RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PLXNC1O60486 1568 aa9.92□□□□□ -0.82
TCF4-228ENST00000565393 NCOA1Q15788 1441 aa9.92□□□□□ -0.82
TCF4-228ENST00000565393 ZNF335Q9H4Z2 1342 aaPredicted RBP9.92□□□□□ -0.82
TCF4-228ENST00000565393 CLTCQ00610 1675 aaKnown RBP9.92□□□□□ -0.82
TCF4-228ENST00000565393 CAMSAP1Q5T5Y3 1602 aa9.92□□□□□ -0.82
TCF4-228ENST00000565393 ADGBQ8N7X0 1667 aa9.91□□□□□ -0.82
TCF4-228ENST00000565393 SETD1BQ9UPS6 1966 aaKnown RBP9.9□□□□□ -0.82
TCF4-228ENST00000565393 UBAP1LF5GYI3 381 aa9.9□□□□□ -0.82
TCF4-228ENST00000565393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.89□□□□□ -0.83
TCF4-228ENST00000565393 ARHGEF5Q12774 1597 aa9.89□□□□□ -0.83
TCF4-228ENST00000565393 STRCQ7RTU9 1775 aa9.89□□□□□ -0.83
TCF4-228ENST00000565393 PPARGC1BQ86YN6 1023 aaKnown RBP9.89□□□□□ -0.83
TCF4-228ENST00000565393 STAG3Q9UJ98 1225 aa9.89□□□□□ -0.83
TCF4-228ENST00000565393 ABCC5O15440 1437 aa9.89□□□□□ -0.83
TCF4-228ENST00000565393 KIF15Q9NS87 1388 aa9.88□□□□□ -0.83
TCF4-228ENST00000565393 MROH2AA6NES4 1674 aa9.88□□□□□ -0.83
TCF4-228ENST00000565393 A2ML1A8K2U0 1454 aa9.88□□□□□ -0.83
TCF4-228ENST00000565393 ANKRD30AQ9BXX3 1397 aa9.88□□□□□ -0.83
TCF4-228ENST00000565393 KDM5DQ9BY66 1539 aa9.87□□□□□ -0.83
TCF4-228ENST00000565393 KANK1Q14678 1352 aa9.87□□□□□ -0.83
TCF4-228ENST00000565393 SCAF1Q9H7N4 1312 aaKnown RBP9.86□□□□□ -0.83
TCF4-228ENST00000565393 PZPP20742 1482 aa9.86□□□□□ -0.83
TCF4-228ENST00000565393 ITGAEP38570 1179 aa9.86□□□□□ -0.83
TCF4-228ENST00000565393 FGD6Q6ZV73 1430 aa9.86□□□□□ -0.83
TCF4-228ENST00000565393 TXNDC2Q86VQ3 553 aa9.86□□□□□ -0.83
TCF4-228ENST00000565393 PLA2R1Q13018 1463 aa9.85□□□□□ -0.83
TCF4-228ENST00000565393 CEP170BQ9Y4F5 1589 aaPredicted RBP9.85□□□□□ -0.83
TCF4-228ENST00000565393 DAPK1P53355 1430 aa9.85□□□□□ -0.83
TCF4-228ENST00000565393 PIP4K2BP78356 416 aa9.85□□□□□ -0.83
TCF4-228ENST00000565393 EID1Q9Y6B2 187 aa9.85□□□□□ -0.83
TCF4-228ENST00000565393 DUOX2Q9NRD8 1548 aa9.84□□□□□ -0.83
TCF4-228ENST00000565393 FAM135AQ9P2D6 1515 aa9.84□□□□□ -0.83
TCF4-228ENST00000565393 TOM1O60784 492 aa9.84□□□□□ -0.83
TCF4-228ENST00000565393 TCOF1Q13428 1488 aaKnown RBP9.84□□□□□ -0.83
TCF4-228ENST00000565393 NLRP1Q9C000 1473 aa9.84□□□□□ -0.83
TCF4-228ENST00000565393 LTBP4Q8N2S1 1624 aa9.83□□□□□ -0.84
TCF4-228ENST00000565393 BCANQ96GW7 911 aa9.83□□□□□ -0.84
TCF4-228ENST00000565393 MAST1Q9Y2H9 1570 aa9.83□□□□□ -0.84
TCF4-228ENST00000565393 DNMT1P26358 1616 aaKnown RBP9.82□□□□□ -0.84
TCF4-228ENST00000565393 MYO3AQ8NEV4 1616 aa9.82□□□□□ -0.84
TCF4-228ENST00000565393 IDI1Q13907 227 aa9.82□□□□□ -0.84
TCF4-228ENST00000565393 DISP3Q9P2K9 1392 aa9.82□□□□□ -0.84
TCF4-228ENST00000565393 UGGT1Q9NYU2 1555 aa9.82□□□□□ -0.84
TCF4-228ENST00000565393 PTPN23Q9H3S7 1636 aa9.82□□□□□ -0.84
TCF4-228ENST00000565393 ABCC3O15438 1527 aa9.82□□□□□ -0.84
TCF4-228ENST00000565393 ERBINQ96RT1 1412 aa9.82□□□□□ -0.84
TCF4-228ENST00000565393 LTKP29376 864 aa9.81□□□□□ -0.84
TCF4-228ENST00000565393 NPHP4O75161 1426 aaPredicted RBP9.81□□□□□ -0.84
TCF4-228ENST00000565393 SENP3Q9H4L4 574 aaPredicted RBP9.8□□□□□ -0.84
TCF4-228ENST00000565393 ERVK-7P63135 1459 aa9.79□□□□□ -0.84
TCF4-228ENST00000565393 SHANK2Q9UPX8 1470 aa9.79□□□□□ -0.84
TCF4-228ENST00000565393 CHGAP10645 457 aaKnown RBP9.79□□□□□ -0.84
TCF4-228ENST00000565393 IQSEC2Q5JU85 1478 aa9.79□□□□□ -0.84
TCF4-228ENST00000565393 HDGFP51858 240 aaKnown RBP9.78□□□□□ -0.84
TCF4-228ENST00000565393 SLC52A1Q9NWF4 448 aa9.78□□□□□ -0.84
TCF4-228ENST00000565393 ARHGAP31Q2M1Z3 1444 aa9.78□□□□□ -0.84
TCF4-228ENST00000565393 SLC26A8Q96RN1 970 aa9.77□□□□□ -0.85
TCF4-228ENST00000565393 ZNF142P52746 1687 aaPredicted RBP9.77□□□□□ -0.85
TCF4-228ENST00000565393 ANKRD50Q9ULJ7 1429 aa9.76□□□□□ -0.85
TCF4-228ENST00000565393 RNF17Q9BXT8 1623 aaKnown RBP9.76□□□□□ -0.85
TCF4-228ENST00000565393 EIF2AK4Q9P2K8 1649 aaKnown RBP9.76□□□□□ -0.85
TCF4-228ENST00000565393 HSPA1LP34931 641 aa9.76□□□□□ -0.85
TCF4-228ENST00000565393 SPATA31D1Q6ZQQ2 1576 aa9.75□□□□□ -0.85
TCF4-228ENST00000565393 MED14O60244 1454 aa9.75□□□□□ -0.85
TCF4-228ENST00000565393 PPP1R15AO75807 674 aaPredicted RBP9.75□□□□□ -0.85
TCF4-228ENST00000565393 TMEM2Q9UHN6 1383 aa9.75□□□□□ -0.85
TCF4-228ENST00000565393 ILDR2Q71H61 639 aa9.74□□□□□ -0.85
TCF4-228ENST00000565393 PROSER2Q86WR7 435 aaPredicted RBP9.74□□□□□ -0.85
TCF4-228ENST00000565393 MROH1Q8NDA8 1641 aa9.74□□□□□ -0.85
TCF4-228ENST00000565393 CPS1P31327 1500 aa9.73□□□□□ -0.85
TCF4-228ENST00000565393 RBM33Q96EV2 1170 aaKnown RBP9.73□□□□□ -0.85
TCF4-228ENST00000565393 ZC3H13Q5T200 1668 aaKnown RBP9.73□□□□□ -0.85
TCF4-228ENST00000565393 NUP155O75694 1391 aa9.73□□□□□ -0.85
TCF4-228ENST00000565393 SCAF11Q99590 1463 aaKnown RBP9.72□□□□□ -0.85
TCF4-228ENST00000565393 NEURL4Q96JN8 1562 aa9.72□□□□□ -0.85
TCF4-228ENST00000565393 KCNA6P17658 529 aa9.72□□□□□ -0.85
TCF4-228ENST00000565393 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
TCF4-228ENST00000565393 ADGRL2O95490 1459 aa9.72□□□□□ -0.85
TCF4-228ENST00000565393 PRDM15P57071 1507 aaPredicted RBP9.72□□□□□ -0.85
TCF4-228ENST00000565393 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.86
TCF4-228ENST00000565393 ROCK1Q13464 1354 aa9.71□□□□□ -0.86
TCF4-228ENST00000565393 TRIM52Q96A61 297 aa9.7□□□□□ -0.86
TCF4-228ENST00000565393 LMTK2Q8IWU2 1503 aa9.7□□□□□ -0.86
TCF4-228ENST00000565393 CEP152O94986 1710 aa9.7□□□□□ -0.86
TCF4-228ENST00000565393 DEPDC5O75140 1603 aa9.69□□□□□ -0.86
TCF4-228ENST00000565393 NOS1P29475 1434 aa9.69□□□□□ -0.86
TCF4-228ENST00000565393 VWDEQ8N2E2 1590 aa9.69□□□□□ -0.86
TCF4-228ENST00000565393 LRRC7Q96NW7 1537 aa9.69□□□□□ -0.86
TCF4-228ENST00000565393 ARHGAP23Q9P227 1491 aa9.69□□□□□ -0.86
TCF4-228ENST00000565393 CROCC2H7BZ55 1655 aa9.68□□□□□ -0.86
TCF4-228ENST00000565393 SLIT1O75093 1534 aa9.68□□□□□ -0.86
TCF4-228ENST00000565393 ZNF326Q5BKZ1 582 aaKnown RBP9.68□□□□□ -0.86
TCF4-228ENST00000565393 EFCAB6Q5THR3 1501 aa9.67□□□□□ -0.86
TCF4-228ENST00000565393 SOCS7O14512 581 aa9.67□□□□□ -0.86
TCF4-228ENST00000565393 C14orf37Q86TY3 774 aa9.67□□□□□ -0.86
TCF4-228ENST00000565393 PHF23Q9BUL5 403 aaPredicted RBP9.67□□□□□ -0.86
TCF4-228ENST00000565393 TBX22Q9Y458 520 aa9.67□□□□□ -0.86
TCF4-228ENST00000565393 POLR1AO95602 1720 aaPredicted RBP9.67□□□□□ -0.86
TCF4-228ENST00000565393 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
TCF4-228ENST00000565393 RPRD2Q5VT52 1461 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms