RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 THSD4Q6ZMP0 1018 aa8.29□□□□□ -1.08
UBR1-211ENST00000569971 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
UBR1-211ENST00000569971 FBXW7Q969H0 707 aa8.29□□□□□ -1.08
UBR1-211ENST00000569971 ADAM33Q9BZ11 813 aa8.27□□□□□ -1.09
UBR1-211ENST00000569971 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
UBR1-211ENST00000569971 PHF14O94880 888 aa8.26□□□□□ -1.09
UBR1-211ENST00000569971 PRKCSHP14314 528 aaPredicted RBP8.26□□□□□ -1.09
UBR1-211ENST00000569971 CAMK2BQ13554 666 aa8.25□□□□□ -1.09
UBR1-211ENST00000569971 WNT2BQ93097 391 aa8.25□□□□□ -1.09
UBR1-211ENST00000569971 EMILIN3Q9NT22 766 aa8.25□□□□□ -1.09
UBR1-211ENST00000569971 RABGEF1Q9UJ41 708 aa8.25□□□□□ -1.09
UBR1-211ENST00000569971 ONECUT3O60422 494 aaPredicted RBP8.24□□□□□ -1.09
UBR1-211ENST00000569971 TYW1BQ6NUM6 668 aa8.24□□□□□ -1.09
UBR1-211ENST00000569971 PCDHGA10Q9Y5H3 936 aa8.24□□□□□ -1.09
UBR1-211ENST00000569971 PTPN5P54829 565 aa8.23□□□□□ -1.09
UBR1-211ENST00000569971 LAPTM4BQ86VI4 370 aa8.23□□□□□ -1.09
UBR1-211ENST00000569971 NYAP1Q6ZVC0 841 aa8.22□□□□□ -1.09
UBR1-211ENST00000569971 EPAS1Q99814 870 aa8.22□□□□□ -1.09
UBR1-211ENST00000569971 A0A0G2JS52 829 aa8.19□□□□□ -1.1
UBR1-211ENST00000569971 ANKK1Q8NFD2 765 aa8.19□□□□□ -1.1
UBR1-211ENST00000569971 ITGBL1O95965 494 aaPredicted RBP8.17□□□□□ -1.1
UBR1-211ENST00000569971 CADPS2Q86UW7 1296 aa8.17□□□□□ -1.1
UBR1-211ENST00000569971 COL9A1P20849 921 aa8.15□□□□□ -1.1
UBR1-211ENST00000569971 SOWAHBA6NEL2 793 aa8.14□□□□□ -1.11
UBR1-211ENST00000569971 PROX2Q3B8N5 592 aa8.14□□□□□ -1.11
UBR1-211ENST00000569971 C6orf132Q5T0Z8 1188 aa8.14□□□□□ -1.11
UBR1-211ENST00000569971 TPRNQ4KMQ1 711 aa8.13□□□□□ -1.11
UBR1-211ENST00000569971 TRIM6-TRIM34B2RNG4 842 aa8.12□□□□□ -1.11
UBR1-211ENST00000569971 DPYSL4O14531 572 aa8.12□□□□□ -1.11
UBR1-211ENST00000569971 PDIA6Q15084 440 aa8.12□□□□□ -1.11
UBR1-211ENST00000569971 ZFRQ96KR1 1074 aaKnown RBP8.12□□□□□ -1.11
UBR1-211ENST00000569971 SPDYE16A6NNV3 312 aaPredicted RBP8.11□□□□□ -1.11
UBR1-211ENST00000569971 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
UBR1-211ENST00000569971 KIAA1468Q9P260 1216 aa8.11□□□□□ -1.11
UBR1-211ENST00000569971 EN1Q05925 392 aaPredicted RBP8.09□□□□□ -1.11
UBR1-211ENST00000569971 ARIH1Q9Y4X5 557 aaPredicted RBP8.09□□□□□ -1.11
UBR1-211ENST00000569971 IRX2Q9BZI1 471 aaPredicted RBP8.08□□□□□ -1.12
UBR1-211ENST00000569971 BCAMP50895 628 aa8.07□□□□□ -1.12
UBR1-211ENST00000569971 CERKQ8TCT0 537 aa8.07□□□□□ -1.12
UBR1-211ENST00000569971 TSR3Q9UJK0 312 aaKnown RBP8.06□□□□□ -1.12
UBR1-211ENST00000569971 PACS2Q86VP3 889 aa8.05□□□□□ -1.12
UBR1-211ENST00000569971 LRCH3Q96II8 777 aa8.05□□□□□ -1.12
UBR1-211ENST00000569971 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.05□□□□□ -1.12
UBR1-211ENST00000569971 KCNC4Q03721 635 aa8.04□□□□□ -1.12
UBR1-211ENST00000569971 NBR1Q14596 966 aa8.04□□□□□ -1.12
UBR1-211ENST00000569971 DDX12PQ92771 950 aa8.04□□□□□ -1.12
UBR1-211ENST00000569971 MAP3K7O43318 606 aa8.03□□□□□ -1.12
UBR1-211ENST00000569971 WBP1LQ9NX94 342 aa8.03□□□□□ -1.12
UBR1-211ENST00000569971 SEPT9Q9UHD8 586 aaPredicted RBP8.03□□□□□ -1.12
UBR1-211ENST00000569971 RBM33Q96EV2 1170 aaKnown RBP8.02□□□□□ -1.13
UBR1-211ENST00000569971 RBM27Q9P2N5 1060 aaKnown RBP8.02□□□□□ -1.13
UBR1-211ENST00000569971 E2F4Q16254 413 aa8.01□□□□□ -1.13
UBR1-211ENST00000569971 TSKSQ9UJT2 592 aa8□□□□□ -1.13
UBR1-211ENST00000569971 HPS5Q9UPZ3 1129 aa8□□□□□ -1.13
UBR1-211ENST00000569971 NBPF26B4DH59 902 aa7.98□□□□□ -1.13
UBR1-211ENST00000569971 PRSS12P56730 875 aa7.98□□□□□ -1.13
UBR1-211ENST00000569971 TSR1Q2NL82 804 aaKnown RBP7.98□□□□□ -1.13
UBR1-211ENST00000569971 NECTIN2Q92692 538 aa7.98□□□□□ -1.13
UBR1-211ENST00000569971 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
UBR1-211ENST00000569971 LAPTM4AQ15012 233 aa7.97□□□□□ -1.13
UBR1-211ENST00000569971 WDR70Q9NW82 654 aa7.97□□□□□ -1.13
UBR1-211ENST00000569971 PPP4CP60510 307 aa7.95□□□□□ -1.14
UBR1-211ENST00000569971 SAMD7Q7Z3H4 446 aa7.92□□□□□ -1.14
UBR1-211ENST00000569971 TATDN2Q93075 761 aa7.92□□□□□ -1.14
UBR1-211ENST00000569971 OSBPP22059 807 aa7.91□□□□□ -1.14
UBR1-211ENST00000569971 HDGFP51858 240 aaKnown RBP7.91□□□□□ -1.14
UBR1-211ENST00000569971 TJAP1Q5JTD0 557 aa7.91□□□□□ -1.14
UBR1-211ENST00000569971 IL21Q9HBE4 155 aa7.91□□□□□ -1.14
UBR1-211ENST00000569971 TTC13Q8NBP0 860 aa7.9□□□□□ -1.14
UBR1-211ENST00000569971 FAM198AQ9UFP1 575 aa7.9□□□□□ -1.14
UBR1-211ENST00000569971 PNMA3Q9UL41 463 aa7.9□□□□□ -1.14
UBR1-211ENST00000569971 GRXCR2A6NFK2 248 aa7.89□□□□□ -1.15
UBR1-211ENST00000569971 PRIM1P49642 420 aaKnown RBP7.88□□□□□ -1.15
UBR1-211ENST00000569971 V9GY48 417 aaPredicted RBP7.88□□□□□ -1.15
UBR1-211ENST00000569971 SLC4A3P48751 1232 aa7.87□□□□□ -1.15
UBR1-211ENST00000569971 Q6ZNB5 142 aa7.87□□□□□ -1.15
UBR1-211ENST00000569971 MTRQ99707 1265 aa7.87□□□□□ -1.15
UBR1-211ENST00000569971 SMAPO00193 183 aa7.86□□□□□ -1.15
UBR1-211ENST00000569971 NUDT18Q6ZVK8 323 aa7.86□□□□□ -1.15
UBR1-211ENST00000569971 SLF2Q8IX21 1173 aa7.86□□□□□ -1.15
UBR1-211ENST00000569971 PRR14Q9BWN1 585 aa7.86□□□□□ -1.15
UBR1-211ENST00000569971 CDHR5Q9HBB8 845 aa7.85□□□□□ -1.15
UBR1-211ENST00000569971 C3orf80F5H4A9 247 aa7.83□□□□□ -1.16
UBR1-211ENST00000569971 ARHGEF1Q92888 912 aaKnown RBP7.83□□□□□ -1.16
UBR1-211ENST00000569971 NPDC1Q9NQX5 325 aaPredicted RBP7.83□□□□□ -1.16
UBR1-211ENST00000569971 NRG2O14511 850 aaPredicted RBP7.82□□□□□ -1.16
UBR1-211ENST00000569971 GGCXP38435 758 aa7.82□□□□□ -1.16
UBR1-211ENST00000569971 TMUB1Q9BVT8 246 aa7.82□□□□□ -1.16
UBR1-211ENST00000569971 APLP1P51693 650 aa7.81□□□□□ -1.16
UBR1-211ENST00000569971 PPP1R18Q6NYC8 613 aa7.81□□□□□ -1.16
UBR1-211ENST00000569971 PADI6Q6TGC4 694 aa7.81□□□□□ -1.16
UBR1-211ENST00000569971 PRKD2Q9BZL6 878 aa7.81□□□□□ -1.16
UBR1-211ENST00000569971 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.81□□□□□ -1.16
UBR1-211ENST00000569971 RNF40O75150 1001 aa7.8□□□□□ -1.16
UBR1-211ENST00000569971 P3H3Q8IVL6 736 aa7.8□□□□□ -1.16
UBR1-211ENST00000569971 GFRA3O60609 400 aa7.79□□□□□ -1.16
UBR1-211ENST00000569971 SWT1Q5T5J6 900 aaKnown RBP7.79□□□□□ -1.16
UBR1-211ENST00000569971 KCNV2Q8TDN2 545 aa7.79□□□□□ -1.16
UBR1-211ENST00000569971 EYA1Q99502 592 aa7.79□□□□□ -1.16
UBR1-211ENST00000569971 TRAF7Q6Q0C0 670 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms