RNA–Protein interactions for RNA: ENST00000561308.5

LINS1-214, Transcript of lines homolog 1, humanhuman

TSL 1 (best) BASIC

Gene LINS1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-214ENST00000561308 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
LINS1-214ENST00000561308 CFAP44Q96MT7 982 aa12.04□□□□□ -0.48
LINS1-214ENST00000561308 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
LINS1-214ENST00000561308 EPAS1Q99814 870 aa12.04□□□□□ -0.48
LINS1-214ENST00000561308 COL9A1P20849 921 aa12.03□□□□□ -0.48
LINS1-214ENST00000561308 PTPN5P54829 565 aa12.03□□□□□ -0.48
LINS1-214ENST00000561308 WNT2BQ93097 391 aa12.01□□□□□ -0.49
LINS1-214ENST00000561308 PROX2Q3B8N5 592 aa12□□□□□ -0.49
LINS1-214ENST00000561308 THSD4Q6ZMP0 1018 aa12□□□□□ -0.49
LINS1-214ENST00000561308 RABGEF1Q9UJ41 708 aa12□□□□□ -0.49
LINS1-214ENST00000561308 DDX12PQ92771 950 aa11.99□□□□□ -0.49
LINS1-214ENST00000561308 C6orf132Q5T0Z8 1188 aa11.98□□□□□ -0.49
LINS1-214ENST00000561308 RBM33Q96EV2 1170 aaKnown RBP11.97□□□□□ -0.49
LINS1-214ENST00000561308 PDIA6Q15084 440 aa11.96□□□□□ -0.5
LINS1-214ENST00000561308 E2F4Q16254 413 aa11.96□□□□□ -0.5
LINS1-214ENST00000561308 WDR70Q9NW82 654 aa11.96□□□□□ -0.5
LINS1-214ENST00000561308 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
LINS1-214ENST00000561308 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
LINS1-214ENST00000561308 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
LINS1-214ENST00000561308 NBR1Q14596 966 aa11.92□□□□□ -0.5
LINS1-214ENST00000561308 LAPTM4BQ86VI4 370 aa11.9□□□□□ -0.5
LINS1-214ENST00000561308 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
LINS1-214ENST00000561308 EN1Q05925 392 aaPredicted RBP11.89□□□□□ -0.51
LINS1-214ENST00000561308 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
LINS1-214ENST00000561308 MAP3K7O43318 606 aa11.89□□□□□ -0.51
LINS1-214ENST00000561308 ARIH1Q9Y4X5 557 aaPredicted RBP11.89□□□□□ -0.51
LINS1-214ENST00000561308 TSR1Q2NL82 804 aaKnown RBP11.86□□□□□ -0.51
LINS1-214ENST00000561308 ZFRQ96KR1 1074 aaKnown RBP11.86□□□□□ -0.51
LINS1-214ENST00000561308 SEPT9Q9UHD8 586 aaPredicted RBP11.86□□□□□ -0.51
LINS1-214ENST00000561308 BCAMP50895 628 aa11.84□□□□□ -0.51
LINS1-214ENST00000561308 GRXCR2A6NFK2 248 aa11.83□□□□□ -0.52
LINS1-214ENST00000561308 SOWAHBA6NEL2 793 aa11.82□□□□□ -0.52
LINS1-214ENST00000561308 IFFO2Q5TF58 517 aa11.82□□□□□ -0.52
LINS1-214ENST00000561308 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
LINS1-214ENST00000561308 PACS2Q86VP3 889 aa11.81□□□□□ -0.52
LINS1-214ENST00000561308 TSKSQ9UJT2 592 aa11.8□□□□□ -0.52
LINS1-214ENST00000561308 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
LINS1-214ENST00000561308 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
LINS1-214ENST00000561308 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
LINS1-214ENST00000561308 OSBPP22059 807 aa11.75□□□□□ -0.53
LINS1-214ENST00000561308 PRSS12P56730 875 aa11.75□□□□□ -0.53
LINS1-214ENST00000561308 NYAP1Q6ZVC0 841 aa11.75□□□□□ -0.53
LINS1-214ENST00000561308 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
LINS1-214ENST00000561308 WBP1LQ9NX94 342 aa11.75□□□□□ -0.53
LINS1-214ENST00000561308 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.75□□□□□ -0.53
LINS1-214ENST00000561308 LRCH3Q96II8 777 aa11.75□□□□□ -0.53
LINS1-214ENST00000561308 A0A0G2JS52 829 aa11.73□□□□□ -0.53
LINS1-214ENST00000561308 TSR3Q9UJK0 312 aaKnown RBP11.72□□□□□ -0.53
LINS1-214ENST00000561308 ITGBL1O95965 494 aaPredicted RBP11.71□□□□□ -0.53
LINS1-214ENST00000561308 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.53
LINS1-214ENST00000561308 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
LINS1-214ENST00000561308 RGS20O76081 388 aa11.71□□□□□ -0.54
LINS1-214ENST00000561308 CDHR5Q9HBB8 845 aa11.71□□□□□ -0.54
LINS1-214ENST00000561308 SMAPO00193 183 aa11.7□□□□□ -0.54
LINS1-214ENST00000561308 NBPF26B4DH59 902 aa11.68□□□□□ -0.54
LINS1-214ENST00000561308 TATDN2Q93075 761 aa11.68□□□□□ -0.54
LINS1-214ENST00000561308 ARHGEF1Q92888 912 aaKnown RBP11.67□□□□□ -0.54
LINS1-214ENST00000561308 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
LINS1-214ENST00000561308 RBM27Q9P2N5 1060 aaKnown RBP11.66□□□□□ -0.54
LINS1-214ENST00000561308 C3orf80F5H4A9 247 aa11.65□□□□□ -0.54
LINS1-214ENST00000561308 PPP4CP60510 307 aa11.65□□□□□ -0.54
LINS1-214ENST00000561308 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
LINS1-214ENST00000561308 KCNC4Q03721 635 aa11.64□□□□□ -0.55
LINS1-214ENST00000561308 KCNV2Q8TDN2 545 aa11.64□□□□□ -0.55
LINS1-214ENST00000561308 NUDT18Q6ZVK8 323 aa11.63□□□□□ -0.55
LINS1-214ENST00000561308 NPDC1Q9NQX5 325 aaPredicted RBP11.62□□□□□ -0.55
LINS1-214ENST00000561308 MLLT3P42568 568 aaPredicted RBP11.6□□□□□ -0.55
LINS1-214ENST00000561308 HDGFP51858 240 aaKnown RBP11.6□□□□□ -0.55
LINS1-214ENST00000561308 PADI6Q6TGC4 694 aa11.6□□□□□ -0.55
LINS1-214ENST00000561308 TTC13Q8NBP0 860 aa11.6□□□□□ -0.55
LINS1-214ENST00000561308 RNF40O75150 1001 aa11.56□□□□□ -0.56
LINS1-214ENST00000561308 IRX2Q9BZI1 471 aaPredicted RBP11.54□□□□□ -0.56
LINS1-214ENST00000561308 P3H3Q8IVL6 736 aa11.53□□□□□ -0.56
LINS1-214ENST00000561308 TJAP1Q5JTD0 557 aa11.52□□□□□ -0.57
LINS1-214ENST00000561308 SWT1Q5T5J6 900 aaKnown RBP11.51□□□□□ -0.57
LINS1-214ENST00000561308 MTRQ99707 1265 aa11.5□□□□□ -0.57
LINS1-214ENST00000561308 PTGDRQ13258 359 aa11.49□□□□□ -0.57
LINS1-214ENST00000561308 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
LINS1-214ENST00000561308 EYA1Q99502 592 aa11.49□□□□□ -0.57
LINS1-214ENST00000561308 SLF2Q8IX21 1173 aa11.49□□□□□ -0.57
LINS1-214ENST00000561308 IL21Q9HBE4 155 aa11.49□□□□□ -0.57
LINS1-214ENST00000561308 APLP1P51693 650 aa11.48□□□□□ -0.57
LINS1-214ENST00000561308 NUTM2FA1L443 756 aa11.47□□□□□ -0.57
LINS1-214ENST00000561308 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
LINS1-214ENST00000561308 PLCB2Q00722 1185 aa11.46□□□□□ -0.58
LINS1-214ENST00000561308 SEMA3EO15041 775 aa11.45□□□□□ -0.58
LINS1-214ENST00000561308 RBM46Q8TBY0 533 aaKnown RBP11.42□□□□□ -0.58
LINS1-214ENST00000561308 ZNF516Q92618 1163 aa11.42□□□□□ -0.58
LINS1-214ENST00000561308 ADGRG1Q9Y653 693 aa11.42□□□□□ -0.58
LINS1-214ENST00000561308 DNAJB2P25686 324 aa11.41□□□□□ -0.58
LINS1-214ENST00000561308 FCHSD2O94868 740 aa11.4□□□□□ -0.58
LINS1-214ENST00000561308 COPS2P61201 443 aa11.38□□□□□ -0.59
LINS1-214ENST00000561308 PPP1R18Q6NYC8 613 aa11.38□□□□□ -0.59
LINS1-214ENST00000561308 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
LINS1-214ENST00000561308 PRR14Q9BWN1 585 aa11.38□□□□□ -0.59
LINS1-214ENST00000561308 TMEM134Q9H6X4 195 aa11.37□□□□□ -0.59
LINS1-214ENST00000561308 RCCD1A6NED2 376 aa11.35□□□□□ -0.59
LINS1-214ENST00000561308 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
LINS1-214ENST00000561308 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.35□□□□□ -0.59
LINS1-214ENST00000561308 TESPA1A2RU30 521 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms