RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 BOLA1Q9Y3E2 137 aa11.64□□□□□ -0.55
TCF4-213ENST00000562543 STRCQ7RTU9 1775 aa11.62□□□□□ -0.55
TCF4-213ENST00000562543 LTBP4Q8N2S1 1624 aa11.62□□□□□ -0.55
TCF4-213ENST00000562543 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
TCF4-213ENST00000562543 POTEB3A0JP26 581 aa11.6□□□□□ -0.55
TCF4-213ENST00000562543 POTEBQ6S5H4 581 aa11.6□□□□□ -0.55
TCF4-213ENST00000562543 G3V3G9 751 aa11.59□□□□□ -0.55
TCF4-213ENST00000562543 EMP3P54852 163 aa11.59□□□□□ -0.55
TCF4-213ENST00000562543 MAGI3Q5TCQ9 1506 aa11.58□□□□□ -0.56
TCF4-213ENST00000562543 YEATS2Q9ULM3 1422 aa11.58□□□□□ -0.56
TCF4-213ENST00000562543 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
TCF4-213ENST00000562543 FAM205CA6NFA0 338 aa11.56□□□□□ -0.56
TCF4-213ENST00000562543 CFAP43Q8NDM7 1665 aa11.55□□□□□ -0.56
TCF4-213ENST00000562543 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
TCF4-213ENST00000562543 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
TCF4-213ENST00000562543 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
TCF4-213ENST00000562543 UHRF1BP1LA0JNW5 1464 aa11.55□□□□□ -0.56
TCF4-213ENST00000562543 RIOK3O14730 519 aaKnown RBP11.54□□□□□ -0.56
TCF4-213ENST00000562543 HOXB3P14651 431 aaPredicted RBP11.54□□□□□ -0.56
TCF4-213ENST00000562543 PREX1Q8TCU6 1659 aa11.53□□□□□ -0.56
TCF4-213ENST00000562543 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
TCF4-213ENST00000562543 PTPRGP23470 1445 aa11.52□□□□□ -0.56
TCF4-213ENST00000562543 ARAP3Q8WWN8 1544 aa11.51□□□□□ -0.57
TCF4-213ENST00000562543 KDM5BQ9UGL1 1544 aa11.51□□□□□ -0.57
TCF4-213ENST00000562543 MMRN1Q13201 1228 aa11.51□□□□□ -0.57
TCF4-213ENST00000562543 PTPRTO14522 1441 aa11.51□□□□□ -0.57
TCF4-213ENST00000562543 SRCAPQ6ZRS2 3230 aa11.5□□□□□ -0.57
TCF4-213ENST00000562543 ZCCHC11Q5TAX3 1644 aaKnown RBP11.5□□□□□ -0.57
TCF4-213ENST00000562543 TMEM92Q6UXU6 159 aa11.5□□□□□ -0.57
TCF4-213ENST00000562543 MS4A4AQ96JQ5 239 aa11.5□□□□□ -0.57
TCF4-213ENST00000562543 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
TCF4-213ENST00000562543 CD109Q6YHK3 1445 aa11.47□□□□□ -0.57
TCF4-213ENST00000562543 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
TCF4-213ENST00000562543 KRTAP3-3Q9BYR6 98 aa11.47□□□□□ -0.57
TCF4-213ENST00000562543 KRTAP3-2Q9BYR7 98 aa11.47□□□□□ -0.57
TCF4-213ENST00000562543 VGFO15240 615 aaPredicted RBP11.46□□□□□ -0.57
TCF4-213ENST00000562543 TTC37Q6PGP7 1564 aa11.45□□□□□ -0.58
TCF4-213ENST00000562543 WDR7Q9Y4E6 1490 aa11.45□□□□□ -0.58
TCF4-213ENST00000562543 UBAP1LF5GYI3 381 aa11.45□□□□□ -0.58
TCF4-213ENST00000562543 ZNF710Q8N1W2 664 aa11.45□□□□□ -0.58
TCF4-213ENST00000562543 SOX12O15370 315 aa11.44□□□□□ -0.58
TCF4-213ENST00000562543 UACAQ9BZF9 1416 aa11.43□□□□□ -0.58
TCF4-213ENST00000562543 TNIKQ9UKE5 1360 aa11.43□□□□□ -0.58
TCF4-213ENST00000562543 ARID4BQ4LE39 1312 aaPredicted RBP11.42□□□□□ -0.58
TCF4-213ENST00000562543 HSPA1LP34931 641 aa11.42□□□□□ -0.58
TCF4-213ENST00000562543 FRMPD1Q5SYB0 1578 aa11.41□□□□□ -0.58
TCF4-213ENST00000562543 FER1L4A9Z1Z3 1794 aa11.41□□□□□ -0.58
TCF4-213ENST00000562543 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
TCF4-213ENST00000562543 HOXB1P14653 301 aaPredicted RBP11.41□□□□□ -0.58
TCF4-213ENST00000562543 DOK7Q18PE1 504 aa11.4□□□□□ -0.58
TCF4-213ENST00000562543 BCL11BQ9C0K0 894 aaPredicted RBP11.4□□□□□ -0.58
TCF4-213ENST00000562543 WRNQ14191 1432 aaPredicted RBP eCLIP11.38□□□□□ -0.59
TCF4-213ENST00000562543 ERBB3P21860 1342 aa11.37□□□□□ -0.59
TCF4-213ENST00000562543 TTBK1Q5TCY1 1321 aaPredicted RBP11.37□□□□□ -0.59
TCF4-213ENST00000562543 SIGLEC1Q9BZZ2 1709 aa11.37□□□□□ -0.59
TCF4-213ENST00000562543 STK24Q9Y6E0 443 aa11.36□□□□□ -0.59
TCF4-213ENST00000562543 FBXO22Q8NEZ5 403 aa11.34□□□□□ -0.59
TCF4-213ENST00000562543 RGS17Q9UGC6 210 aaPredicted RBP11.34□□□□□ -0.59
TCF4-213ENST00000562543 SETD1AO15047 1707 aaKnown RBP11.34□□□□□ -0.59
TCF4-213ENST00000562543 CARMIL2Q6F5E8 1435 aa11.34□□□□□ -0.59
TCF4-213ENST00000562543 VARS2Q5ST30 1063 aaKnown RBP11.33□□□□□ -0.6
TCF4-213ENST00000562543 UHRF1BP1Q6BDS2 1440 aa11.33□□□□□ -0.6
TCF4-213ENST00000562543 POGZQ7Z3K3 1410 aa11.33□□□□□ -0.6
TCF4-213ENST00000562543 FANCAO15360 1455 aa11.32□□□□□ -0.6
TCF4-213ENST00000562543 ECM2O94769 699 aaPredicted RBP11.32□□□□□ -0.6
TCF4-213ENST00000562543 RAPGEF3O95398 923 aa11.32□□□□□ -0.6
TCF4-213ENST00000562543 NLRP6P59044 892 aa11.32□□□□□ -0.6
TCF4-213ENST00000562543 MFRPQ9BY79 579 aa11.32□□□□□ -0.6
TCF4-213ENST00000562543 PHLDB1Q86UU1 1377 aa11.31□□□□□ -0.6
TCF4-213ENST00000562543 STK25O00506 426 aa11.31□□□□□ -0.6
TCF4-213ENST00000562543 RIMBP2O15034 1052 aa11.31□□□□□ -0.6
TCF4-213ENST00000562543 GPR153Q6NV75 609 aa11.3□□□□□ -0.6
TCF4-213ENST00000562543 SETD1BQ9UPS6 1966 aaKnown RBP11.29□□□□□ -0.6
TCF4-213ENST00000562543 RGL2O15211 777 aa11.29□□□□□ -0.6
TCF4-213ENST00000562543 PKD2Q13563 968 aa11.29□□□□□ -0.6
TCF4-213ENST00000562543 KHSRPQ92945 711 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■■□□ 17.1
TCF4-213ENST00000562543 NCOA1Q15788 1441 aa11.28□□□□□ -0.6
TCF4-213ENST00000562543 ARSIQ5FYB1 569 aa11.28□□□□□ -0.6
TCF4-213ENST00000562543 BIVM-ERCC5R4GMW8 1640 aa11.27□□□□□ -0.6
TCF4-213ENST00000562543 ARHGEF12Q9NZN5 1544 aa11.27□□□□□ -0.61
TCF4-213ENST00000562543 ZNF335Q9H4Z2 1342 aaPredicted RBP11.26□□□□□ -0.61
TCF4-213ENST00000562543 DISP1Q96F81 1524 aa11.25□□□□□ -0.61
TCF4-213ENST00000562543 KIAA0556O60303 1618 aa11.25□□□□□ -0.61
TCF4-213ENST00000562543 NEO1Q92859 1461 aa11.25□□□□□ -0.61
TCF4-213ENST00000562543 RICTORQ6R327 1708 aa11.24□□□□□ -0.61
TCF4-213ENST00000562543 TAOK2Q9UL54 1235 aa11.24□□□□□ -0.61
TCF4-213ENST00000562543 PIP4K2BP78356 416 aa11.23□□□□□ -0.61
TCF4-213ENST00000562543 KCNH8Q96L42 1107 aa11.23□□□□□ -0.61
TCF4-213ENST00000562543 ZSWIM6Q9HCJ5 1215 aa11.23□□□□□ -0.61
TCF4-213ENST00000562543 AKNAQ7Z591 1439 aa11.22□□□□□ -0.61
TCF4-213ENST00000562543 ABCA9Q8IUA7 1624 aa11.22□□□□□ -0.61
TCF4-213ENST00000562543 C2orf72A6NCS6 295 aa11.21□□□□□ -0.61
TCF4-213ENST00000562543 POTEAQ6S8J7 498 aa11.21□□□□□ -0.61
TCF4-213ENST00000562543 ALKQ9UM73 1620 aa11.2□□□□□ -0.62
TCF4-213ENST00000562543 IQGAP2Q13576 1575 aa11.2□□□□□ -0.62
TCF4-213ENST00000562543 CEBPAP49715 358 aaPredicted RBP11.2□□□□□ -0.62
TCF4-213ENST00000562543 ZMYM4Q5VZL5 1548 aa11.19□□□□□ -0.62
TCF4-213ENST00000562543 ZNF687Q8N1G0 1237 aa11.19□□□□□ -0.62
TCF4-213ENST00000562543 ZFYVE16Q7Z3T8 1539 aa11.18□□□□□ -0.62
TCF4-213ENST00000562543 KIF3CO14782 793 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms