RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 MYT1LQ9UL68 1186 aa17.68■□□□□ 0.42
DNAAF4-CCPG1-202ENST00000568310 NBR1Q14596 966 aa17.67■□□□□ 0.42
DNAAF4-CCPG1-202ENST00000568310 GRXCR2A6NFK2 248 aa17.65■□□□□ 0.42
DNAAF4-CCPG1-202ENST00000568310 RBM33Q96EV2 1170 aaKnown RBP17.65■□□□□ 0.42
DNAAF4-CCPG1-202ENST00000568310 SLC4A5Q9BY07 1137 aa17.64■□□□□ 0.41
DNAAF4-CCPG1-202ENST00000568310 VPS9D1Q9Y2B5 631 aa17.63■□□□□ 0.41
DNAAF4-CCPG1-202ENST00000568310 KDM2AQ9Y2K7 1162 aa17.63■□□□□ 0.41
DNAAF4-CCPG1-202ENST00000568310 PPP1R3GB7ZBB8 358 aa17.62■□□□□ 0.41
DNAAF4-CCPG1-202ENST00000568310 C6orf132Q5T0Z8 1188 aa17.62■□□□□ 0.41
DNAAF4-CCPG1-202ENST00000568310 ZBED2Q9BTP6 218 aa17.62■□□□□ 0.41
DNAAF4-CCPG1-202ENST00000568310 HRO43593 1189 aa17.61■□□□□ 0.41
DNAAF4-CCPG1-202ENST00000568310 EN1Q05925 392 aaPredicted RBP17.61■□□□□ 0.41
DNAAF4-CCPG1-202ENST00000568310 RNF166Q96A37 237 aaPredicted RBP17.61■□□□□ 0.41
DNAAF4-CCPG1-202ENST00000568310 COL9A1P20849 921 aa17.59■□□□□ 0.41
DNAAF4-CCPG1-202ENST00000568310 MAP3K7O43318 606 aa17.58■□□□□ 0.4
DNAAF4-CCPG1-202ENST00000568310 VSIG10Q8N0Z9 540 aa17.58■□□□□ 0.4
DNAAF4-CCPG1-202ENST00000568310 OSBPP22059 807 aa17.54■□□□□ 0.4
DNAAF4-CCPG1-202ENST00000568310 STAC3Q96MF2 364 aa17.54■□□□□ 0.4
DNAAF4-CCPG1-202ENST00000568310 TSR1Q2NL82 804 aaKnown RBP17.53■□□□□ 0.4
DNAAF4-CCPG1-202ENST00000568310 PRIM1P49642 420 aaKnown RBP17.52■□□□□ 0.4
DNAAF4-CCPG1-202ENST00000568310 MLLT3P42568 568 aaPredicted RBP17.5■□□□□ 0.39
DNAAF4-CCPG1-202ENST00000568310 PROX2Q3B8N5 592 aa17.5■□□□□ 0.39
DNAAF4-CCPG1-202ENST00000568310 BHMG1C9JSJ3 638 aaPredicted RBP17.49■□□□□ 0.39
DNAAF4-CCPG1-202ENST00000568310 RABGEF1Q9UJ41 708 aa17.45■□□□□ 0.38
DNAAF4-CCPG1-202ENST00000568310 SEMA3EO15041 775 aa17.44■□□□□ 0.38
DNAAF4-CCPG1-202ENST00000568310 NBPF3Q9H094 633 aa17.43■□□□□ 0.38
DNAAF4-CCPG1-202ENST00000568310 ONECUT3O60422 494 aaPredicted RBP17.42■□□□□ 0.38
DNAAF4-CCPG1-202ENST00000568310 MRPL50Q8N5N7 158 aaKnown RBP17.42■□□□□ 0.38
DNAAF4-CCPG1-202ENST00000568310 CERKQ8TCT0 537 aa17.41■□□□□ 0.38
DNAAF4-CCPG1-202ENST00000568310 TRIM6-TRIM34B2RNG4 842 aa17.4■□□□□ 0.38
DNAAF4-CCPG1-202ENST00000568310 CDHR5Q9HBB8 845 aa17.39■□□□□ 0.37
DNAAF4-CCPG1-202ENST00000568310 KIAA1468Q9P260 1216 aa17.39■□□□□ 0.37
DNAAF4-CCPG1-202ENST00000568310 KCTD12Q96CX2 325 aaKnown RBP17.36■□□□□ 0.37
DNAAF4-CCPG1-202ENST00000568310 GOLGA8CPA6NN73 597 aa17.35■□□□□ 0.37
DNAAF4-CCPG1-202ENST00000568310 PRSS12P56730 875 aa17.34■□□□□ 0.37
DNAAF4-CCPG1-202ENST00000568310 CDCA7LQ96GN5 454 aa17.34■□□□□ 0.37
DNAAF4-CCPG1-202ENST00000568310 TSKSQ9UJT2 592 aa17.33■□□□□ 0.36
DNAAF4-CCPG1-202ENST00000568310 TESPA1A2RU30 521 aaPredicted RBP17.32■□□□□ 0.36
DNAAF4-CCPG1-202ENST00000568310 PACS2Q86VP3 889 aa17.32■□□□□ 0.36
DNAAF4-CCPG1-202ENST00000568310 LAPTM4BQ86VI4 370 aa17.3■□□□□ 0.36
DNAAF4-CCPG1-202ENST00000568310 NPDC1Q9NQX5 325 aaPredicted RBP17.3■□□□□ 0.36
DNAAF4-CCPG1-202ENST00000568310 HCSTQ9UBK5 93 aa17.29■□□□□ 0.36
DNAAF4-CCPG1-202ENST00000568310 WNT2BQ93097 391 aa17.28■□□□□ 0.36
DNAAF4-CCPG1-202ENST00000568310 SMYD5Q6GMV2 418 aa17.27■□□□□ 0.36
DNAAF4-CCPG1-202ENST00000568310 SEPT9Q9UHD8 586 aaPredicted RBP17.27■□□□□ 0.36
DNAAF4-CCPG1-202ENST00000568310 RBM27Q9P2N5 1060 aaKnown RBP17.26■□□□□ 0.35
DNAAF4-CCPG1-202ENST00000568310 FAM198AQ9UFP1 575 aa17.25■□□□□ 0.35
DNAAF4-CCPG1-202ENST00000568310 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
DNAAF4-CCPG1-202ENST00000568310 FAM98CQ17RN3 349 aaKnown RBP17.22■□□□□ 0.35
DNAAF4-CCPG1-202ENST00000568310 THSD4Q6ZMP0 1018 aa17.22■□□□□ 0.35
DNAAF4-CCPG1-202ENST00000568310 ZFRQ96KR1 1074 aaKnown RBP17.22■□□□□ 0.35
DNAAF4-CCPG1-202ENST00000568310 PTGDRQ13258 359 aa17.21■□□□□ 0.35
DNAAF4-CCPG1-202ENST00000568310 PADI6Q6TGC4 694 aa17.2■□□□□ 0.34
DNAAF4-CCPG1-202ENST00000568310 ANKK1Q8NFD2 765 aa17.2■□□□□ 0.34
DNAAF4-CCPG1-202ENST00000568310 PTPN5P54829 565 aa17.19■□□□□ 0.34
DNAAF4-CCPG1-202ENST00000568310 TATDN2Q93075 761 aa17.19■□□□□ 0.34
DNAAF4-CCPG1-202ENST00000568310 NBPF26B4DH59 902 aa17.18■□□□□ 0.34
DNAAF4-CCPG1-202ENST00000568310 RBM26Q5T8P6 1007 aaKnown RBP17.18■□□□□ 0.34
DNAAF4-CCPG1-202ENST00000568310 TTC13Q8NBP0 860 aa17.18■□□□□ 0.34
DNAAF4-CCPG1-202ENST00000568310 SMAPO00193 183 aa17.17■□□□□ 0.34
DNAAF4-CCPG1-202ENST00000568310 PNMA3Q9UL41 463 aa17.17■□□□□ 0.34
DNAAF4-CCPG1-202ENST00000568310 C3orf80F5H4A9 247 aa17.15■□□□□ 0.34
DNAAF4-CCPG1-202ENST00000568310 NUDT18Q6ZVK8 323 aa17.14■□□□□ 0.33
DNAAF4-CCPG1-202ENST00000568310 FCHSD2O94868 740 aa17.13■□□□□ 0.33
DNAAF4-CCPG1-202ENST00000568310 SOWAHBA6NEL2 793 aa17.12■□□□□ 0.33
DNAAF4-CCPG1-202ENST00000568310 BCAMP50895 628 aa17.11■□□□□ 0.33
DNAAF4-CCPG1-202ENST00000568310 LRCH3Q96II8 777 aa17.07■□□□□ 0.32
DNAAF4-CCPG1-202ENST00000568310 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.07■□□□□ 0.32
DNAAF4-CCPG1-202ENST00000568310 TULP1O00294 542 aaPredicted RBP17.05■□□□□ 0.32
DNAAF4-CCPG1-202ENST00000568310 HIC1Q14526 733 aa17.04■□□□□ 0.32
DNAAF4-CCPG1-202ENST00000568310 SAMD7Q7Z3H4 446 aa17.03■□□□□ 0.32
DNAAF4-CCPG1-202ENST00000568310 EYA1Q99502 592 aa17.02■□□□□ 0.32
DNAAF4-CCPG1-202ENST00000568310 HDGFP51858 240 aaKnown RBP17■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 GPIHBP1Q8IV16 184 aa16.99■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 WBP1LQ9NX94 342 aa16.99■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 TSR3Q9UJK0 312 aaKnown RBP16.99■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 ADGRG1Q9Y653 693 aa16.99■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 GNPATO15228 680 aa16.98■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 GPR37O15354 613 aa16.98■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 RBM46Q8TBY0 533 aaKnown RBP16.98■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 PLA2G2EQ9NZK7 142 aa16.98■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 NYAP1Q6ZVC0 841 aa16.96■□□□□ 0.31
DNAAF4-CCPG1-202ENST00000568310 FAM161AQ3B820 660 aa16.95■□□□□ 0.3
DNAAF4-CCPG1-202ENST00000568310 PPP4CP60510 307 aa16.94■□□□□ 0.3
DNAAF4-CCPG1-202ENST00000568310 FECHP22830 423 aa16.92■□□□□ 0.3
DNAAF4-CCPG1-202ENST00000568310 SWT1Q5T5J6 900 aaKnown RBP16.92■□□□□ 0.3
DNAAF4-CCPG1-202ENST00000568310 RNF40O75150 1001 aa16.89■□□□□ 0.29
DNAAF4-CCPG1-202ENST00000568310 OATP04181 439 aa16.89■□□□□ 0.29
DNAAF4-CCPG1-202ENST00000568310 DNAJB2P25686 324 aa16.89■□□□□ 0.29
DNAAF4-CCPG1-202ENST00000568310 RCCD1A6NED2 376 aa16.86■□□□□ 0.29
DNAAF4-CCPG1-202ENST00000568310 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.86■□□□□ 0.29
DNAAF4-CCPG1-202ENST00000568310 SLF2Q8IX21 1173 aa16.86■□□□□ 0.29
DNAAF4-CCPG1-202ENST00000568310 SLC4A3P48751 1232 aa16.85■□□□□ 0.29
DNAAF4-CCPG1-202ENST00000568310 PXYLP1Q8TE99 480 aa16.85■□□□□ 0.29
DNAAF4-CCPG1-202ENST00000568310 TMEM134Q9H6X4 195 aa16.84■□□□□ 0.29
DNAAF4-CCPG1-202ENST00000568310 METTL3Q86U44 580 aaKnown RBP16.83■□□□□ 0.28
DNAAF4-CCPG1-202ENST00000568310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.82■□□□□ 0.28
DNAAF4-CCPG1-202ENST00000568310 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
DNAAF4-CCPG1-202ENST00000568310 SLC24A1O60721 1099 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms