RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 AMER1Q5JTC6 1135 aaPredicted RBP7.53□□□□□ -1.2
RPA1-204ENST00000571725 KIAA1468Q9P260 1216 aa7.53□□□□□ -1.2
RPA1-204ENST00000571725 EVI5O60447 810 aa7.52□□□□□ -1.21
RPA1-204ENST00000571725 SEPT9Q9UHD8 586 aaPredicted RBP7.52□□□□□ -1.21
RPA1-204ENST00000571725 PPP1R18Q6NYC8 613 aa7.51□□□□□ -1.21
RPA1-204ENST00000571725 ANO8Q9HCE9 1232 aaPredicted RBP7.5□□□□□ -1.21
RPA1-204ENST00000571725 ECM2O94769 699 aaPredicted RBP7.49□□□□□ -1.21
RPA1-204ENST00000571725 PPP4CP60510 307 aa7.49□□□□□ -1.21
RPA1-204ENST00000571725 PKDCCQ504Y2 493 aa7.49□□□□□ -1.21
RPA1-204ENST00000571725 COL9A1P20849 921 aa7.48□□□□□ -1.21
RPA1-204ENST00000571725 FAM98CQ17RN3 349 aaKnown RBP7.48□□□□□ -1.21
RPA1-204ENST00000571725 PPP1R15BQ5SWA1 713 aa7.48□□□□□ -1.21
RPA1-204ENST00000571725 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.48□□□□□ -1.21
RPA1-204ENST00000571725 TREML4Q6UXN2 200 aa7.47□□□□□ -1.21
RPA1-204ENST00000571725 MAP3K9P80192 1104 aa7.46□□□□□ -1.22
RPA1-204ENST00000571725 GGCXP38435 758 aa7.45□□□□□ -1.22
RPA1-204ENST00000571725 IL21Q9HBE4 155 aa7.45□□□□□ -1.22
RPA1-204ENST00000571725 ONECUT3O60422 494 aaPredicted RBP7.44□□□□□ -1.22
RPA1-204ENST00000571725 TJAP1Q5JTD0 557 aa7.44□□□□□ -1.22
RPA1-204ENST00000571725 FBXW7Q969H0 707 aa7.44□□□□□ -1.22
RPA1-204ENST00000571725 STK17AQ9UEE5 414 aa7.43□□□□□ -1.22
RPA1-204ENST00000571725 TYW1BQ6NUM6 668 aa7.42□□□□□ -1.22
RPA1-204ENST00000571725 MTRQ99707 1265 aa7.42□□□□□ -1.22
RPA1-204ENST00000571725 PCDHGA10Q9Y5H3 936 aa7.42□□□□□ -1.22
RPA1-204ENST00000571725 POTECB2RU33 542 aa7.41□□□□□ -1.22
RPA1-204ENST00000571725 MYT1Q01538 1121 aa7.41□□□□□ -1.22
RPA1-204ENST00000571725 DGAT1O75907 488 aa7.4□□□□□ -1.22
RPA1-204ENST00000571725 TRIM6-TRIM34B2RNG4 842 aa7.39□□□□□ -1.23
RPA1-204ENST00000571725 RTN4Q9NQC3 1192 aaKnown RBP7.38□□□□□ -1.23
RPA1-204ENST00000571725 RGL2O15211 777 aa7.37□□□□□ -1.23
RPA1-204ENST00000571725 PDE4AP27815 886 aa7.37□□□□□ -1.23
RPA1-204ENST00000571725 INSM1Q01101 510 aaPredicted RBP7.37□□□□□ -1.23
RPA1-204ENST00000571725 CRISPLD2Q9H0B8 497 aa7.37□□□□□ -1.23
RPA1-204ENST00000571725 PHF14O94880 888 aa7.36□□□□□ -1.23
RPA1-204ENST00000571725 PACS2Q86VP3 889 aa7.36□□□□□ -1.23
RPA1-204ENST00000571725 ZNF516Q92618 1163 aa7.36□□□□□ -1.23
RPA1-204ENST00000571725 FAM187AA6NFU0 413 aa7.35□□□□□ -1.23
RPA1-204ENST00000571725 WFS1O76024 890 aa7.35□□□□□ -1.23
RPA1-204ENST00000571725 C6orf132Q5T0Z8 1188 aa7.35□□□□□ -1.23
RPA1-204ENST00000571725 RNF40O75150 1001 aa7.34□□□□□ -1.23
RPA1-204ENST00000571725 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
RPA1-204ENST00000571725 SAMD7Q7Z3H4 446 aa7.33□□□□□ -1.24
RPA1-204ENST00000571725 LOC100996750A0A140TA64 210 aa7.32□□□□□ -1.24
RPA1-204ENST00000571725 NKX2-3Q8TAU0 364 aa7.32□□□□□ -1.24
RPA1-204ENST00000571725 TMUB1Q9BVT8 246 aa7.32□□□□□ -1.24
RPA1-204ENST00000571725 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
RPA1-204ENST00000571725 SLC19A1P41440 591 aa7.31□□□□□ -1.24
RPA1-204ENST00000571725 HDGFP51858 240 aaKnown RBP7.31□□□□□ -1.24
RPA1-204ENST00000571725 EPAS1Q99814 870 aa7.31□□□□□ -1.24
RPA1-204ENST00000571725 TRIM67Q6ZTA4 783 aa7.3□□□□□ -1.24
RPA1-204ENST00000571725 RBM33Q96EV2 1170 aaKnown RBP7.3□□□□□ -1.24
RPA1-204ENST00000571725 DDX27Q96GQ7 796 aaKnown RBP7.3□□□□□ -1.24
RPA1-204ENST00000571725 LARP6Q9BRS8 491 aaKnown RBP7.29□□□□□ -1.24
RPA1-204ENST00000571725 RYDENQ9NUL5 291 aaKnown RBP7.29□□□□□ -1.24
RPA1-204ENST00000571725 COPS2P61201 443 aa7.28□□□□□ -1.24
RPA1-204ENST00000571725 ST8SIA5O15466 376 aa7.27□□□□□ -1.25
RPA1-204ENST00000571725 PRR20EP86478 221 aa7.27□□□□□ -1.25
RPA1-204ENST00000571725 PRR20CP86479 221 aa7.27□□□□□ -1.25
RPA1-204ENST00000571725 PRR20DP86480 221 aa7.27□□□□□ -1.25
RPA1-204ENST00000571725 PRR20BP86481 221 aa7.27□□□□□ -1.25
RPA1-204ENST00000571725 PRR20AP86496 221 aa7.27□□□□□ -1.25
RPA1-204ENST00000571725 NCKAP5LQ9HCH0 1330 aa7.27□□□□□ -1.25
RPA1-204ENST00000571725 ZNF598Q86UK7 904 aaKnown RBP7.26□□□□□ -1.25
RPA1-204ENST00000571725 FAM181BA6NEQ2 426 aa7.25□□□□□ -1.25
RPA1-204ENST00000571725 SMAPO00193 183 aa7.25□□□□□ -1.25
RPA1-204ENST00000571725 TNFRSF10AO00220 468 aa7.25□□□□□ -1.25
RPA1-204ENST00000571725 SPRYD7Q5W111 196 aa7.25□□□□□ -1.25
RPA1-204ENST00000571725 NECTIN2Q92692 538 aa7.25□□□□□ -1.25
RPA1-204ENST00000571725 AAASQ9NRG9 546 aa7.25□□□□□ -1.25
RPA1-204ENST00000571725 C11orf95C9JLR9 678 aaPredicted RBP7.24□□□□□ -1.25
RPA1-204ENST00000571725 WIPF1O43516 503 aa7.24□□□□□ -1.25
RPA1-204ENST00000571725 ZNF697Q5TEC3 545 aa7.24□□□□□ -1.25
RPA1-204ENST00000571725 TSKSQ9UJT2 592 aa7.24□□□□□ -1.25
RPA1-204ENST00000571725 SLC24A1O60721 1099 aa7.23□□□□□ -1.25
RPA1-204ENST00000571725 APLP1P51693 650 aa7.23□□□□□ -1.25
RPA1-204ENST00000571725 HS6ST3Q8IZP7 471 aa7.23□□□□□ -1.25
RPA1-204ENST00000571725 EMILIN3Q9NT22 766 aa7.23□□□□□ -1.25
RPA1-204ENST00000571725 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
RPA1-204ENST00000571725 ZPR1O75312 459 aa7.2□□□□□ -1.26
RPA1-204ENST00000571725 PKD2Q13563 968 aa7.2□□□□□ -1.26
RPA1-204ENST00000571725 NBPF26B4DH59 902 aa7.19□□□□□ -1.26
RPA1-204ENST00000571725 MAP3K7O43318 606 aa7.19□□□□□ -1.26
RPA1-204ENST00000571725 NFX1Q12986 1120 aaKnown RBP7.19□□□□□ -1.26
RPA1-204ENST00000571725 PNMA3Q9UL41 463 aa7.19□□□□□ -1.26
RPA1-204ENST00000571725 CHGAP10645 457 aaKnown RBP7.18□□□□□ -1.26
RPA1-204ENST00000571725 SLC4A3P48751 1232 aa7.18□□□□□ -1.26
RPA1-204ENST00000571725 DDX12PQ92771 950 aa7.17□□□□□ -1.26
RPA1-204ENST00000571725 CDCA7LQ96GN5 454 aa7.17□□□□□ -1.26
RPA1-204ENST00000571725 GMPR2Q9P2T1 348 aaKnown RBP7.17□□□□□ -1.26
RPA1-204ENST00000571725 GDF9O60383 454 aa7.16□□□□□ -1.26
RPA1-204ENST00000571725 ANKLE1Q8NAG6 615 aa7.16□□□□□ -1.26
RPA1-204ENST00000571725 TATDN2Q93075 761 aa7.16□□□□□ -1.26
RPA1-204ENST00000571725 AXIN1O15169 862 aa7.15□□□□□ -1.26
RPA1-204ENST00000571725 PRSS12P56730 875 aa7.15□□□□□ -1.26
RPA1-204ENST00000571725 NBR1Q14596 966 aa7.15□□□□□ -1.26
RPA1-204ENST00000571725 SUZ12Q15022 739 aaKnown RBP7.15□□□□□ -1.26
RPA1-204ENST00000571725 FOXC1Q12948 553 aa7.14□□□□□ -1.27
RPA1-204ENST00000571725 MFSD10Q14728 455 aa7.14□□□□□ -1.27
RPA1-204ENST00000571725 TSR1Q2NL82 804 aaKnown RBP7.14□□□□□ -1.27
RPA1-204ENST00000571725 SLF2Q8IX21 1173 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms