RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 FANCAO15360 1455 aa5.54□□□□□ -1.52
LPCAT2-208ENST00000566915 MCCP23508 829 aa5.54□□□□□ -1.52
LPCAT2-208ENST00000566915 DNTTIP2Q5QJE6 756 aaKnown RBP5.54□□□□□ -1.52
LPCAT2-208ENST00000566915 HSPA5P11021 654 aaKnown RBP5.54□□□□□ -1.52
LPCAT2-208ENST00000566915 B4GALNT3Q6L9W6 998 aa5.54□□□□□ -1.52
LPCAT2-208ENST00000566915 MSNP26038 577 aaKnown RBP5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 TSHZ2Q9NRE2 1034 aa5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 TROQ12816 1431 aaPredicted RBP5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 CASKIN1Q8WXD9 1431 aa5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 FANCIQ9NVI1 1328 aa5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 PMFBP1Q8TBY8 1022 aa5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 KIF3BO15066 747 aa5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 RWDD1Q9H446 243 aaPredicted RBP5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 RCAN3Q9UKA8 241 aa5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 EIF3AQ14152 1382 aaKnown RBP5.53□□□□□ -1.52
LPCAT2-208ENST00000566915 ARAP1Q96P48 1450 aa5.52□□□□□ -1.53
LPCAT2-208ENST00000566915 FYCO1Q9BQS8 1478 aa5.52□□□□□ -1.53
LPCAT2-208ENST00000566915 CFAP74Q9C0B2 1584 aa5.52□□□□□ -1.53
LPCAT2-208ENST00000566915 RGS3P49796 1198 aa5.52□□□□□ -1.53
LPCAT2-208ENST00000566915 NLRP13Q86W25 1043 aa5.52□□□□□ -1.53
LPCAT2-208ENST00000566915 LAS1LQ9Y4W2 734 aaKnown RBP5.52□□□□□ -1.53
LPCAT2-208ENST00000566915 SCAPERQ9BY12 1400 aa5.51□□□□□ -1.53
LPCAT2-208ENST00000566915 RGL3Q3MIN7 710 aa5.51□□□□□ -1.53
LPCAT2-208ENST00000566915 THEMISQ8N1K5 641 aaPredicted RBP5.51□□□□□ -1.53
LPCAT2-208ENST00000566915 SYAP1Q96A49 352 aaPredicted RBP5.51□□□□□ -1.53
LPCAT2-208ENST00000566915 KIF14Q15058 1648 aa5.51□□□□□ -1.53
LPCAT2-208ENST00000566915 ARXQ96QS3 562 aa5.51□□□□□ -1.53
LPCAT2-208ENST00000566915 AAMPQ13685 434 aa5.51□□□□□ -1.53
LPCAT2-208ENST00000566915 ADGRL1O94910 1474 aa5.51□□□□□ -1.53
LPCAT2-208ENST00000566915 CLASP1Q7Z460 1538 aa5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 DHX57Q6P158 1386 aaKnown RBP5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 HDAC5Q9UQL6 1122 aa5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 KIAA0556O60303 1618 aa5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 CNTLNQ9NXG0 1405 aa5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 MPHOSPH9Q99550 1183 aa5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 NEO1Q92859 1461 aa5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 KIF15Q9NS87 1388 aa5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 ABCC10Q5T3U5 1492 aa5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 HTATSF1O43719 755 aaKnown RBP5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 DCAF11Q8TEB1 546 aa5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 ZBED9Q6R2W3 1325 aa5.5□□□□□ -1.53
LPCAT2-208ENST00000566915 HNRNPMP52272 730 aaKnown RBP eCLIP5.49□□□□□ -1.53
LPCAT2-208ENST00000566915 STAC3Q96MF2 364 aa5.49□□□□□ -1.53
LPCAT2-208ENST00000566915 FRAT1Q92837 279 aaPredicted RBP5.49□□□□□ -1.53
LPCAT2-208ENST00000566915 EHBP1L1Q8N3D4 1523 aa5.49□□□□□ -1.53
LPCAT2-208ENST00000566915 MYOM3Q5VTT5 1437 aa5.49□□□□□ -1.53
LPCAT2-208ENST00000566915 RUSC2Q8N2Y8 1516 aa5.49□□□□□ -1.53
LPCAT2-208ENST00000566915 KIAA2012Q0VF49 1180 aa5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 CSPP1Q1MSJ5 1256 aa5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 RSPH6AQ9H0K4 717 aa5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 CTTNBP2Q8WZ74 1663 aa5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 GOLGA6L4A6NEF3 574 aa5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 RAPGEF6Q8TEU7 1601 aa5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 MORC1Q86VD1 984 aa5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 ANKLE2Q86XL3 938 aa5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 GOLGA2Q08379 1002 aa5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 SKOR2Q2VWA4 1001 aaPredicted RBP5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 CENPQQ7L2Z9 268 aaPredicted RBP5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 KDM6BO15054 1643 aa5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 MYBBP1AQ9BQG0 1328 aaKnown RBP5.48□□□□□ -1.53
LPCAT2-208ENST00000566915 GOLGA6L3A6NEY3 463 aa5.47□□□□□ -1.53
LPCAT2-208ENST00000566915 DDX11L8A8MPP1 907 aa5.47□□□□□ -1.53
LPCAT2-208ENST00000566915 KANK4Q5T7N3 995 aaPredicted RBP5.47□□□□□ -1.53
LPCAT2-208ENST00000566915 POGKQ9P215 609 aa5.47□□□□□ -1.53
LPCAT2-208ENST00000566915 PKD2Q13563 968 aa5.47□□□□□ -1.53
LPCAT2-208ENST00000566915 CC2D1BQ5T0F9 858 aaKnown RBP5.47□□□□□ -1.53
LPCAT2-208ENST00000566915 CHMP4CQ96CF2 233 aa5.47□□□□□ -1.53
LPCAT2-208ENST00000566915 PHF14O94880 888 aa5.46□□□□□ -1.53
LPCAT2-208ENST00000566915 ZNF518AQ6AHZ1 1483 aa5.46□□□□□ -1.54
LPCAT2-208ENST00000566915 CGNL1Q0VF96 1302 aa5.46□□□□□ -1.54
LPCAT2-208ENST00000566915 EPRSP07814 1512 aaKnown RBP5.46□□□□□ -1.54
LPCAT2-208ENST00000566915 LMOD3Q0VAK6 560 aa5.46□□□□□ -1.54
LPCAT2-208ENST00000566915 MAPKBP1O60336 1514 aa5.46□□□□□ -1.54
LPCAT2-208ENST00000566915 RAPGEF3O95398 923 aa5.46□□□□□ -1.54
LPCAT2-208ENST00000566915 MEX3CQ5U5Q3 659 aaKnown RBP5.46□□□□□ -1.54
LPCAT2-208ENST00000566915 HDGFL2Q7Z4V5 671 aaPredicted RBP5.46□□□□□ -1.54
LPCAT2-208ENST00000566915 PLCH2O75038 1416 aa5.45□□□□□ -1.54
LPCAT2-208ENST00000566915 NUP155O75694 1391 aa5.45□□□□□ -1.54
LPCAT2-208ENST00000566915 HMMRO75330 724 aa5.45□□□□□ -1.54
LPCAT2-208ENST00000566915 FAM161AQ3B820 660 aa5.45□□□□□ -1.54
LPCAT2-208ENST00000566915 NEUROD2Q15784 382 aa5.45□□□□□ -1.54
LPCAT2-208ENST00000566915 C9orf84Q5VXU9 1444 aa5.45□□□□□ -1.54
LPCAT2-208ENST00000566915 MAGI2Q86UL8 1455 aa5.45□□□□□ -1.54
LPCAT2-208ENST00000566915 U2SURPO15042 1029 aaKnown RBP5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 KCNJ4P48050 445 aa5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 KIAA1211Q6ZU35 1233 aa5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 L3MBTL2Q969R5 705 aa5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 CCDC34Q96HJ3 373 aa5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 PRKRIP1Q9H875 184 aaPredicted RBP5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 KDM5BQ9UGL1 1544 aa5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 UHRF1BP1Q6BDS2 1440 aa5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 FGD1P98174 961 aa5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 MIA2Q96PC5 1412 aa5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 CENPJQ9HC77 1338 aaPredicted RBP5.44□□□□□ -1.54
LPCAT2-208ENST00000566915 OS9Q13438 667 aaPredicted RBP5.43□□□□□ -1.54
LPCAT2-208ENST00000566915 ATP10BO94823 1461 aa5.43□□□□□ -1.54
LPCAT2-208ENST00000566915 TPM4P67936 248 aa5.43□□□□□ -1.54
LPCAT2-208ENST00000566915 GSE1Q14687 1217 aa5.43□□□□□ -1.54
LPCAT2-208ENST00000566915 E9PSI1 815 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms