RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 TERF2IPQ9NYB0 399 aa12.35□□□□□ -0.43
USP6-205ENST00000574788 SOX12O15370 315 aa12.34□□□□□ -0.43
USP6-205ENST00000574788 ACBD3Q9H3P7 528 aa12.34□□□□□ -0.43
USP6-205ENST00000574788 HSP90AA2PQ14568 343 aaPredicted RBP12.34□□□□□ -0.43
USP6-205ENST00000574788 AK7Q96M32 723 aa12.34□□□□□ -0.43
USP6-205ENST00000574788 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
USP6-205ENST00000574788 FAM184AQ8NB25 1140 aa12.33□□□□□ -0.43
USP6-205ENST00000574788 DCTN1Q14203 1278 aa12.33□□□□□ -0.44
USP6-205ENST00000574788 MYO6Q9UM54 1294 aa12.33□□□□□ -0.44
USP6-205ENST00000574788 RCAN3Q9UKA8 241 aa12.33□□□□□ -0.44
USP6-205ENST00000574788 RSPH6AQ9H0K4 717 aa12.33□□□□□ -0.44
USP6-205ENST00000574788 RUFY1Q96T51 708 aa12.33□□□□□ -0.44
USP6-205ENST00000574788 U2AF1L5P0DN76 240 aaPredicted RBP12.33□□□□□ -0.44
USP6-205ENST00000574788 U2AF1Q01081 240 aaKnown RBP eCLIP12.33□□□□□ -0.44
USP6-205ENST00000574788 ODF2Q5BJF6 829 aa12.32□□□□□ -0.44
USP6-205ENST00000574788 CCAR2Q8N163 923 aaKnown RBP12.32□□□□□ -0.44
USP6-205ENST00000574788 TOMM22Q9NS69 142 aa12.32□□□□□ -0.44
USP6-205ENST00000574788 CCDC43Q96MW1 224 aaKnown RBP12.31□□□□□ -0.44
USP6-205ENST00000574788 SLKQ9H2G2 1235 aaPredicted RBP12.31□□□□□ -0.44
USP6-205ENST00000574788 CCDC173Q0VFZ6 552 aa12.31□□□□□ -0.44
USP6-205ENST00000574788 TRIM29Q14134 588 aa12.31□□□□□ -0.44
USP6-205ENST00000574788 ZRSR2Q15696 482 aaKnown RBP12.3□□□□□ -0.44
USP6-205ENST00000574788 SMC4Q9NTJ3 1288 aa12.3□□□□□ -0.44
USP6-205ENST00000574788 WWC1Q8IX03 1113 aa12.3□□□□□ -0.44
USP6-205ENST00000574788 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
USP6-205ENST00000574788 CT47A1Q5JQC4 288 aaPredicted RBP12.29□□□□□ -0.44
USP6-205ENST00000574788 ROCK2O75116 1388 aaKnown RBP12.29□□□□□ -0.44
USP6-205ENST00000574788 RUFY2Q8WXA3 655 aa12.29□□□□□ -0.44
USP6-205ENST00000574788 R3HCC1Q9Y3T6 440 aaKnown RBP12.29□□□□□ -0.44
USP6-205ENST00000574788 ARID3AQ99856 593 aa12.29□□□□□ -0.44
USP6-205ENST00000574788 EID1Q9Y6B2 187 aa12.28□□□□□ -0.44
USP6-205ENST00000574788 ARGLU1Q9NWB6 273 aaPredicted RBP12.28□□□□□ -0.44
USP6-205ENST00000574788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.27□□□□□ -0.44
USP6-205ENST00000574788 CCDC9Q9Y3X0 531 aaKnown RBP12.27□□□□□ -0.45
USP6-205ENST00000574788 HSP90B2PQ58FF3 399 aa12.27□□□□□ -0.45
USP6-205ENST00000574788 PCMTD1Q96MG8 357 aaPredicted RBP12.27□□□□□ -0.45
USP6-205ENST00000574788 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.45
USP6-205ENST00000574788 MFAP1P55081 439 aaKnown RBP12.27□□□□□ -0.45
USP6-205ENST00000574788 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
USP6-205ENST00000574788 TRHP20396 242 aaPredicted RBP12.26□□□□□ -0.45
USP6-205ENST00000574788 REC8O95072 547 aa12.26□□□□□ -0.45
USP6-205ENST00000574788 PDE3BQ13370 1112 aa12.26□□□□□ -0.45
USP6-205ENST00000574788 ZKSCAN1P17029 563 aaPredicted RBP12.25□□□□□ -0.45
USP6-205ENST00000574788 NEXNQ0ZGT2 675 aa12.25□□□□□ -0.45
USP6-205ENST00000574788 PATL2C9JE40 543 aaKnown RBP12.25□□□□□ -0.45
USP6-205ENST00000574788 ZNF771Q7L3S4 317 aaPredicted RBP12.24□□□□□ -0.45
USP6-205ENST00000574788 TRDNQ13061 729 aa12.24□□□□□ -0.45
USP6-205ENST00000574788 RNF20Q5VTR2 975 aa12.24□□□□□ -0.45
USP6-205ENST00000574788 CWC15Q9P013 229 aaKnown RBP12.24□□□□□ -0.45
USP6-205ENST00000574788 IPO9Q96P70 1041 aaKnown RBP12.24□□□□□ -0.45
USP6-205ENST00000574788 ROCK1Q13464 1354 aa12.23□□□□□ -0.45
USP6-205ENST00000574788 CENPJQ9HC77 1338 aaPredicted RBP12.23□□□□□ -0.45
USP6-205ENST00000574788 MAP7D2Q96T17 732 aa12.23□□□□□ -0.45
USP6-205ENST00000574788 WRNQ14191 1432 aaPredicted RBP eCLIP12.23□□□□□ -0.45
USP6-205ENST00000574788 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
USP6-205ENST00000574788 EPS15P42566 896 aa12.23□□□□□ -0.45
USP6-205ENST00000574788 HOMER1Q86YM7 354 aa12.23□□□□□ -0.45
USP6-205ENST00000574788 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
USP6-205ENST00000574788 SLC4A10Q6U841 1118 aa12.23□□□□□ -0.45
USP6-205ENST00000574788 NAT10Q9H0A0 1025 aaKnown RBP12.23□□□□□ -0.45
USP6-205ENST00000574788 AMPHP49418 695 aa12.23□□□□□ -0.45
USP6-205ENST00000574788 RBM19Q9Y4C8 960 aaKnown RBP12.23□□□□□ -0.45
USP6-205ENST00000574788 CPLX1O14810 134 aa12.22□□□□□ -0.45
USP6-205ENST00000574788 MTERF4Q7Z6M4 381 aaKnown RBP12.22□□□□□ -0.45
USP6-205ENST00000574788 EIF4G1Q04637 1599 aaKnown RBP12.22□□□□□ -0.45
USP6-205ENST00000574788 CWC22Q9HCG8 908 aaKnown RBP12.22□□□□□ -0.45
USP6-205ENST00000574788 ERICH2A1L162 156 aa12.22□□□□□ -0.45
USP6-205ENST00000574788 VPS37DQ86XT2 251 aa12.22□□□□□ -0.45
USP6-205ENST00000574788 ERCC4Q92889 916 aaPredicted RBP12.22□□□□□ -0.45
USP6-205ENST00000574788 CARMIL2Q6F5E8 1435 aa12.22□□□□□ -0.45
USP6-205ENST00000574788 SAFB2Q14151 953 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP6-205ENST00000574788 DIAPH3Q9NSV4 1193 aa12.21□□□□□ -0.45
USP6-205ENST00000574788 STK26Q9P289 416 aa12.21□□□□□ -0.45
USP6-205ENST00000574788 TNIKQ9UKE5 1360 aa12.21□□□□□ -0.45
USP6-205ENST00000574788 SAFBQ15424 915 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP6-205ENST00000574788 WWC2Q6AWC2 1192 aa12.21□□□□□ -0.45
USP6-205ENST00000574788 MCTP1Q6DN14 999 aa12.21□□□□□ -0.45
USP6-205ENST00000574788 CAGE1Q8TC20 777 aa12.21□□□□□ -0.46
USP6-205ENST00000574788 DDX49Q9Y6V7 483 aaKnown RBP12.2□□□□□ -0.46
USP6-205ENST00000574788 NGDNQ8NEJ9 315 aaKnown RBP12.2□□□□□ -0.46
USP6-205ENST00000574788 MLECQ14165 292 aa12.19□□□□□ -0.46
USP6-205ENST00000574788 UACAQ9BZF9 1416 aa12.19□□□□□ -0.46
USP6-205ENST00000574788 C1orf141Q5JVX7 400 aa12.19□□□□□ -0.46
USP6-205ENST00000574788 BRMS1Q9HCU9 246 aa12.19□□□□□ -0.46
USP6-205ENST00000574788 ANKRD18AQ8IVF6 992 aa12.18□□□□□ -0.46
USP6-205ENST00000574788 CGNL1Q0VF96 1302 aa12.18□□□□□ -0.46
USP6-205ENST00000574788 SETD5Q9C0A6 1442 aa12.18□□□□□ -0.46
USP6-205ENST00000574788 OFD1O75665 1012 aa12.18□□□□□ -0.46
USP6-205ENST00000574788 XBP1P17861 261 aa12.18□□□□□ -0.46
USP6-205ENST00000574788 DHX8Q14562 1220 aaKnown RBP12.18□□□□□ -0.46
USP6-205ENST00000574788 NAP1L1P55209 391 aaKnown RBP12.17□□□□□ -0.46
USP6-205ENST00000574788 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.17□□□□□ -0.46
USP6-205ENST00000574788 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
USP6-205ENST00000574788 HSP90AB2PQ58FF8 381 aa12.17□□□□□ -0.46
USP6-205ENST00000574788 NLRP13Q86W25 1043 aa12.17□□□□□ -0.46
USP6-205ENST00000574788 DCAF8L1A6NGE4 600 aa12.16□□□□□ -0.46
USP6-205ENST00000574788 CENPQQ7L2Z9 268 aaPredicted RBP12.16□□□□□ -0.46
USP6-205ENST00000574788 NGEFQ8N5V2 710 aa12.16□□□□□ -0.46
USP6-205ENST00000574788 H0YHG0 523 aa12.16□□□□□ -0.46
USP6-205ENST00000574788 ZNF592Q92610 1267 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms