1-212, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-212ENST00000576625 ITSN2Q9NZM3 1697 aa14.22□□□□□ -0.13
LCMT1-212ENST00000576625 TROQ12816 1431 aaPredicted RBP14.21□□□□□ -0.13
LCMT1-212ENST00000576625 PLXNC1O60486 1568 aa14.19□□□□□ -0.14
LCMT1-212ENST00000576625 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
LCMT1-212ENST00000576625 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
LCMT1-212ENST00000576625 LRRC7Q96NW7 1537 aa14.18□□□□□ -0.14
LCMT1-212ENST00000576625 RNF17Q9BXT8 1623 aaKnown RBP14.18□□□□□ -0.14
LCMT1-212ENST00000576625 MED14O60244 1454 aa14.18□□□□□ -0.14
LCMT1-212ENST00000576625 SAMD9LQ8IVG5 1584 aa14.17□□□□□ -0.14
LCMT1-212ENST00000576625 PREX2Q70Z35 1606 aa14.17□□□□□ -0.14
LCMT1-212ENST00000576625 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
LCMT1-212ENST00000576625 SETD1AO15047 1707 aaKnown RBP14.16□□□□□ -0.14
LCMT1-212ENST00000576625 CDK11AQ9UQ88 783 aaPredicted RBP14.16□□□□□ -0.14
LCMT1-212ENST00000576625 SRCAPQ6ZRS2 3230 aa14.15□□□□□ -0.14
LCMT1-212ENST00000576625 DEPDC5O75140 1603 aa14.14□□□□□ -0.15
LCMT1-212ENST00000576625 NPHP4O75161 1426 aaPredicted RBP14.13□□□□□ -0.15
LCMT1-212ENST00000576625 SYNMO15061 1565 aa14.13□□□□□ -0.15
LCMT1-212ENST00000576625 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
LCMT1-212ENST00000576625 CLIP1P30622 1438 aa14.12□□□□□ -0.15
LCMT1-212ENST00000576625 ANKLE2Q86XL3 938 aa14.11□□□□□ -0.15
LCMT1-212ENST00000576625 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
LCMT1-212ENST00000576625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.1□□□□□ -0.15
LCMT1-212ENST00000576625 UPF1Q92900 1129 aaKnown RBP eCLIP14.1□□□□□ -0.15
LCMT1-212ENST00000576625 A2MP01023 1474 aa14.1□□□□□ -0.15
LCMT1-212ENST00000576625 TNRQ92752 1358 aa14.09□□□□□ -0.15
LCMT1-212ENST00000576625 CAPN15O75808 1086 aa14.09□□□□□ -0.15
LCMT1-212ENST00000576625 ATP7AQ04656 1500 aa14.09□□□□□ -0.15
LCMT1-212ENST00000576625 INO80Q9ULG1 1556 aaPredicted RBP14.09□□□□□ -0.15
LCMT1-212ENST00000576625 FMN1Q68DA7 1419 aa14.08□□□□□ -0.15
LCMT1-212ENST00000576625 SPAG9O60271 1321 aaKnown RBP14.08□□□□□ -0.16
LCMT1-212ENST00000576625 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
LCMT1-212ENST00000576625 FAM135BQ49AJ0 1406 aa14.07□□□□□ -0.16
LCMT1-212ENST00000576625 LRRIQ1Q96JM4 1722 aa14.07□□□□□ -0.16
LCMT1-212ENST00000576625 GGT6Q6P531 493 aa14.07□□□□□ -0.16
LCMT1-212ENST00000576625 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
LCMT1-212ENST00000576625 FBXO31Q5XUX0 539 aaPredicted RBP14.06□□□□□ -0.16
LCMT1-212ENST00000576625 SYCP2Q9BX26 1530 aa14.05□□□□□ -0.16
LCMT1-212ENST00000576625 THEMISQ8N1K5 641 aaPredicted RBP14.05□□□□□ -0.16
LCMT1-212ENST00000576625 PZPP20742 1482 aa14.05□□□□□ -0.16
LCMT1-212ENST00000576625 XIRP1Q702N8 1843 aaKnown RBP14.04□□□□□ -0.16
LCMT1-212ENST00000576625 CACNB1Q02641 598 aaPredicted RBP14.04□□□□□ -0.16
LCMT1-212ENST00000576625 ATP1B4Q9UN42 357 aaPredicted RBP14.04□□□□□ -0.16
LCMT1-212ENST00000576625 NLRP1Q9C000 1473 aa14.03□□□□□ -0.16
LCMT1-212ENST00000576625 ZC3H13Q5T200 1668 aaKnown RBP14.02□□□□□ -0.16
LCMT1-212ENST00000576625 UGGT1Q9NYU2 1555 aa14.02□□□□□ -0.16
LCMT1-212ENST00000576625 KIAA1107Q9UPP5 1409 aa14.02□□□□□ -0.16
LCMT1-212ENST00000576625 MIA2Q96PC5 1412 aa14.01□□□□□ -0.17
LCMT1-212ENST00000576625 FAM135AQ9P2D6 1515 aa14□□□□□ -0.17
LCMT1-212ENST00000576625 ARHGAP35Q9NRY4 1499 aa14□□□□□ -0.17
LCMT1-212ENST00000576625 HNRNPMP52272 730 aaKnown RBP eCLIP14□□□□□ -0.17
LCMT1-212ENST00000576625 ADGBQ8N7X0 1667 aa13.99□□□□□ -0.17
LCMT1-212ENST00000576625 EEA1Q15075 1411 aa13.98□□□□□ -0.17
LCMT1-212ENST00000576625 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
LCMT1-212ENST00000576625 KDM5DQ9BY66 1539 aa13.96□□□□□ -0.17
LCMT1-212ENST00000576625 ROBO1Q9Y6N7 1651 aa13.95□□□□□ -0.18
LCMT1-212ENST00000576625 PLEKHH2Q8IVE3 1493 aa13.95□□□□□ -0.18
LCMT1-212ENST00000576625 ZNF777Q9ULD5 760 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-212ENST00000576625 DHX29Q7Z478 1369 aaKnown RBP13.94□□□□□ -0.18
LCMT1-212ENST00000576625 CCDC18Q5T9S5 1454 aa13.92□□□□□ -0.18
LCMT1-212ENST00000576625 JCADQ9P266 1359 aa13.91□□□□□ -0.18
LCMT1-212ENST00000576625 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.18
LCMT1-212ENST00000576625 LRP6O75581 1613 aa13.9□□□□□ -0.18
LCMT1-212ENST00000576625 SCAF11Q99590 1463 aaKnown RBP13.9□□□□□ -0.18
LCMT1-212ENST00000576625 CDK12Q9NYV4 1490 aaPredicted RBP13.9□□□□□ -0.18
LCMT1-212ENST00000576625 MAP3K1Q13233 1512 aa13.9□□□□□ -0.19
LCMT1-212ENST00000576625 ARHGAP23Q9P227 1491 aa13.89□□□□□ -0.19
LCMT1-212ENST00000576625 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
LCMT1-212ENST00000576625 TRIM52Q96A61 297 aa13.89□□□□□ -0.19
LCMT1-212ENST00000576625 CASKIN1Q8WXD9 1431 aa13.89□□□□□ -0.19
LCMT1-212ENST00000576625 LRRC9Q6ZRR7 1453 aa13.88□□□□□ -0.19
LCMT1-212ENST00000576625 TMEM94Q12767 1356 aa13.88□□□□□ -0.19
LCMT1-212ENST00000576625 WASHC2CQ9Y4E1 1318 aa13.88□□□□□ -0.19
LCMT1-212ENST00000576625 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
LCMT1-212ENST00000576625 KIF3BO15066 747 aa13.87□□□□□ -0.19
LCMT1-212ENST00000576625 LTKP29376 864 aa13.87□□□□□ -0.19
LCMT1-212ENST00000576625 ZNF772Q68DY9 489 aaPredicted RBP13.87□□□□□ -0.19
LCMT1-212ENST00000576625 SLIT1O75093 1534 aa13.86□□□□□ -0.19
LCMT1-212ENST00000576625 POLA2Q14181 598 aa13.86□□□□□ -0.19
LCMT1-212ENST00000576625 PHLPP1O60346 1717 aa13.86□□□□□ -0.19
LCMT1-212ENST00000576625 UBR1Q8IWV7 1749 aa13.86□□□□□ -0.19
LCMT1-212ENST00000576625 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
LCMT1-212ENST00000576625 CFDP1Q9UEE9 299 aaPredicted RBP13.85□□□□□ -0.19
LCMT1-212ENST00000576625 ERVK-7P63135 1459 aa13.84□□□□□ -0.19
LCMT1-212ENST00000576625 SPATA31A6Q5VVP1 1343 aa13.84□□□□□ -0.19
LCMT1-212ENST00000576625 RXRBP28702 533 aa13.83□□□□□ -0.2
LCMT1-212ENST00000576625 DSG3P32926 999 aa13.83□□□□□ -0.2
LCMT1-212ENST00000576625 FGD6Q6ZV73 1430 aa13.82□□□□□ -0.2
LCMT1-212ENST00000576625 ZNF644Q9H582 1327 aaPredicted RBP13.82□□□□□ -0.2
LCMT1-212ENST00000576625 ABCC3O15438 1527 aa13.8□□□□□ -0.2
LCMT1-212ENST00000576625 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
LCMT1-212ENST00000576625 KCNA6P17658 529 aa13.8□□□□□ -0.2
LCMT1-212ENST00000576625 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
LCMT1-212ENST00000576625 TIAM1Q13009 1591 aa13.79□□□□□ -0.2
LCMT1-212ENST00000576625 SLAIN2Q9P270 581 aa13.79□□□□□ -0.2
LCMT1-212ENST00000576625 CCNB3Q8WWL7 1395 aa13.79□□□□□ -0.2
LCMT1-212ENST00000576625 ABCB7O75027 752 aa13.78□□□□□ -0.2
LCMT1-212ENST00000576625 RGS12O14924 1447 aa13.77□□□□□ -0.21
LCMT1-212ENST00000576625 CAMSAP2Q08AD1 1489 aa13.77□□□□□ -0.21
LCMT1-212ENST00000576625 NWD1Q149M9 1564 aa13.77□□□□□ -0.21
LCMT1-212ENST00000576625 SHPRHQ149N8 1683 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms