RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 PDE4AP27815 886 aa11.34□□□□□ -0.59
AP4E1-204ENST00000561004 PROX2Q3B8N5 592 aa11.34□□□□□ -0.59
AP4E1-204ENST00000561004 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
AP4E1-204ENST00000561004 V9GY48 417 aaPredicted RBP11.34□□□□□ -0.59
AP4E1-204ENST00000561004 MAP3K9P80192 1104 aa11.33□□□□□ -0.6
AP4E1-204ENST00000561004 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
AP4E1-204ENST00000561004 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
AP4E1-204ENST00000561004 LRCH3Q96II8 777 aa11.31□□□□□ -0.6
AP4E1-204ENST00000561004 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.31□□□□□ -0.6
AP4E1-204ENST00000561004 FAM98CQ17RN3 349 aaKnown RBP11.29□□□□□ -0.6
AP4E1-204ENST00000561004 TYW1BQ6NUM6 668 aa11.28□□□□□ -0.6
AP4E1-204ENST00000561004 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
AP4E1-204ENST00000561004 HS6ST3Q8IZP7 471 aa11.27□□□□□ -0.61
AP4E1-204ENST00000561004 PCDHGA10Q9Y5H3 936 aa11.27□□□□□ -0.61
AP4E1-204ENST00000561004 COL9A1P20849 921 aa11.26□□□□□ -0.61
AP4E1-204ENST00000561004 ZNF775Q96BV0 537 aaPredicted RBP11.26□□□□□ -0.61
AP4E1-204ENST00000561004 PHF14O94880 888 aa11.25□□□□□ -0.61
AP4E1-204ENST00000561004 PKD2Q13563 968 aa11.24□□□□□ -0.61
AP4E1-204ENST00000561004 PPP4CP60510 307 aa11.23□□□□□ -0.61
AP4E1-204ENST00000561004 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
AP4E1-204ENST00000561004 SEPT9Q9UHD8 586 aaPredicted RBP11.21□□□□□ -0.61
AP4E1-204ENST00000561004 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
AP4E1-204ENST00000561004 DDX27Q96GQ7 796 aaKnown RBP11.19□□□□□ -0.62
AP4E1-204ENST00000561004 EPAS1Q99814 870 aa11.19□□□□□ -0.62
AP4E1-204ENST00000561004 IL21Q9HBE4 155 aa11.18□□□□□ -0.62
AP4E1-204ENST00000561004 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
AP4E1-204ENST00000561004 GGCXP38435 758 aa11.16□□□□□ -0.62
AP4E1-204ENST00000561004 TJAP1Q5JTD0 557 aa11.16□□□□□ -0.62
AP4E1-204ENST00000561004 C6orf132Q5T0Z8 1188 aa11.16□□□□□ -0.62
AP4E1-204ENST00000561004 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
AP4E1-204ENST00000561004 NCKAP5LQ9HCH0 1330 aa11.15□□□□□ -0.62
AP4E1-204ENST00000561004 PACS2Q86VP3 889 aa11.15□□□□□ -0.62
AP4E1-204ENST00000561004 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
AP4E1-204ENST00000561004 DNAJC5Q9H3Z4 198 aa11.12□□□□□ -0.63
AP4E1-204ENST00000561004 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
AP4E1-204ENST00000561004 MTRQ99707 1265 aa11.09□□□□□ -0.63
AP4E1-204ENST00000561004 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
AP4E1-204ENST00000561004 TMUB1Q9BVT8 246 aa11.07□□□□□ -0.64
AP4E1-204ENST00000561004 MFSD10Q14728 455 aa11.06□□□□□ -0.64
AP4E1-204ENST00000561004 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
AP4E1-204ENST00000561004 PKDCCQ504Y2 493 aa11.05□□□□□ -0.64
AP4E1-204ENST00000561004 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
AP4E1-204ENST00000561004 DGAT1O75907 488 aa11.03□□□□□ -0.64
AP4E1-204ENST00000561004 SAMD7Q7Z3H4 446 aa11□□□□□ -0.65
AP4E1-204ENST00000561004 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
AP4E1-204ENST00000561004 TREML4Q6UXN2 200 aa10.98□□□□□ -0.65
AP4E1-204ENST00000561004 RBM33Q96EV2 1170 aaKnown RBP10.98□□□□□ -0.65
AP4E1-204ENST00000561004 MYT1Q01538 1121 aa10.96□□□□□ -0.65
AP4E1-204ENST00000561004 ZNF516Q92618 1163 aa10.96□□□□□ -0.65
AP4E1-204ENST00000561004 CERKQ8TCT0 537 aa10.95□□□□□ -0.66
AP4E1-204ENST00000561004 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
AP4E1-204ENST00000561004 NBPF26B4DH59 902 aa10.92□□□□□ -0.66
AP4E1-204ENST00000561004 SLC19A1P41440 591 aa10.92□□□□□ -0.66
AP4E1-204ENST00000561004 PRR20EP86478 221 aa10.92□□□□□ -0.66
AP4E1-204ENST00000561004 PRR20CP86479 221 aa10.92□□□□□ -0.66
AP4E1-204ENST00000561004 PRR20DP86480 221 aa10.92□□□□□ -0.66
AP4E1-204ENST00000561004 PRR20BP86481 221 aa10.92□□□□□ -0.66
AP4E1-204ENST00000561004 PRR20AP86496 221 aa10.92□□□□□ -0.66
AP4E1-204ENST00000561004 MAP3K7O43318 606 aa10.9□□□□□ -0.66
AP4E1-204ENST00000561004 SLC4A3P48751 1232 aa10.9□□□□□ -0.66
AP4E1-204ENST00000561004 EN1Q05925 392 aaPredicted RBP10.9□□□□□ -0.66
AP4E1-204ENST00000561004 STK17AQ9UEE5 414 aa10.9□□□□□ -0.66
AP4E1-204ENST00000561004 RNF40O75150 1001 aa10.89□□□□□ -0.67
AP4E1-204ENST00000561004 CDCA7LQ96GN5 454 aa10.89□□□□□ -0.67
AP4E1-204ENST00000561004 PRSS12P56730 875 aa10.88□□□□□ -0.67
AP4E1-204ENST00000561004 ZNF598Q86UK7 904 aaKnown RBP10.88□□□□□ -0.67
AP4E1-204ENST00000561004 NKX2-3Q8TAU0 364 aa10.88□□□□□ -0.67
AP4E1-204ENST00000561004 TATDN2Q93075 761 aa10.87□□□□□ -0.67
AP4E1-204ENST00000561004 PRR14Q9BWN1 585 aa10.87□□□□□ -0.67
AP4E1-204ENST00000561004 APLP1P51693 650 aa10.86□□□□□ -0.67
AP4E1-204ENST00000561004 TRIM67Q6ZTA4 783 aa10.86□□□□□ -0.67
AP4E1-204ENST00000561004 DDX12PQ92771 950 aa10.86□□□□□ -0.67
AP4E1-204ENST00000561004 PNMA3Q9UL41 463 aa10.86□□□□□ -0.67
AP4E1-204ENST00000561004 SMAPO00193 183 aa10.85□□□□□ -0.67
AP4E1-204ENST00000561004 POTECB2RU33 542 aa10.84□□□□□ -0.67
AP4E1-204ENST00000561004 DPYSL4O14531 572 aa10.84□□□□□ -0.67
AP4E1-204ENST00000561004 ZPR1O75312 459 aa10.84□□□□□ -0.67
AP4E1-204ENST00000561004 INSM1Q01101 510 aaPredicted RBP10.84□□□□□ -0.67
AP4E1-204ENST00000561004 CAMK2BQ13554 666 aa10.84□□□□□ -0.67
AP4E1-204ENST00000561004 NBR1Q14596 966 aa10.84□□□□□ -0.67
AP4E1-204ENST00000561004 LCE2AQ5TA79 106 aaPredicted RBP10.84□□□□□ -0.67
AP4E1-204ENST00000561004 SPRYD7Q5W111 196 aa10.84□□□□□ -0.67
AP4E1-204ENST00000561004 SLF2Q8IX21 1173 aa10.84□□□□□ -0.67
AP4E1-204ENST00000561004 FAM187AA6NFU0 413 aa10.83□□□□□ -0.68
AP4E1-204ENST00000561004 COPS2P61201 443 aa10.83□□□□□ -0.68
AP4E1-204ENST00000561004 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
AP4E1-204ENST00000561004 TSR1Q2NL82 804 aaKnown RBP10.81□□□□□ -0.68
AP4E1-204ENST00000561004 WFS1O76024 890 aa10.79□□□□□ -0.68
AP4E1-204ENST00000561004 RNF223E7ERA6 249 aa10.78□□□□□ -0.68
AP4E1-204ENST00000561004 ANKLE1Q8NAG6 615 aa10.78□□□□□ -0.68
AP4E1-204ENST00000561004 ZNF697Q5TEC3 545 aa10.77□□□□□ -0.69
AP4E1-204ENST00000561004 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.69
AP4E1-204ENST00000561004 NUDT18Q6ZVK8 323 aa10.75□□□□□ -0.69
AP4E1-204ENST00000561004 AAASQ9NRG9 546 aa10.75□□□□□ -0.69
AP4E1-204ENST00000561004 SPDYE16A6NNV3 312 aaPredicted RBP10.74□□□□□ -0.69
AP4E1-204ENST00000561004 PCDHB3Q9Y5E6 796 aa10.74□□□□□ -0.69
AP4E1-204ENST00000561004 WIPF1O43516 503 aa10.73□□□□□ -0.69
AP4E1-204ENST00000561004 LMOD2Q6P5Q4 547 aa10.73□□□□□ -0.69
AP4E1-204ENST00000561004 FAM198AQ9UFP1 575 aa10.73□□□□□ -0.69
AP4E1-204ENST00000561004 GDF9O60383 454 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms