RNA–Protein interactions for RNA: ENST00000575978.1

EIF4A3-206, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

TSL 2

Gene EIF4A3, Length 3,593 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-206ENST00000575978 ATP10BO94823 1461 aa11.18□□□□□ -0.62
EIF4A3-206ENST00000575978 ANKRD50Q9ULJ7 1429 aa11.18□□□□□ -0.62
EIF4A3-206ENST00000575978 CHGAP10645 457 aaKnown RBP11.17□□□□□ -0.62
EIF4A3-206ENST00000575978 RSPH4AQ5TD94 716 aa11.16□□□□□ -0.62
EIF4A3-206ENST00000575978 B4GALNT3Q6L9W6 998 aa11.16□□□□□ -0.62
EIF4A3-206ENST00000575978 UHRF1BP1Q6BDS2 1440 aa11.16□□□□□ -0.62
EIF4A3-206ENST00000575978 EFCAB2Q5VUJ9 269 aa11.16□□□□□ -0.62
EIF4A3-206ENST00000575978 HOMEZQ8IX15 550 aa11.16□□□□□ -0.62
EIF4A3-206ENST00000575978 RALGAPBQ86X10 1494 aa11.15□□□□□ -0.62
EIF4A3-206ENST00000575978 C9orf84Q5VXU9 1444 aa11.15□□□□□ -0.63
EIF4A3-206ENST00000575978 KDM5DQ9BY66 1539 aa11.15□□□□□ -0.63
EIF4A3-206ENST00000575978 PPP4R2Q9NY27 417 aa11.14□□□□□ -0.63
EIF4A3-206ENST00000575978 E9PCH4 1651 aa11.14□□□□□ -0.63
EIF4A3-206ENST00000575978 CDC42BPBQ9Y5S2 1711 aa11.14□□□□□ -0.63
EIF4A3-206ENST00000575978 SHANK2Q9UPX8 1470 aa11.13□□□□□ -0.63
EIF4A3-206ENST00000575978 SALL2Q9Y467 1007 aaPredicted RBP11.13□□□□□ -0.63
EIF4A3-206ENST00000575978 SAMD9LQ8IVG5 1584 aa11.12□□□□□ -0.63
EIF4A3-206ENST00000575978 PODXL2Q9NZ53 605 aa11.12□□□□□ -0.63
EIF4A3-206ENST00000575978 SMG6Q86US8 1419 aaKnown RBP11.12□□□□□ -0.63
EIF4A3-206ENST00000575978 FANCIQ9NVI1 1328 aa11.12□□□□□ -0.63
EIF4A3-206ENST00000575978 PNISRQ8TF01 805 aaKnown RBP11.11□□□□□ -0.63
EIF4A3-206ENST00000575978 RNF123Q5XPI4 1314 aa11.11□□□□□ -0.63
EIF4A3-206ENST00000575978 ARHGEF12Q9NZN5 1544 aa11.1□□□□□ -0.63
EIF4A3-206ENST00000575978 ERICH6BQ5W0A0 696 aa11.1□□□□□ -0.63
EIF4A3-206ENST00000575978 ST20-MTHFSA0A0A6YYL1 179 aa11.09□□□□□ -0.63
EIF4A3-206ENST00000575978 ARHGEF5Q12774 1597 aa11.09□□□□□ -0.63
EIF4A3-206ENST00000575978 KIF15Q9NS87 1388 aa11.09□□□□□ -0.63
EIF4A3-206ENST00000575978 PLA2R1Q13018 1463 aa11.09□□□□□ -0.63
EIF4A3-206ENST00000575978 TRPM1Q7Z4N2 1603 aa11.08□□□□□ -0.64
EIF4A3-206ENST00000575978 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
EIF4A3-206ENST00000575978 PREX2Q70Z35 1606 aa11.07□□□□□ -0.64
EIF4A3-206ENST00000575978 LRPPRCP42704 1394 aaKnown RBP11.07□□□□□ -0.64
EIF4A3-206ENST00000575978 SPAG9O60271 1321 aaKnown RBP11.06□□□□□ -0.64
EIF4A3-206ENST00000575978 TTC37Q6PGP7 1564 aa11.06□□□□□ -0.64
EIF4A3-206ENST00000575978 NUDCQ9Y266 331 aa11.06□□□□□ -0.64
EIF4A3-206ENST00000575978 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
EIF4A3-206ENST00000575978 ARID4BQ4LE39 1312 aaPredicted RBP11.05□□□□□ -0.64
EIF4A3-206ENST00000575978 NBPF1Q3BBV0 1214 aa11.05□□□□□ -0.64
EIF4A3-206ENST00000575978 SYCP2Q9BX26 1530 aa11.04□□□□□ -0.64
EIF4A3-206ENST00000575978 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
EIF4A3-206ENST00000575978 MYO5CQ9NQX4 1742 aa11.04□□□□□ -0.64
EIF4A3-206ENST00000575978 ERCC6L2Q5T890 1561 aa11.03□□□□□ -0.64
EIF4A3-206ENST00000575978 KIF3BO15066 747 aa11.03□□□□□ -0.64
EIF4A3-206ENST00000575978 A2MP01023 1474 aa11.03□□□□□ -0.64
EIF4A3-206ENST00000575978 CCDC141Q6ZP82 1450 aa11.03□□□□□ -0.64
EIF4A3-206ENST00000575978 UNC13BO14795 1591 aa11.03□□□□□ -0.64
EIF4A3-206ENST00000575978 CCDC144AA2RUR9 1427 aa11.03□□□□□ -0.64
EIF4A3-206ENST00000575978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.02□□□□□ -0.65
EIF4A3-206ENST00000575978 PER1O15534 1290 aaPredicted RBP11.02□□□□□ -0.65
EIF4A3-206ENST00000575978 CHD1O14646 1710 aa11.01□□□□□ -0.65
EIF4A3-206ENST00000575978 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
EIF4A3-206ENST00000575978 TMF1P82094 1093 aa11.01□□□□□ -0.65
EIF4A3-206ENST00000575978 SENP3Q9H4L4 574 aaPredicted RBP11.01□□□□□ -0.65
EIF4A3-206ENST00000575978 KANK1Q14678 1352 aa11□□□□□ -0.65
EIF4A3-206ENST00000575978 AFAP1Q8N556 730 aa11□□□□□ -0.65
EIF4A3-206ENST00000575978 GGT6Q6P531 493 aa11□□□□□ -0.65
EIF4A3-206ENST00000575978 DISP3Q9P2K9 1392 aa11□□□□□ -0.65
EIF4A3-206ENST00000575978 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
EIF4A3-206ENST00000575978 MAST1Q9Y2H9 1570 aa10.99□□□□□ -0.65
EIF4A3-206ENST00000575978 PARD3Q8TEW0 1356 aa10.99□□□□□ -0.65
EIF4A3-206ENST00000575978 MYBBP1AQ9BQG0 1328 aaKnown RBP10.99□□□□□ -0.65
EIF4A3-206ENST00000575978 TESK2Q96S53 571 aa10.99□□□□□ -0.65
EIF4A3-206ENST00000575978 BRD4O60885 1362 aaPredicted RBP10.99□□□□□ -0.65
EIF4A3-206ENST00000575978 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
EIF4A3-206ENST00000575978 CDCA8Q53HL2 280 aa10.99□□□□□ -0.65
EIF4A3-206ENST00000575978 PRDM15P57071 1507 aaPredicted RBP10.99□□□□□ -0.65
EIF4A3-206ENST00000575978 PLEKHH2Q8IVE3 1493 aa10.99□□□□□ -0.65
EIF4A3-206ENST00000575978 ARHGAP5Q13017 1502 aa10.98□□□□□ -0.65
EIF4A3-206ENST00000575978 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
EIF4A3-206ENST00000575978 IQGAP3Q86VI3 1631 aa10.98□□□□□ -0.65
EIF4A3-206ENST00000575978 GPRASP1Q5JY77 1395 aa10.98□□□□□ -0.65
EIF4A3-206ENST00000575978 SHROOM2Q13796 1616 aa10.97□□□□□ -0.65
EIF4A3-206ENST00000575978 WDR43Q15061 677 aaKnown RBP eCLIP10.97□□□□□ -0.65
EIF4A3-206ENST00000575978 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
EIF4A3-206ENST00000575978 CCDC136Q96JN2 1154 aa10.97□□□□□ -0.65
EIF4A3-206ENST00000575978 COL17A1Q9UMD9 1497 aaPredicted RBP10.97□□□□□ -0.65
EIF4A3-206ENST00000575978 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
EIF4A3-206ENST00000575978 LAMC1P11047 1609 aa10.96□□□□□ -0.65
EIF4A3-206ENST00000575978 PLXNC1O60486 1568 aa10.96□□□□□ -0.66
EIF4A3-206ENST00000575978 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.66
EIF4A3-206ENST00000575978 MAGI2Q86UL8 1455 aa10.95□□□□□ -0.66
EIF4A3-206ENST00000575978 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
EIF4A3-206ENST00000575978 RALBP1Q15311 655 aa10.95□□□□□ -0.66
EIF4A3-206ENST00000575978 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
EIF4A3-206ENST00000575978 EXOC6Q8TAG9 804 aa10.94□□□□□ -0.66
EIF4A3-206ENST00000575978 ESF1Q9H501 851 aaKnown RBP10.93□□□□□ -0.66
EIF4A3-206ENST00000575978 RRP1P56182 461 aaKnown RBP10.93□□□□□ -0.66
EIF4A3-206ENST00000575978 KTN1Q86UP2 1357 aaKnown RBP10.92□□□□□ -0.66
EIF4A3-206ENST00000575978 PLCB2Q00722 1185 aa10.92□□□□□ -0.66
EIF4A3-206ENST00000575978 ATP10AO60312 1499 aa10.91□□□□□ -0.66
EIF4A3-206ENST00000575978 NLRP13Q86W25 1043 aa10.91□□□□□ -0.66
EIF4A3-206ENST00000575978 SKAP1Q86WV1 359 aa10.91□□□□□ -0.66
EIF4A3-206ENST00000575978 ERBINQ96RT1 1412 aa10.91□□□□□ -0.66
EIF4A3-206ENST00000575978 PANK3Q9H999 370 aa10.91□□□□□ -0.66
EIF4A3-206ENST00000575978 ABCC2Q92887 1545 aa10.9□□□□□ -0.66
EIF4A3-206ENST00000575978 BLMP54132 1417 aaPredicted RBP10.9□□□□□ -0.66
EIF4A3-206ENST00000575978 TRAPPC8Q9Y2L5 1435 aa10.9□□□□□ -0.66
EIF4A3-206ENST00000575978 WDR7Q9Y4E6 1490 aa10.9□□□□□ -0.66
EIF4A3-206ENST00000575978 IQGAP1P46940 1657 aa10.9□□□□□ -0.67
EIF4A3-206ENST00000575978 MADDQ8WXG6 1647 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms