RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 ARIH1Q9Y4X5 557 aaPredicted RBP8.3□□□□□ -1.08
BBS4-215ENST00000569001 SPDYE16A6NNV3 312 aaPredicted RBP8.29□□□□□ -1.08
BBS4-215ENST00000569001 PTGER2P43116 358 aa8.29□□□□□ -1.08
BBS4-215ENST00000569001 PROX2Q3B8N5 592 aa8.29□□□□□ -1.08
BBS4-215ENST00000569001 KCNH8Q96L42 1107 aa8.29□□□□□ -1.08
BBS4-215ENST00000569001 VPS9D1Q9Y2B5 631 aa8.29□□□□□ -1.08
BBS4-215ENST00000569001 MLLT3P42568 568 aaPredicted RBP8.28□□□□□ -1.08
BBS4-215ENST00000569001 FBXW7Q969H0 707 aa8.28□□□□□ -1.08
BBS4-215ENST00000569001 ZBED2Q9BTP6 218 aa8.28□□□□□ -1.08
BBS4-215ENST00000569001 MAP3K7O43318 606 aa8.27□□□□□ -1.09
BBS4-215ENST00000569001 HRO43593 1189 aa8.27□□□□□ -1.09
BBS4-215ENST00000569001 C6orf132Q5T0Z8 1188 aa8.27□□□□□ -1.09
BBS4-215ENST00000569001 EPAS1Q99814 870 aa8.26□□□□□ -1.09
BBS4-215ENST00000569001 TK2O00142 265 aa8.25□□□□□ -1.09
BBS4-215ENST00000569001 EN1Q05925 392 aaPredicted RBP8.25□□□□□ -1.09
BBS4-215ENST00000569001 ARHGEF1Q92888 912 aaKnown RBP8.25□□□□□ -1.09
BBS4-215ENST00000569001 CDHR5Q9HBB8 845 aa8.25□□□□□ -1.09
BBS4-215ENST00000569001 PPP1R3GB7ZBB8 358 aa8.24□□□□□ -1.09
BBS4-215ENST00000569001 OSBPP22059 807 aa8.24□□□□□ -1.09
BBS4-215ENST00000569001 SEMA3EO15041 775 aa8.23□□□□□ -1.09
BBS4-215ENST00000569001 KCTD12Q96CX2 325 aaKnown RBP8.21□□□□□ -1.1
BBS4-215ENST00000569001 P3H3Q8IVL6 736 aa8.2□□□□□ -1.1
BBS4-215ENST00000569001 STAC3Q96MF2 364 aa8.2□□□□□ -1.1
BBS4-215ENST00000569001 SLC4A5Q9BY07 1137 aa8.2□□□□□ -1.1
BBS4-215ENST00000569001 BHMG1C9JSJ3 638 aaPredicted RBP8.19□□□□□ -1.1
BBS4-215ENST00000569001 KIAA1468Q9P260 1216 aa8.19□□□□□ -1.1
BBS4-215ENST00000569001 SEPT9Q9UHD8 586 aaPredicted RBP8.19□□□□□ -1.1
BBS4-215ENST00000569001 FAM198AQ9UFP1 575 aa8.18□□□□□ -1.1
BBS4-215ENST00000569001 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
BBS4-215ENST00000569001 MRPL50Q8N5N7 158 aaKnown RBP8.17□□□□□ -1.1
BBS4-215ENST00000569001 TSKSQ9UJT2 592 aa8.17□□□□□ -1.1
BBS4-215ENST00000569001 TRIM6-TRIM34B2RNG4 842 aa8.16□□□□□ -1.1
BBS4-215ENST00000569001 SMAPO00193 183 aa8.15□□□□□ -1.1
BBS4-215ENST00000569001 VSIG10Q8N0Z9 540 aa8.15□□□□□ -1.1
BBS4-215ENST00000569001 CDCA7LQ96GN5 454 aa8.15□□□□□ -1.1
BBS4-215ENST00000569001 RABGEF1Q9UJ41 708 aa8.15□□□□□ -1.1
BBS4-215ENST00000569001 PTPN5P54829 565 aa8.14□□□□□ -1.11
BBS4-215ENST00000569001 NPDC1Q9NQX5 325 aaPredicted RBP8.14□□□□□ -1.11
BBS4-215ENST00000569001 GOLGA8CPA6NN73 597 aa8.13□□□□□ -1.11
BBS4-215ENST00000569001 PRSS12P56730 875 aa8.13□□□□□ -1.11
BBS4-215ENST00000569001 WNT2BQ93097 391 aa8.13□□□□□ -1.11
BBS4-215ENST00000569001 NBPF3Q9H094 633 aa8.13□□□□□ -1.11
BBS4-215ENST00000569001 RBM26Q5T8P6 1007 aaKnown RBP8.12□□□□□ -1.11
BBS4-215ENST00000569001 NUTM2FA1L443 756 aa8.11□□□□□ -1.11
BBS4-215ENST00000569001 TESPA1A2RU30 521 aaPredicted RBP8.11□□□□□ -1.11
BBS4-215ENST00000569001 BCAMP50895 628 aa8.11□□□□□ -1.11
BBS4-215ENST00000569001 PADI6Q6TGC4 694 aa8.11□□□□□ -1.11
BBS4-215ENST00000569001 THSD4Q6ZMP0 1018 aa8.1□□□□□ -1.11
BBS4-215ENST00000569001 ZFRQ96KR1 1074 aaKnown RBP8.09□□□□□ -1.11
BBS4-215ENST00000569001 FAM161AQ3B820 660 aa8.08□□□□□ -1.12
BBS4-215ENST00000569001 PACS2Q86VP3 889 aa8.08□□□□□ -1.12
BBS4-215ENST00000569001 HCSTQ9UBK5 93 aa8.08□□□□□ -1.12
BBS4-215ENST00000569001 PNMA3Q9UL41 463 aa8.08□□□□□ -1.12
BBS4-215ENST00000569001 ONECUT3O60422 494 aaPredicted RBP8.07□□□□□ -1.12
BBS4-215ENST00000569001 PTGDRQ13258 359 aa8.07□□□□□ -1.12
BBS4-215ENST00000569001 NUDT18Q6ZVK8 323 aa8.07□□□□□ -1.12
BBS4-215ENST00000569001 FAM98CQ17RN3 349 aaKnown RBP8.06□□□□□ -1.12
BBS4-215ENST00000569001 ANKK1Q8NFD2 765 aa8.06□□□□□ -1.12
BBS4-215ENST00000569001 CERKQ8TCT0 537 aa8.06□□□□□ -1.12
BBS4-215ENST00000569001 TATDN2Q93075 761 aa8.06□□□□□ -1.12
BBS4-215ENST00000569001 LAPTM4BQ86VI4 370 aa8.04□□□□□ -1.12
BBS4-215ENST00000569001 TTC13Q8NBP0 860 aa8.04□□□□□ -1.12
BBS4-215ENST00000569001 NBPF26B4DH59 902 aa8.03□□□□□ -1.12
BBS4-215ENST00000569001 SAMD7Q7Z3H4 446 aa8.03□□□□□ -1.12
BBS4-215ENST00000569001 SOWAHBA6NEL2 793 aa8.02□□□□□ -1.13
BBS4-215ENST00000569001 FECHP22830 423 aa8.02□□□□□ -1.13
BBS4-215ENST00000569001 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
BBS4-215ENST00000569001 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.01□□□□□ -1.13
BBS4-215ENST00000569001 GPR37O15354 613 aa8□□□□□ -1.13
BBS4-215ENST00000569001 RNF40O75150 1001 aa8□□□□□ -1.13
BBS4-215ENST00000569001 FCHSD2O94868 740 aa8□□□□□ -1.13
BBS4-215ENST00000569001 LRCH3Q96II8 777 aa8□□□□□ -1.13
BBS4-215ENST00000569001 PLA2G2EQ9NZK7 142 aa8□□□□□ -1.13
BBS4-215ENST00000569001 RBM27Q9P2N5 1060 aaKnown RBP8□□□□□ -1.13
BBS4-215ENST00000569001 HPS5Q9UPZ3 1129 aa8□□□□□ -1.13
BBS4-215ENST00000569001 SMYD5Q6GMV2 418 aa7.99□□□□□ -1.13
BBS4-215ENST00000569001 EYA1Q99502 592 aa7.99□□□□□ -1.13
BBS4-215ENST00000569001 ADGRG1Q9Y653 693 aa7.98□□□□□ -1.13
BBS4-215ENST00000569001 SWT1Q5T5J6 900 aaKnown RBP7.97□□□□□ -1.13
BBS4-215ENST00000569001 GPIHBP1Q8IV16 184 aa7.96□□□□□ -1.14
BBS4-215ENST00000569001 NLRP7Q8WX94 980 aa7.96□□□□□ -1.14
BBS4-215ENST00000569001 TSR3Q9UJK0 312 aaKnown RBP7.95□□□□□ -1.14
BBS4-215ENST00000569001 GNPATO15228 680 aa7.94□□□□□ -1.14
BBS4-215ENST00000569001 PPP4CP60510 307 aa7.94□□□□□ -1.14
BBS4-215ENST00000569001 HIC1Q14526 733 aa7.94□□□□□ -1.14
BBS4-215ENST00000569001 RCCD1A6NED2 376 aa7.92□□□□□ -1.14
BBS4-215ENST00000569001 RBM46Q8TBY0 533 aaKnown RBP7.92□□□□□ -1.14
BBS4-215ENST00000569001 APLP1P51693 650 aa7.9□□□□□ -1.14
BBS4-215ENST00000569001 PHOX2BQ99453 314 aa7.9□□□□□ -1.14
BBS4-215ENST00000569001 DNAJB2P25686 324 aa7.89□□□□□ -1.15
BBS4-215ENST00000569001 HDGFP51858 240 aaKnown RBP7.89□□□□□ -1.15
BBS4-215ENST00000569001 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.89□□□□□ -1.15
BBS4-215ENST00000569001 METTL3Q86U44 580 aaKnown RBP7.89□□□□□ -1.15
BBS4-215ENST00000569001 PXYLP1Q8TE99 480 aa7.89□□□□□ -1.15
BBS4-215ENST00000569001 TMEM134Q9H6X4 195 aa7.89□□□□□ -1.15
BBS4-215ENST00000569001 TULP1O00294 542 aaPredicted RBP7.87□□□□□ -1.15
BBS4-215ENST00000569001 LMOD2Q6P5Q4 547 aa7.87□□□□□ -1.15
BBS4-215ENST00000569001 SLF2Q8IX21 1173 aa7.86□□□□□ -1.15
BBS4-215ENST00000569001 OATP04181 439 aa7.85□□□□□ -1.15
BBS4-215ENST00000569001 SLC10A3P09131 477 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms