RNA–Protein interactions for RNA: ENST00000562523.1

NIP7-204, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-204ENST00000562523 RABGEF1Q9UJ41 708 aa9.88□□□□□ -0.83
NIP7-204ENST00000562523 DPYSL4O14531 572 aa9.87□□□□□ -0.83
NIP7-204ENST00000562523 ANKK1Q8NFD2 765 aa9.86□□□□□ -0.83
NIP7-204ENST00000562523 CAMK2BQ13554 666 aa9.85□□□□□ -0.83
NIP7-204ENST00000562523 BBXQ8WY36 941 aaPredicted RBP9.85□□□□□ -0.83
NIP7-204ENST00000562523 EPAS1Q99814 870 aa9.85□□□□□ -0.83
NIP7-204ENST00000562523 C6orf132Q5T0Z8 1188 aa9.84□□□□□ -0.83
NIP7-204ENST00000562523 RBM33Q96EV2 1170 aaKnown RBP9.84□□□□□ -0.83
NIP7-204ENST00000562523 KIAA1468Q9P260 1216 aa9.84□□□□□ -0.83
NIP7-204ENST00000562523 DDX12PQ92771 950 aa9.83□□□□□ -0.84
NIP7-204ENST00000562523 IFFO2Q5TF58 517 aa9.81□□□□□ -0.84
NIP7-204ENST00000562523 BCAMP50895 628 aa9.8□□□□□ -0.84
NIP7-204ENST00000562523 LAPTM4BQ86VI4 370 aa9.8□□□□□ -0.84
NIP7-204ENST00000562523 SPRYD3Q8NCJ5 442 aa9.79□□□□□ -0.84
NIP7-204ENST00000562523 ZFRQ96KR1 1074 aaKnown RBP9.79□□□□□ -0.84
NIP7-204ENST00000562523 SEPT9Q9UHD8 586 aaPredicted RBP9.79□□□□□ -0.84
NIP7-204ENST00000562523 A0A0G2JS52 829 aa9.77□□□□□ -0.85
NIP7-204ENST00000562523 SOWAHBA6NEL2 793 aa9.77□□□□□ -0.85
NIP7-204ENST00000562523 ONECUT3O60422 494 aaPredicted RBP9.77□□□□□ -0.85
NIP7-204ENST00000562523 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
NIP7-204ENST00000562523 CCDC180Q9P1Z9 1646 aa9.77□□□□□ -0.85
NIP7-204ENST00000562523 RGS20O76081 388 aa9.76□□□□□ -0.85
NIP7-204ENST00000562523 TRIM6-TRIM34B2RNG4 842 aa9.75□□□□□ -0.85
NIP7-204ENST00000562523 NBR1Q14596 966 aa9.75□□□□□ -0.85
NIP7-204ENST00000562523 MAP3K7O43318 606 aa9.74□□□□□ -0.85
NIP7-204ENST00000562523 PACS2Q86VP3 889 aa9.73□□□□□ -0.85
NIP7-204ENST00000562523 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
NIP7-204ENST00000562523 FAM98CQ17RN3 349 aaKnown RBP9.72□□□□□ -0.85
NIP7-204ENST00000562523 WDR70Q9NW82 654 aa9.72□□□□□ -0.85
NIP7-204ENST00000562523 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
NIP7-204ENST00000562523 EN1Q05925 392 aaPredicted RBP9.71□□□□□ -0.86
NIP7-204ENST00000562523 PDIA6Q15084 440 aa9.71□□□□□ -0.86
NIP7-204ENST00000562523 TSR1Q2NL82 804 aaKnown RBP9.71□□□□□ -0.86
NIP7-204ENST00000562523 NYAP1Q6ZVC0 841 aa9.71□□□□□ -0.86
NIP7-204ENST00000562523 LRCH3Q96II8 777 aa9.71□□□□□ -0.86
NIP7-204ENST00000562523 CFAP44Q96MT7 982 aa9.71□□□□□ -0.86
NIP7-204ENST00000562523 IRX2Q9BZI1 471 aaPredicted RBP9.71□□□□□ -0.86
NIP7-204ENST00000562523 ITGBL1O95965 494 aaPredicted RBP9.7□□□□□ -0.86
NIP7-204ENST00000562523 E2F4Q16254 413 aa9.7□□□□□ -0.86
NIP7-204ENST00000562523 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.7□□□□□ -0.86
NIP7-204ENST00000562523 HPS5Q9UPZ3 1129 aa9.69□□□□□ -0.86
NIP7-204ENST00000562523 GRXCR2A6NFK2 248 aa9.68□□□□□ -0.86
NIP7-204ENST00000562523 KCNC4Q03721 635 aa9.68□□□□□ -0.86
NIP7-204ENST00000562523 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
NIP7-204ENST00000562523 TSR3Q9UJK0 312 aaKnown RBP9.68□□□□□ -0.86
NIP7-204ENST00000562523 TSKSQ9UJT2 592 aa9.67□□□□□ -0.86
NIP7-204ENST00000562523 CDCA7LQ96GN5 454 aa9.65□□□□□ -0.86
NIP7-204ENST00000562523 SMAPO00193 183 aa9.64□□□□□ -0.87
NIP7-204ENST00000562523 PRSS12P56730 875 aa9.64□□□□□ -0.87
NIP7-204ENST00000562523 PPP4CP60510 307 aa9.64□□□□□ -0.87
NIP7-204ENST00000562523 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
NIP7-204ENST00000562523 SAMD7Q7Z3H4 446 aa9.61□□□□□ -0.87
NIP7-204ENST00000562523 CERKQ8TCT0 537 aa9.61□□□□□ -0.87
NIP7-204ENST00000562523 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
NIP7-204ENST00000562523 PNMA3Q9UL41 463 aa9.6□□□□□ -0.87
NIP7-204ENST00000562523 HDGFP51858 240 aaKnown RBP9.59□□□□□ -0.87
NIP7-204ENST00000562523 TATDN2Q93075 761 aa9.59□□□□□ -0.87
NIP7-204ENST00000562523 RTN4Q9NQC3 1192 aaKnown RBP9.59□□□□□ -0.87
NIP7-204ENST00000562523 FAM198AQ9UFP1 575 aa9.59□□□□□ -0.87
NIP7-204ENST00000562523 NBPF26B4DH59 902 aa9.58□□□□□ -0.88
NIP7-204ENST00000562523 ARIH1Q9Y4X5 557 aaPredicted RBP9.58□□□□□ -0.88
NIP7-204ENST00000562523 RNF40O75150 1001 aa9.57□□□□□ -0.88
NIP7-204ENST00000562523 OSBPP22059 807 aa9.56□□□□□ -0.88
NIP7-204ENST00000562523 C3orf80F5H4A9 247 aa9.55□□□□□ -0.88
NIP7-204ENST00000562523 NUDT18Q6ZVK8 323 aa9.55□□□□□ -0.88
NIP7-204ENST00000562523 CDHR5Q9HBB8 845 aa9.55□□□□□ -0.88
NIP7-204ENST00000562523 Q6ZNB5 142 aa9.53□□□□□ -0.88
NIP7-204ENST00000562523 TJAP1Q5JTD0 557 aa9.52□□□□□ -0.89
NIP7-204ENST00000562523 MTRQ99707 1265 aa9.5□□□□□ -0.89
NIP7-204ENST00000562523 IL21Q9HBE4 155 aa9.5□□□□□ -0.89
NIP7-204ENST00000562523 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
NIP7-204ENST00000562523 PADI6Q6TGC4 694 aa9.48□□□□□ -0.89
NIP7-204ENST00000562523 APLP1P51693 650 aa9.46□□□□□ -0.9
NIP7-204ENST00000562523 SWT1Q5T5J6 900 aaKnown RBP9.46□□□□□ -0.9
NIP7-204ENST00000562523 ZNF516Q92618 1163 aa9.46□□□□□ -0.9
NIP7-204ENST00000562523 NPDC1Q9NQX5 325 aaPredicted RBP9.46□□□□□ -0.9
NIP7-204ENST00000562523 GFRA3O60609 400 aa9.45□□□□□ -0.9
NIP7-204ENST00000562523 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
NIP7-204ENST00000562523 PPP1R18Q6NYC8 613 aa9.45□□□□□ -0.9
NIP7-204ENST00000562523 NECTIN2Q92692 538 aa9.45□□□□□ -0.9
NIP7-204ENST00000562523 PRKD2Q9BZL6 878 aa9.45□□□□□ -0.9
NIP7-204ENST00000562523 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
NIP7-204ENST00000562523 SLF2Q8IX21 1173 aa9.44□□□□□ -0.9
NIP7-204ENST00000562523 TTC13Q8NBP0 860 aa9.43□□□□□ -0.9
NIP7-204ENST00000562523 COPS2P61201 443 aa9.42□□□□□ -0.9
NIP7-204ENST00000562523 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.42□□□□□ -0.9
NIP7-204ENST00000562523 TSHZ2Q9NRE2 1034 aa9.42□□□□□ -0.9
NIP7-204ENST00000562523 MLLT3P42568 568 aaPredicted RBP9.41□□□□□ -0.9
NIP7-204ENST00000562523 NKX2-3Q8TAU0 364 aa9.41□□□□□ -0.9
NIP7-204ENST00000562523 ARHGEF1Q92888 912 aaKnown RBP9.41□□□□□ -0.9
NIP7-204ENST00000562523 EYA1Q99502 592 aa9.39□□□□□ -0.91
NIP7-204ENST00000562523 RB1CC1Q8TDY2 1594 aa9.38□□□□□ -0.91
NIP7-204ENST00000562523 GGCXP38435 758 aa9.38□□□□□ -0.91
NIP7-204ENST00000562523 V9GY48 417 aaPredicted RBP9.37□□□□□ -0.91
NIP7-204ENST00000562523 TRAF7Q6Q0C0 670 aa9.36□□□□□ -0.91
NIP7-204ENST00000562523 KCNV2Q8TDN2 545 aa9.36□□□□□ -0.91
NIP7-204ENST00000562523 NUTM2FA1L443 756 aa9.35□□□□□ -0.91
NIP7-204ENST00000562523 PRR14Q9BWN1 585 aa9.35□□□□□ -0.91
NIP7-204ENST00000562523 ZPR1O75312 459 aa9.34□□□□□ -0.91
NIP7-204ENST00000562523 PTGDRQ13258 359 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms