RNA–Protein interactions for RNA: ENST00000573674.1

SLC52A1-204, Transcript of solute carrier family 52 member 1, humanhuman

TSL 2

Gene SLC52A1, Length 2,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-204ENST00000573674 MBD5Q9P267 1494 aa19.7■□□□□ 0.74
SLC52A1-204ENST00000573674 LAS1LQ9Y4W2 734 aaKnown RBP19.69■□□□□ 0.74
SLC52A1-204ENST00000573674 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
SLC52A1-204ENST00000573674 SAMD9LQ8IVG5 1584 aa19.69■□□□□ 0.74
SLC52A1-204ENST00000573674 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
SLC52A1-204ENST00000573674 RPRD2Q5VT52 1461 aaKnown RBP19.69■□□□□ 0.74
SLC52A1-204ENST00000573674 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.74
SLC52A1-204ENST00000573674 SHANK2Q9UPX8 1470 aa19.68■□□□□ 0.74
SLC52A1-204ENST00000573674 NPM2Q86SE8 214 aaKnown RBP19.68■□□□□ 0.74
SLC52A1-204ENST00000573674 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.68■□□□□ 0.74
SLC52A1-204ENST00000573674 PREX2Q70Z35 1606 aa19.68■□□□□ 0.74
SLC52A1-204ENST00000573674 PDE4AP27815 886 aa19.67■□□□□ 0.74
SLC52A1-204ENST00000573674 PKD2Q13563 968 aa19.66■□□□□ 0.74
SLC52A1-204ENST00000573674 BACH2Q9BYV9 841 aa19.65■□□□□ 0.74
SLC52A1-204ENST00000573674 KIF15Q9NS87 1388 aa19.65■□□□□ 0.74
SLC52A1-204ENST00000573674 MS4A1P11836 297 aa19.64■□□□□ 0.74
SLC52A1-204ENST00000573674 ARHGAP5Q13017 1502 aa19.64■□□□□ 0.73
SLC52A1-204ENST00000573674 ARHGEF5Q12774 1597 aa19.64■□□□□ 0.73
SLC52A1-204ENST00000573674 NUP155O75694 1391 aa19.63■□□□□ 0.73
SLC52A1-204ENST00000573674 PNISRQ8TF01 805 aaKnown RBP19.63■□□□□ 0.73
SLC52A1-204ENST00000573674 CCDC141Q6ZP82 1450 aa19.62■□□□□ 0.73
SLC52A1-204ENST00000573674 ZCCHC11Q5TAX3 1644 aaKnown RBP19.62■□□□□ 0.73
SLC52A1-204ENST00000573674 SYCP2Q9BX26 1530 aa19.62■□□□□ 0.73
SLC52A1-204ENST00000573674 KIAA1107Q9UPP5 1409 aa19.61■□□□□ 0.73
SLC52A1-204ENST00000573674 RRP1P56182 461 aaKnown RBP19.61■□□□□ 0.73
SLC52A1-204ENST00000573674 EXOC6Q8TAG9 804 aa19.59■□□□□ 0.73
SLC52A1-204ENST00000573674 UHRF1BP1LA0JNW5 1464 aa19.58■□□□□ 0.73
SLC52A1-204ENST00000573674 LRPPRCP42704 1394 aaKnown RBP19.57■□□□□ 0.72
SLC52A1-204ENST00000573674 RSPH4AQ5TD94 716 aa19.57■□□□□ 0.72
SLC52A1-204ENST00000573674 BCORL1Q5H9F3 1711 aa19.56■□□□□ 0.72
SLC52A1-204ENST00000573674 BRPF3Q9ULD4 1205 aa19.56■□□□□ 0.72
SLC52A1-204ENST00000573674 MYO5CQ9NQX4 1742 aa19.56■□□□□ 0.72
SLC52A1-204ENST00000573674 GSE1Q14687 1217 aa19.56■□□□□ 0.72
SLC52A1-204ENST00000573674 ARID4BQ4LE39 1312 aaPredicted RBP19.55■□□□□ 0.72
SLC52A1-204ENST00000573674 ARHGEF12Q9NZN5 1544 aa19.54■□□□□ 0.72
SLC52A1-204ENST00000573674 DDRGK1Q96HY6 314 aa19.54■□□□□ 0.72
SLC52A1-204ENST00000573674 TMC1Q8TDI8 760 aa19.53■□□□□ 0.72
SLC52A1-204ENST00000573674 PLCH2O75038 1416 aa19.52■□□□□ 0.72
SLC52A1-204ENST00000573674 SENP3-EIF4A1A0A087X0R7 540 aa19.52■□□□□ 0.72
SLC52A1-204ENST00000573674 CNGB1Q14028 1251 aaPredicted RBP19.51■□□□□ 0.71
SLC52A1-204ENST00000573674 RCAN3Q9UKA8 241 aa19.51■□□□□ 0.71
SLC52A1-204ENST00000573674 USP47Q96K76 1375 aa19.5■□□□□ 0.71
SLC52A1-204ENST00000573674 ZNF326Q5BKZ1 582 aaKnown RBP19.5■□□□□ 0.71
SLC52A1-204ENST00000573674 KDM5DQ9BY66 1539 aa19.5■□□□□ 0.71
SLC52A1-204ENST00000573674 EFCAB2Q5VUJ9 269 aa19.49■□□□□ 0.71
SLC52A1-204ENST00000573674 ROCK2O75116 1388 aaKnown RBP19.49■□□□□ 0.71
SLC52A1-204ENST00000573674 BRD4O60885 1362 aaPredicted RBP19.48■□□□□ 0.71
SLC52A1-204ENST00000573674 NFKBIBQ15653 356 aa19.48■□□□□ 0.71
SLC52A1-204ENST00000573674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.48■□□□□ 0.71
SLC52A1-204ENST00000573674 KDM5CP41229 1560 aa19.47■□□□□ 0.71
SLC52A1-204ENST00000573674 PLEKHH2Q8IVE3 1493 aa19.47■□□□□ 0.71
SLC52A1-204ENST00000573674 MAST1Q9Y2H9 1570 aa19.47■□□□□ 0.71
SLC52A1-204ENST00000573674 FAM135AQ9P2D6 1515 aa19.45■□□□□ 0.7
SLC52A1-204ENST00000573674 POLR3GLQ9BT43 218 aa19.45■□□□□ 0.7
SLC52A1-204ENST00000573674 TRAPPC8Q9Y2L5 1435 aa19.45■□□□□ 0.7
SLC52A1-204ENST00000573674 KTN1Q86UP2 1357 aaKnown RBP19.44■□□□□ 0.7
SLC52A1-204ENST00000573674 PDE3BQ13370 1112 aa19.44■□□□□ 0.7
SLC52A1-204ENST00000573674 FRAT1Q92837 279 aaPredicted RBP19.44■□□□□ 0.7
SLC52A1-204ENST00000573674 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
SLC52A1-204ENST00000573674 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
SLC52A1-204ENST00000573674 AFAP1Q8N556 730 aa19.42■□□□□ 0.7
SLC52A1-204ENST00000573674 ABCC1P33527 1531 aa19.42■□□□□ 0.7
SLC52A1-204ENST00000573674 WDR7Q9Y4E6 1490 aa19.42■□□□□ 0.7
SLC52A1-204ENST00000573674 PLXNC1O60486 1568 aa19.4■□□□□ 0.7
SLC52A1-204ENST00000573674 RALBP1Q15311 655 aa19.4■□□□□ 0.7
SLC52A1-204ENST00000573674 KDM2AQ9Y2K7 1162 aa19.4■□□□□ 0.7
SLC52A1-204ENST00000573674 UNC13BO14795 1591 aa19.37■□□□□ 0.69
SLC52A1-204ENST00000573674 DUOX2Q9NRD8 1548 aa19.37■□□□□ 0.69
SLC52A1-204ENST00000573674 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
SLC52A1-204ENST00000573674 EIF5BO60841 1220 aaKnown RBP19.36■□□□□ 0.69
SLC52A1-204ENST00000573674 ASXL2Q76L83 1435 aa19.35■□□□□ 0.69
SLC52A1-204ENST00000573674 SPAG9O60271 1321 aaKnown RBP19.35■□□□□ 0.69
SLC52A1-204ENST00000573674 RSPH6AQ9H0K4 717 aa19.35■□□□□ 0.69
SLC52A1-204ENST00000573674 PLA2R1Q13018 1463 aa19.34■□□□□ 0.69
SLC52A1-204ENST00000573674 UHRF1BP1Q6BDS2 1440 aa19.34■□□□□ 0.69
SLC52A1-204ENST00000573674 RALGAPBQ86X10 1494 aa19.34■□□□□ 0.69
SLC52A1-204ENST00000573674 FAM43AQ8N2R8 423 aa19.34■□□□□ 0.69
SLC52A1-204ENST00000573674 E9PCH4 1651 aa19.34■□□□□ 0.69
SLC52A1-204ENST00000573674 FANCAO15360 1455 aa19.33■□□□□ 0.69
SLC52A1-204ENST00000573674 SKAP1Q86WV1 359 aa19.33■□□□□ 0.68
SLC52A1-204ENST00000573674 ERBINQ96RT1 1412 aa19.33■□□□□ 0.68
SLC52A1-204ENST00000573674 SLC4A3P48751 1232 aa19.32■□□□□ 0.68
SLC52A1-204ENST00000573674 RGL3Q3MIN7 710 aa19.32■□□□□ 0.68
SLC52A1-204ENST00000573674 CCDC144AA2RUR9 1427 aa19.32■□□□□ 0.68
SLC52A1-204ENST00000573674 CRBNQ96SW2 442 aa19.32■□□□□ 0.68
SLC52A1-204ENST00000573674 DAXXQ9UER7 740 aaPredicted RBP19.32■□□□□ 0.68
SLC52A1-204ENST00000573674 ARAP3Q8WWN8 1544 aa19.32■□□□□ 0.68
SLC52A1-204ENST00000573674 IQGAP3Q86VI3 1631 aa19.3■□□□□ 0.68
SLC52A1-204ENST00000573674 PLIN1O60240 522 aa19.3■□□□□ 0.68
SLC52A1-204ENST00000573674 NLRP13Q86W25 1043 aa19.3■□□□□ 0.68
SLC52A1-204ENST00000573674 CDCA7LQ96GN5 454 aa19.3■□□□□ 0.68
SLC52A1-204ENST00000573674 ABCA9Q8IUA7 1624 aa19.3■□□□□ 0.68
SLC52A1-204ENST00000573674 KDM2BQ8NHM5 1336 aa19.29■□□□□ 0.68
SLC52A1-204ENST00000573674 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
SLC52A1-204ENST00000573674 ZFYVE16Q7Z3T8 1539 aa19.29■□□□□ 0.68
SLC52A1-204ENST00000573674 MAGI2Q86UL8 1455 aa19.28■□□□□ 0.68
SLC52A1-204ENST00000573674 PARD3Q8TEW0 1356 aa19.27■□□□□ 0.68
SLC52A1-204ENST00000573674 INSRP06213 1382 aa19.27■□□□□ 0.68
SLC52A1-204ENST00000573674 NPM1P06748 294 aaKnown RBP eCLIP19.27■□□□□ 0.67
SLC52A1-204ENST00000573674 PKNOX2Q96KN3 472 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms