RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 URB2Q14146 1524 aaKnown RBP10.48□□□□□ -0.73
GDE1-204ENST00000569773 GRXCR2A6NFK2 248 aa10.47□□□□□ -0.73
GDE1-204ENST00000569773 HOXB3P14651 431 aaPredicted RBP10.47□□□□□ -0.73
GDE1-204ENST00000569773 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
GDE1-204ENST00000569773 ZNF316A6NFI3 1004 aaPredicted RBP10.46□□□□□ -0.73
GDE1-204ENST00000569773 DDX12PQ92771 950 aa10.46□□□□□ -0.73
GDE1-204ENST00000569773 RBM26Q5T8P6 1007 aaKnown RBP10.45□□□□□ -0.74
GDE1-204ENST00000569773 PTGER2P43116 358 aa10.43□□□□□ -0.74
GDE1-204ENST00000569773 ANO8Q9HCE9 1232 aaPredicted RBP10.43□□□□□ -0.74
GDE1-204ENST00000569773 CCDC88BA6NC98 1476 aa10.42□□□□□ -0.74
GDE1-204ENST00000569773 RIMBP2O15034 1052 aa10.42□□□□□ -0.74
GDE1-204ENST00000569773 ARSIQ5FYB1 569 aa10.42□□□□□ -0.74
GDE1-204ENST00000569773 KHSRPQ92945 711 aaKnown RBP eCLIP10.42□□□□□ -0.74
GDE1-204ENST00000569773 ZNF710Q8N1W2 664 aa10.41□□□□□ -0.74
GDE1-204ENST00000569773 NUDT7P0C024 238 aa10.4□□□□□ -0.74
GDE1-204ENST00000569773 ZC3H15Q8WU90 426 aaKnown RBP10.4□□□□□ -0.74
GDE1-204ENST00000569773 KDM4FA0A1W2PPD8 638 aa10.39□□□□□ -0.75
GDE1-204ENST00000569773 OSBPP22059 807 aa10.39□□□□□ -0.75
GDE1-204ENST00000569773 GPR153Q6NV75 609 aa10.39□□□□□ -0.75
GDE1-204ENST00000569773 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
GDE1-204ENST00000569773 GPIHBP1Q8IV16 184 aa10.38□□□□□ -0.75
GDE1-204ENST00000569773 PRIM1P49642 420 aaKnown RBP10.36□□□□□ -0.75
GDE1-204ENST00000569773 EMP3P54852 163 aa10.36□□□□□ -0.75
GDE1-204ENST00000569773 TOPBP1Q92547 1522 aa10.34□□□□□ -0.75
GDE1-204ENST00000569773 PHF14O94880 888 aa10.34□□□□□ -0.75
GDE1-204ENST00000569773 PCDHGA10Q9Y5H3 936 aa10.34□□□□□ -0.75
GDE1-204ENST00000569773 NUTM2FA1L443 756 aa10.33□□□□□ -0.76
GDE1-204ENST00000569773 MARVELD3Q96A59 401 aa10.33□□□□□ -0.76
GDE1-204ENST00000569773 ZNF608Q9ULD9 1512 aaPredicted RBP10.33□□□□□ -0.76
GDE1-204ENST00000569773 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
GDE1-204ENST00000569773 EPAS1Q99814 870 aa10.32□□□□□ -0.76
GDE1-204ENST00000569773 DNMBPQ6XZF7 1577 aa10.31□□□□□ -0.76
GDE1-204ENST00000569773 IFT140Q96RY7 1462 aa10.31□□□□□ -0.76
GDE1-204ENST00000569773 SPNS2Q8IVW8 549 aa10.31□□□□□ -0.76
GDE1-204ENST00000569773 RBM33Q96EV2 1170 aaKnown RBP10.31□□□□□ -0.76
GDE1-204ENST00000569773 TARBP1Q13395 1621 aaKnown RBP10.31□□□□□ -0.76
GDE1-204ENST00000569773 GPR37O15354 613 aa10.3□□□□□ -0.76
GDE1-204ENST00000569773 ZMYND10O75800 440 aa10.3□□□□□ -0.76
GDE1-204ENST00000569773 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
GDE1-204ENST00000569773 FOSBP53539 338 aa10.3□□□□□ -0.76
GDE1-204ENST00000569773 EN1Q05925 392 aaPredicted RBP10.3□□□□□ -0.76
GDE1-204ENST00000569773 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
GDE1-204ENST00000569773 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
GDE1-204ENST00000569773 LHX6Q9UPM6 363 aa10.3□□□□□ -0.76
GDE1-204ENST00000569773 EIF4G3O43432 1585 aaKnown RBP10.3□□□□□ -0.76
GDE1-204ENST00000569773 MAP3K7O43318 606 aa10.29□□□□□ -0.76
GDE1-204ENST00000569773 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
GDE1-204ENST00000569773 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
GDE1-204ENST00000569773 BARGINQ6ZT62 677 aa10.27□□□□□ -0.77
GDE1-204ENST00000569773 FBXW7Q969H0 707 aa10.27□□□□□ -0.77
GDE1-204ENST00000569773 CDHR5Q9HBB8 845 aa10.27□□□□□ -0.77
GDE1-204ENST00000569773 RIMBP3CA6NJZ7 1639 aa10.26□□□□□ -0.77
GDE1-204ENST00000569773 RIMBP3BA6NNM3 1639 aa10.26□□□□□ -0.77
GDE1-204ENST00000569773 RIMBP3Q9UFD9 1639 aa10.26□□□□□ -0.77
GDE1-204ENST00000569773 TSR1Q2NL82 804 aaKnown RBP10.26□□□□□ -0.77
GDE1-204ENST00000569773 ZDHHC16Q969W1 377 aa10.26□□□□□ -0.77
GDE1-204ENST00000569773 SLC24A3Q9HC58 644 aa10.26□□□□□ -0.77
GDE1-204ENST00000569773 CHD1O14646 1710 aa10.26□□□□□ -0.77
GDE1-204ENST00000569773 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
GDE1-204ENST00000569773 FCHSD2O94868 740 aa10.24□□□□□ -0.77
GDE1-204ENST00000569773 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
GDE1-204ENST00000569773 FAM205CA6NFA0 338 aa10.23□□□□□ -0.77
GDE1-204ENST00000569773 PTGDRQ13258 359 aa10.23□□□□□ -0.77
GDE1-204ENST00000569773 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
GDE1-204ENST00000569773 HIC1Q14526 733 aa10.22□□□□□ -0.77
GDE1-204ENST00000569773 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
GDE1-204ENST00000569773 KRI1Q8N9T8 703 aaKnown RBP10.22□□□□□ -0.77
GDE1-204ENST00000569773 PSDA5PKW4 1024 aaPredicted RBP10.21□□□□□ -0.77
GDE1-204ENST00000569773 GNPATO15228 680 aa10.21□□□□□ -0.77
GDE1-204ENST00000569773 C6orf132Q5T0Z8 1188 aa10.21□□□□□ -0.77
GDE1-204ENST00000569773 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.77
GDE1-204ENST00000569773 ARHGEF11O15085 1522 aa10.2□□□□□ -0.78
GDE1-204ENST00000569773 AQRO60306 1485 aaKnown RBP eCLIP10.2□□□□□ -0.78
GDE1-204ENST00000569773 FECHP22830 423 aa10.2□□□□□ -0.78
GDE1-204ENST00000569773 WDR97A6NE52 1622 aa10.19□□□□□ -0.78
GDE1-204ENST00000569773 CUX1P39880 1505 aa10.18□□□□□ -0.78
GDE1-204ENST00000569773 RAD54L2Q9Y4B4 1467 aa10.17□□□□□ -0.78
GDE1-204ENST00000569773 ERBB3P21860 1342 aa10.16□□□□□ -0.78
GDE1-204ENST00000569773 MAP2K5Q13163 448 aa10.16□□□□□ -0.78
GDE1-204ENST00000569773 AK7Q96M32 723 aa10.16□□□□□ -0.78
GDE1-204ENST00000569773 BCL2L12Q9HB09 334 aa10.16□□□□□ -0.78
GDE1-204ENST00000569773 FGD5Q6ZNL6 1462 aa10.16□□□□□ -0.78
GDE1-204ENST00000569773 KRTAP3-3Q9BYR6 98 aa10.15□□□□□ -0.78
GDE1-204ENST00000569773 KRTAP3-2Q9BYR7 98 aa10.15□□□□□ -0.78
GDE1-204ENST00000569773 MINK1Q8N4C8 1332 aaPredicted RBP10.14□□□□□ -0.79
GDE1-204ENST00000569773 VARS2Q5ST30 1063 aaKnown RBP10.14□□□□□ -0.79
GDE1-204ENST00000569773 SOGA1O94964 1423 aa10.14□□□□□ -0.79
GDE1-204ENST00000569773 COL9A1P20849 921 aa10.13□□□□□ -0.79
GDE1-204ENST00000569773 CERKQ8TCT0 537 aa10.13□□□□□ -0.79
GDE1-204ENST00000569773 CCDC102AQ96A19 550 aa10.13□□□□□ -0.79
GDE1-204ENST00000569773 IRF6O14896 467 aa10.12□□□□□ -0.79
GDE1-204ENST00000569773 PTPREP23469 700 aa10.12□□□□□ -0.79
GDE1-204ENST00000569773 CLASP1Q7Z460 1538 aa10.12□□□□□ -0.79
GDE1-204ENST00000569773 PBRM1Q86U86 1689 aa10.12□□□□□ -0.79
GDE1-204ENST00000569773 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
GDE1-204ENST00000569773 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
GDE1-204ENST00000569773 PADI6Q6TGC4 694 aa10.11□□□□□ -0.79
GDE1-204ENST00000569773 TDRD9Q8NDG6 1382 aaKnown RBP10.11□□□□□ -0.79
GDE1-204ENST00000569773 ARAP1Q96P48 1450 aa10.1□□□□□ -0.79
GDE1-204ENST00000569773 TRIM66O15016 1216 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms