RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 ARHGEF5Q12774 1597 aa20.89■□□□□ 0.93
GTF3C1-205ENST00000564747 MYBBP1AQ9BQG0 1328 aaKnown RBP20.87■□□□□ 0.93
GTF3C1-205ENST00000564747 RGL3Q3MIN7 710 aa20.87■□□□□ 0.93
GTF3C1-205ENST00000564747 FAM135AQ9P2D6 1515 aa20.86■□□□□ 0.93
GTF3C1-205ENST00000564747 CCDC141Q6ZP82 1450 aa20.86■□□□□ 0.93
GTF3C1-205ENST00000564747 LRPPRCP42704 1394 aaKnown RBP20.85■□□□□ 0.93
GTF3C1-205ENST00000564747 RALBP1Q15311 655 aa20.85■□□□□ 0.93
GTF3C1-205ENST00000564747 SAMD9LQ8IVG5 1584 aa20.85■□□□□ 0.93
GTF3C1-205ENST00000564747 CCDC136Q96JN2 1154 aa20.85■□□□□ 0.93
GTF3C1-205ENST00000564747 BRD4O60885 1362 aaPredicted RBP20.85■□□□□ 0.93
GTF3C1-205ENST00000564747 NBPF1Q3BBV0 1214 aa20.84■□□□□ 0.93
GTF3C1-205ENST00000564747 CDC42BPBQ9Y5S2 1711 aa20.84■□□□□ 0.93
GTF3C1-205ENST00000564747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.92
GTF3C1-205ENST00000564747 RSPH4AQ5TD94 716 aa20.82■□□□□ 0.92
GTF3C1-205ENST00000564747 CCDC144AA2RUR9 1427 aa20.82■□□□□ 0.92
GTF3C1-205ENST00000564747 PRAG1Q86YV5 1406 aa20.81■□□□□ 0.92
GTF3C1-205ENST00000564747 KTN1Q86UP2 1357 aaKnown RBP20.81■□□□□ 0.92
GTF3C1-205ENST00000564747 SALL2Q9Y467 1007 aaPredicted RBP20.79■□□□□ 0.92
GTF3C1-205ENST00000564747 PREX2Q70Z35 1606 aa20.79■□□□□ 0.92
GTF3C1-205ENST00000564747 E9PCH4 1651 aa20.79■□□□□ 0.92
GTF3C1-205ENST00000564747 PLA2R1Q13018 1463 aa20.78■□□□□ 0.92
GTF3C1-205ENST00000564747 SYCP2Q9BX26 1530 aa20.77■□□□□ 0.92
GTF3C1-205ENST00000564747 TRPM1Q7Z4N2 1603 aa20.77■□□□□ 0.92
GTF3C1-205ENST00000564747 PER1O15534 1290 aaPredicted RBP20.76■□□□□ 0.91
GTF3C1-205ENST00000564747 NLRP13Q86W25 1043 aa20.76■□□□□ 0.91
GTF3C1-205ENST00000564747 PARD3Q8TEW0 1356 aa20.75■□□□□ 0.91
GTF3C1-205ENST00000564747 ARHGAP5Q13017 1502 aa20.74■□□□□ 0.91
GTF3C1-205ENST00000564747 A2MP01023 1474 aa20.73■□□□□ 0.91
GTF3C1-205ENST00000564747 TTC37Q6PGP7 1564 aa20.72■□□□□ 0.91
GTF3C1-205ENST00000564747 GPRASP1Q5JY77 1395 aa20.71■□□□□ 0.91
GTF3C1-205ENST00000564747 TESK2Q96S53 571 aa20.71■□□□□ 0.91
GTF3C1-205ENST00000564747 PLEKHH2Q8IVE3 1493 aa20.71■□□□□ 0.91
GTF3C1-205ENST00000564747 RRP1P56182 461 aaKnown RBP20.71■□□□□ 0.91
GTF3C1-205ENST00000564747 CC2D1BQ5T0F9 858 aaKnown RBP20.7■□□□□ 0.9
GTF3C1-205ENST00000564747 DISP3Q9P2K9 1392 aa20.7■□□□□ 0.9
GTF3C1-205ENST00000564747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.7■□□□□ 0.9
GTF3C1-205ENST00000564747 UNC13BO14795 1591 aa20.69■□□□□ 0.9
GTF3C1-205ENST00000564747 RCAN3Q9UKA8 241 aa20.69■□□□□ 0.9
GTF3C1-205ENST00000564747 MYT1LQ9UL68 1186 aa20.69■□□□□ 0.9
GTF3C1-205ENST00000564747 EXOC6Q8TAG9 804 aa20.68■□□□□ 0.9
GTF3C1-205ENST00000564747 MAST1Q9Y2H9 1570 aa20.68■□□□□ 0.9
GTF3C1-205ENST00000564747 PANK3Q9H999 370 aa20.68■□□□□ 0.9
GTF3C1-205ENST00000564747 COL17A1Q9UMD9 1497 aaPredicted RBP20.66■□□□□ 0.9
GTF3C1-205ENST00000564747 CDCA7LQ96GN5 454 aa20.66■□□□□ 0.9
GTF3C1-205ENST00000564747 NOP58Q9Y2X3 529 aaKnown RBP20.66■□□□□ 0.9
GTF3C1-205ENST00000564747 PAK3O75914 559 aaPredicted RBP20.66■□□□□ 0.9
GTF3C1-205ENST00000564747 PRDM15P57071 1507 aaPredicted RBP20.65■□□□□ 0.9
GTF3C1-205ENST00000564747 PDE3BQ13370 1112 aa20.64■□□□□ 0.89
GTF3C1-205ENST00000564747 ERBINQ96RT1 1412 aa20.63■□□□□ 0.89
GTF3C1-205ENST00000564747 IQGAP3Q86VI3 1631 aa20.63■□□□□ 0.89
GTF3C1-205ENST00000564747 WASHC2CQ9Y4E1 1318 aa20.63■□□□□ 0.89
GTF3C1-205ENST00000564747 TMF1P82094 1093 aa20.62■□□□□ 0.89
GTF3C1-205ENST00000564747 MYO5CQ9NQX4 1742 aa20.61■□□□□ 0.89
GTF3C1-205ENST00000564747 PLXNC1O60486 1568 aa20.61■□□□□ 0.89
GTF3C1-205ENST00000564747 CHD1O14646 1710 aa20.61■□□□□ 0.89
GTF3C1-205ENST00000564747 LAMC1P11047 1609 aa20.6■□□□□ 0.89
GTF3C1-205ENST00000564747 ERCC6L2Q5T890 1561 aa20.6■□□□□ 0.89
GTF3C1-205ENST00000564747 DUOX2Q9NRD8 1548 aa20.59■□□□□ 0.89
GTF3C1-205ENST00000564747 ANP32AP39687 249 aaKnown RBP20.59■□□□□ 0.89
GTF3C1-205ENST00000564747 ATP10AO60312 1499 aa20.58■□□□□ 0.89
GTF3C1-205ENST00000564747 IPO9Q96P70 1041 aaKnown RBP20.57■□□□□ 0.88
GTF3C1-205ENST00000564747 ABCC2Q92887 1545 aa20.57■□□□□ 0.88
GTF3C1-205ENST00000564747 EIF2AK4Q9P2K8 1649 aaKnown RBP20.56■□□□□ 0.88
GTF3C1-205ENST00000564747 PLIN1O60240 522 aa20.56■□□□□ 0.88
GTF3C1-205ENST00000564747 MAGI2Q86UL8 1455 aa20.55■□□□□ 0.88
GTF3C1-205ENST00000564747 SHROOM2Q13796 1616 aa20.55■□□□□ 0.88
GTF3C1-205ENST00000564747 EFCAB2Q5VUJ9 269 aa20.54■□□□□ 0.88
GTF3C1-205ENST00000564747 BLMP54132 1417 aaPredicted RBP20.54■□□□□ 0.88
GTF3C1-205ENST00000564747 DEKP35659 375 aaKnown RBP20.54■□□□□ 0.88
GTF3C1-205ENST00000564747 NBR1Q14596 966 aa20.54■□□□□ 0.88
GTF3C1-205ENST00000564747 PLCH2O75038 1416 aa20.53■□□□□ 0.88
GTF3C1-205ENST00000564747 ADAMTS8Q9UP79 889 aa20.52■□□□□ 0.88
GTF3C1-205ENST00000564747 TRAPPC8Q9Y2L5 1435 aa20.52■□□□□ 0.88
GTF3C1-205ENST00000564747 INSRP06213 1382 aa20.5■□□□□ 0.87
GTF3C1-205ENST00000564747 TCERG1O14776 1098 aaKnown RBP20.5■□□□□ 0.87
GTF3C1-205ENST00000564747 ZBTB47Q9UFB7 747 aaPredicted RBP20.5■□□□□ 0.87
GTF3C1-205ENST00000564747 KNSTRNQ9Y448 316 aa20.48■□□□□ 0.87
GTF3C1-205ENST00000564747 WDR7Q9Y4E6 1490 aa20.48■□□□□ 0.87
GTF3C1-205ENST00000564747 RNF17Q9BXT8 1623 aaKnown RBP20.48■□□□□ 0.87
GTF3C1-205ENST00000564747 AFAP1Q8N556 730 aa20.48■□□□□ 0.87
GTF3C1-205ENST00000564747 ZMYM4Q5VZL5 1548 aa20.47■□□□□ 0.87
GTF3C1-205ENST00000564747 PDE4AP27815 886 aa20.46■□□□□ 0.87
GTF3C1-205ENST00000564747 NPM2Q86SE8 214 aaKnown RBP20.46■□□□□ 0.87
GTF3C1-205ENST00000564747 PPP2R1AP30153 589 aa20.46■□□□□ 0.87
GTF3C1-205ENST00000564747 CRBNQ96SW2 442 aa20.46■□□□□ 0.87
GTF3C1-205ENST00000564747 SPAG9O60271 1321 aaKnown RBP20.45■□□□□ 0.86
GTF3C1-205ENST00000564747 ABCC1P33527 1531 aa20.45■□□□□ 0.86
GTF3C1-205ENST00000564747 AMER1Q5JTC6 1135 aaPredicted RBP20.45■□□□□ 0.86
GTF3C1-205ENST00000564747 ZCCHC11Q5TAX3 1644 aaKnown RBP20.43■□□□□ 0.86
GTF3C1-205ENST00000564747 MADDQ8WXG6 1647 aa20.43■□□□□ 0.86
GTF3C1-205ENST00000564747 SKAP1Q86WV1 359 aa20.43■□□□□ 0.86
GTF3C1-205ENST00000564747 BACH2Q9BYV9 841 aa20.43■□□□□ 0.86
GTF3C1-205ENST00000564747 C20orf194Q5TEA3 1177 aa20.42■□□□□ 0.86
GTF3C1-205ENST00000564747 WDR43Q15061 677 aaKnown RBP eCLIP20.41■□□□□ 0.86
GTF3C1-205ENST00000564747 MS4A1P11836 297 aa20.4■□□□□ 0.86
GTF3C1-205ENST00000564747 PLEKHH1Q9ULM0 1364 aa20.4■□□□□ 0.86
GTF3C1-205ENST00000564747 IQGAP1P46940 1657 aa20.4■□□□□ 0.86
GTF3C1-205ENST00000564747 TRPM2O94759 1503 aa20.39■□□□□ 0.85
GTF3C1-205ENST00000564747 CDCA8Q53HL2 280 aa20.39■□□□□ 0.85
GTF3C1-205ENST00000564747 SCAF11Q99590 1463 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms