RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ABCC2Q92887 1545 aa29.14■■■□□ 2.26
SPSB3-208ENST00000566339 LRPPRCP42704 1394 aaKnown RBP29.13■■■□□ 2.25
SPSB3-208ENST00000566339 C9orf84Q5VXU9 1444 aa29.13■■■□□ 2.25
SPSB3-208ENST00000566339 PNISRQ8TF01 805 aaKnown RBP29.12■■■□□ 2.25
SPSB3-208ENST00000566339 PREX2Q70Z35 1606 aa29.12■■■□□ 2.25
SPSB3-208ENST00000566339 PKD2Q13563 968 aa29.11■■■□□ 2.25
SPSB3-208ENST00000566339 UHRF1BP1LA0JNW5 1464 aa29.1■■■□□ 2.25
SPSB3-208ENST00000566339 RALBP1Q15311 655 aa29.1■■■□□ 2.25
SPSB3-208ENST00000566339 E9PCH4 1651 aa29.09■■■□□ 2.25
SPSB3-208ENST00000566339 INSRP06213 1382 aa29.07■■■□□ 2.24
SPSB3-208ENST00000566339 PLEKHD1A6NEE1 506 aa29.07■■■□□ 2.24
SPSB3-208ENST00000566339 CDC42BPBQ9Y5S2 1711 aa29.06■■■□□ 2.24
SPSB3-208ENST00000566339 DIP2BQ9P265 1576 aa29.05■■■□□ 2.24
SPSB3-208ENST00000566339 ZMYM4Q5VZL5 1548 aa29.04■■■□□ 2.24
SPSB3-208ENST00000566339 NOP58Q9Y2X3 529 aaKnown RBP29.04■■■□□ 2.24
SPSB3-208ENST00000566339 SAMD9LQ8IVG5 1584 aa29.04■■■□□ 2.24
SPSB3-208ENST00000566339 MYBBP1AQ9BQG0 1328 aaKnown RBP29.03■■■□□ 2.24
SPSB3-208ENST00000566339 TMC1Q8TDI8 760 aa29.02■■■□□ 2.24
SPSB3-208ENST00000566339 CCDC136Q96JN2 1154 aa29.02■■■□□ 2.24
SPSB3-208ENST00000566339 ASXL2Q76L83 1435 aa29.01■■■□□ 2.23
SPSB3-208ENST00000566339 MAST1Q9Y2H9 1570 aa29.01■■■□□ 2.23
SPSB3-208ENST00000566339 ZNF777Q9ULD5 760 aaPredicted RBP29■■■□□ 2.23
SPSB3-208ENST00000566339 NUP155O75694 1391 aa28.99■■■□□ 2.23
SPSB3-208ENST00000566339 PDE3BQ13370 1112 aa28.98■■■□□ 2.23
SPSB3-208ENST00000566339 CCDC141Q6ZP82 1450 aa28.98■■■□□ 2.23
SPSB3-208ENST00000566339 CARD11Q9BXL7 1154 aa28.98■■■□□ 2.23
SPSB3-208ENST00000566339 LAMC1P11047 1609 aa28.97■■■□□ 2.23
SPSB3-208ENST00000566339 ZCCHC11Q5TAX3 1644 aaKnown RBP28.97■■■□□ 2.23
SPSB3-208ENST00000566339 ANP32AP39687 249 aaKnown RBP28.94■■■□□ 2.22
SPSB3-208ENST00000566339 WASHC2CQ9Y4E1 1318 aa28.93■■■□□ 2.22
SPSB3-208ENST00000566339 TSPOAP1O95153 1857 aa28.93■■■□□ 2.22
SPSB3-208ENST00000566339 UNC13BO14795 1591 aa28.92■■■□□ 2.22
SPSB3-208ENST00000566339 RSPH4AQ5TD94 716 aa28.92■■■□□ 2.22
SPSB3-208ENST00000566339 TSPY4P0CV99 314 aa28.9■■■□□ 2.22
SPSB3-208ENST00000566339 TSPY10P0CW01 314 aa28.9■■■□□ 2.22
SPSB3-208ENST00000566339 IPO9Q96P70 1041 aaKnown RBP28.9■■■□□ 2.22
SPSB3-208ENST00000566339 PARD3Q8TEW0 1356 aa28.88■■■□□ 2.21
SPSB3-208ENST00000566339 TRPM1Q7Z4N2 1603 aa28.88■■■□□ 2.21
SPSB3-208ENST00000566339 PLXNC1O60486 1568 aa28.88■■■□□ 2.21
SPSB3-208ENST00000566339 TTC37Q6PGP7 1564 aa28.88■■■□□ 2.21
SPSB3-208ENST00000566339 GPRASP1Q5JY77 1395 aa28.87■■■□□ 2.21
SPSB3-208ENST00000566339 ZNF326Q5BKZ1 582 aaKnown RBP28.87■■■□□ 2.21
SPSB3-208ENST00000566339 NLRP13Q86W25 1043 aa28.86■■■□□ 2.21
SPSB3-208ENST00000566339 FAM135AQ9P2D6 1515 aa28.86■■■□□ 2.21
SPSB3-208ENST00000566339 MYO5CQ9NQX4 1742 aa28.85■■■□□ 2.21
SPSB3-208ENST00000566339 TCERG1O14776 1098 aaKnown RBP28.84■■■□□ 2.21
SPSB3-208ENST00000566339 RRP1P56182 461 aaKnown RBP28.84■■■□□ 2.21
SPSB3-208ENST00000566339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.83■■■□□ 2.21
SPSB3-208ENST00000566339 ST20-MTHFSA0A0A6YYL1 179 aa28.83■■■□□ 2.21
SPSB3-208ENST00000566339 PRAG1Q86YV5 1406 aa28.83■■■□□ 2.2
SPSB3-208ENST00000566339 POLR3GLQ9BT43 218 aa28.82■■■□□ 2.2
SPSB3-208ENST00000566339 SYCP2Q9BX26 1530 aa28.81■■■□□ 2.2
SPSB3-208ENST00000566339 PLEKHH2Q8IVE3 1493 aa28.81■■■□□ 2.2
SPSB3-208ENST00000566339 GLI2P10070 1586 aa28.8■■■□□ 2.2
SPSB3-208ENST00000566339 EIF2AK4Q9P2K8 1649 aaKnown RBP28.8■■■□□ 2.2
SPSB3-208ENST00000566339 MS4A1P11836 297 aa28.8■■■□□ 2.2
SPSB3-208ENST00000566339 WDR7Q9Y4E6 1490 aa28.79■■■□□ 2.2
SPSB3-208ENST00000566339 IQGAP3Q86VI3 1631 aa28.79■■■□□ 2.2
SPSB3-208ENST00000566339 DEKP35659 375 aaKnown RBP28.77■■■□□ 2.2
SPSB3-208ENST00000566339 HNRNPMP52272 730 aaKnown RBP eCLIP28.76■■■□□ 2.19
SPSB3-208ENST00000566339 ZBTB47Q9UFB7 747 aaPredicted RBP28.76■■■□□ 2.19
SPSB3-208ENST00000566339 PRDM15P57071 1507 aaPredicted RBP28.75■■■□□ 2.19
SPSB3-208ENST00000566339 COL17A1Q9UMD9 1497 aaPredicted RBP28.75■■■□□ 2.19
SPSB3-208ENST00000566339 RCAN3Q9UKA8 241 aa28.75■■■□□ 2.19
SPSB3-208ENST00000566339 DCAF11Q8TEB1 546 aa28.75■■■□□ 2.19
SPSB3-208ENST00000566339 MAGI2Q86UL8 1455 aa28.74■■■□□ 2.19
SPSB3-208ENST00000566339 CCDC144AA2RUR9 1427 aa28.74■■■□□ 2.19
SPSB3-208ENST00000566339 ARHGAP5Q13017 1502 aa28.74■■■□□ 2.19
SPSB3-208ENST00000566339 BLMP54132 1417 aaPredicted RBP28.73■■■□□ 2.19
SPSB3-208ENST00000566339 ATP10AO60312 1499 aa28.72■■■□□ 2.19
SPSB3-208ENST00000566339 PPRC1Q5VV67 1664 aaKnown RBP28.7■■■□□ 2.18
SPSB3-208ENST00000566339 MAP3K4Q9Y6R4 1608 aa28.69■■■□□ 2.18
SPSB3-208ENST00000566339 PAK3O75914 559 aaPredicted RBP28.69■■■□□ 2.18
SPSB3-208ENST00000566339 PER1O15534 1290 aaPredicted RBP28.68■■■□□ 2.18
SPSB3-208ENST00000566339 DUOX2Q9NRD8 1548 aa28.66■■■□□ 2.18
SPSB3-208ENST00000566339 PLA2R1Q13018 1463 aa28.66■■■□□ 2.18
SPSB3-208ENST00000566339 KDM2AQ9Y2K7 1162 aa28.65■■■□□ 2.18
SPSB3-208ENST00000566339 RTL5Q5HYW3 569 aaPredicted RBP28.62■■■□□ 2.17
SPSB3-208ENST00000566339 A2MP01023 1474 aa28.62■■■□□ 2.17
SPSB3-208ENST00000566339 ERBINQ96RT1 1412 aa28.61■■■□□ 2.17
SPSB3-208ENST00000566339 USP35Q9P2H5 1018 aa28.6■■■□□ 2.17
SPSB3-208ENST00000566339 ABCC1P33527 1531 aa28.6■■■□□ 2.17
SPSB3-208ENST00000566339 EXOC6Q8TAG9 804 aa28.6■■■□□ 2.17
SPSB3-208ENST00000566339 CD109Q6YHK3 1445 aa28.59■■■□□ 2.17
SPSB3-208ENST00000566339 RNF17Q9BXT8 1623 aaKnown RBP28.59■■■□□ 2.17
SPSB3-208ENST00000566339 PLCH2O75038 1416 aa28.57■■■□□ 2.16
SPSB3-208ENST00000566339 BACH2Q9BYV9 841 aa28.57■■■□□ 2.16
SPSB3-208ENST00000566339 ARAP3Q8WWN8 1544 aa28.56■■■□□ 2.16
SPSB3-208ENST00000566339 TESK2Q96S53 571 aa28.55■■■□□ 2.16
SPSB3-208ENST00000566339 PDE4AP27815 886 aa28.55■■■□□ 2.16
SPSB3-208ENST00000566339 CNGB1Q14028 1251 aaPredicted RBP28.55■■■□□ 2.16
SPSB3-208ENST00000566339 TMF1P82094 1093 aa28.53■■■□□ 2.16
SPSB3-208ENST00000566339 STAC3Q96MF2 364 aa28.53■■■□□ 2.16
SPSB3-208ENST00000566339 NBR1Q14596 966 aa28.5■■■□□ 2.15
SPSB3-208ENST00000566339 DDRGK1Q96HY6 314 aa28.49■■■□□ 2.15
SPSB3-208ENST00000566339 PPM1GO15355 546 aaPredicted RBP28.47■■■□□ 2.15
SPSB3-208ENST00000566339 DISP3Q9P2K9 1392 aa28.47■■■□□ 2.15
SPSB3-208ENST00000566339 ABCA9Q8IUA7 1624 aa28.44■■■□□ 2.14
SPSB3-208ENST00000566339 DEPDC5O75140 1603 aa28.44■■■□□ 2.14
SPSB3-208ENST00000566339 NBPF1Q3BBV0 1214 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms