RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 LAMC1P11047 1609 aa24.02■■□□□ 1.44
TRPM1-211ENST00000560658 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
TRPM1-211ENST00000560658 RALBP1Q15311 655 aa24.02■■□□□ 1.44
TRPM1-211ENST00000560658 BRD4O60885 1362 aaPredicted RBP24■■□□□ 1.43
TRPM1-211ENST00000560658 ZNF326Q5BKZ1 582 aaKnown RBP23.99■■□□□ 1.43
TRPM1-211ENST00000560658 HNRNPMP52272 730 aaKnown RBP eCLIP23.98■■□□□ 1.43
TRPM1-211ENST00000560658 NUDCQ9Y266 331 aa23.98■■□□□ 1.43
TRPM1-211ENST00000560658 CCDC144AA2RUR9 1427 aa23.97■■□□□ 1.43
TRPM1-211ENST00000560658 E9PCH4 1651 aa23.97■■□□□ 1.43
TRPM1-211ENST00000560658 GPRASP1Q5JY77 1395 aa23.97■■□□□ 1.43
TRPM1-211ENST00000560658 RNF123Q5XPI4 1314 aa23.96■■□□□ 1.43
TRPM1-211ENST00000560658 ATP10AO60312 1499 aa23.96■■□□□ 1.43
TRPM1-211ENST00000560658 IQGAP3Q86VI3 1631 aa23.95■■□□□ 1.42
TRPM1-211ENST00000560658 EIF2AK4Q9P2K8 1649 aaKnown RBP23.95■■□□□ 1.42
TRPM1-211ENST00000560658 PRAG1Q86YV5 1406 aa23.95■■□□□ 1.42
TRPM1-211ENST00000560658 ABCC2Q92887 1545 aa23.94■■□□□ 1.42
TRPM1-211ENST00000560658 TRPM1Q7Z4N2 1603 aa23.94■■□□□ 1.42
TRPM1-211ENST00000560658 MYBBP1AQ9BQG0 1328 aaKnown RBP23.93■■□□□ 1.42
TRPM1-211ENST00000560658 PNISRQ8TF01 805 aaKnown RBP23.93■■□□□ 1.42
TRPM1-211ENST00000560658 ARHGAP5Q13017 1502 aa23.93■■□□□ 1.42
TRPM1-211ENST00000560658 DUOX2Q9NRD8 1548 aa23.93■■□□□ 1.42
TRPM1-211ENST00000560658 INSRP06213 1382 aa23.93■■□□□ 1.42
TRPM1-211ENST00000560658 LRPPRCP42704 1394 aaKnown RBP23.93■■□□□ 1.42
TRPM1-211ENST00000560658 WASHC2CQ9Y4E1 1318 aa23.93■■□□□ 1.42
TRPM1-211ENST00000560658 TMC1Q8TDI8 760 aa23.92■■□□□ 1.42
TRPM1-211ENST00000560658 DCAF11Q8TEB1 546 aa23.92■■□□□ 1.42
TRPM1-211ENST00000560658 ERBINQ96RT1 1412 aa23.91■■□□□ 1.42
TRPM1-211ENST00000560658 SYCP2Q9BX26 1530 aa23.91■■□□□ 1.42
TRPM1-211ENST00000560658 MAGI2Q86UL8 1455 aa23.91■■□□□ 1.42
TRPM1-211ENST00000560658 MYO5CQ9NQX4 1742 aa23.9■■□□□ 1.42
TRPM1-211ENST00000560658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.9■■□□□ 1.42
TRPM1-211ENST00000560658 CYB5RLQ6IPT4 315 aa23.9■■□□□ 1.42
TRPM1-211ENST00000560658 IRX6P78412 446 aaPredicted RBP23.89■■□□□ 1.42
TRPM1-211ENST00000560658 ZMYM4Q5VZL5 1548 aa23.89■■□□□ 1.42
TRPM1-211ENST00000560658 ST20-MTHFSA0A0A6YYL1 179 aa23.88■■□□□ 1.41
TRPM1-211ENST00000560658 TTC37Q6PGP7 1564 aa23.87■■□□□ 1.41
TRPM1-211ENST00000560658 CHD1O14646 1710 aa23.86■■□□□ 1.41
TRPM1-211ENST00000560658 POLR3GLQ9BT43 218 aa23.86■■□□□ 1.41
TRPM1-211ENST00000560658 UHRF1BP1LA0JNW5 1464 aa23.85■■□□□ 1.41
TRPM1-211ENST00000560658 PRDM15P57071 1507 aaPredicted RBP23.85■■□□□ 1.41
TRPM1-211ENST00000560658 STAC3Q96MF2 364 aa23.83■■□□□ 1.41
TRPM1-211ENST00000560658 KDM2AQ9Y2K7 1162 aa23.83■■□□□ 1.41
TRPM1-211ENST00000560658 PDE3BQ13370 1112 aa23.82■■□□□ 1.4
TRPM1-211ENST00000560658 PARD3Q8TEW0 1356 aa23.82■■□□□ 1.4
TRPM1-211ENST00000560658 PLA2R1Q13018 1463 aa23.82■■□□□ 1.4
TRPM1-211ENST00000560658 NLRP13Q86W25 1043 aa23.81■■□□□ 1.4
TRPM1-211ENST00000560658 PLCH2O75038 1416 aa23.81■■□□□ 1.4
TRPM1-211ENST00000560658 A2MP01023 1474 aa23.81■■□□□ 1.4
TRPM1-211ENST00000560658 COL17A1Q9UMD9 1497 aaPredicted RBP23.81■■□□□ 1.4
TRPM1-211ENST00000560658 ARAP3Q8WWN8 1544 aa23.81■■□□□ 1.4
TRPM1-211ENST00000560658 TRHP20396 242 aaPredicted RBP23.81■■□□□ 1.4
TRPM1-211ENST00000560658 EFCAB2Q5VUJ9 269 aa23.76■■□□□ 1.39
TRPM1-211ENST00000560658 RTEL1-TNFRSF6BF6WH68 1400 aa23.76■■□□□ 1.39
TRPM1-211ENST00000560658 B4GALNT3Q6L9W6 998 aa23.74■■□□□ 1.39
TRPM1-211ENST00000560658 ABCC1P33527 1531 aa23.73■■□□□ 1.39
TRPM1-211ENST00000560658 RNF17Q9BXT8 1623 aaKnown RBP23.73■■□□□ 1.39
TRPM1-211ENST00000560658 MYT1LQ9UL68 1186 aa23.71■■□□□ 1.39
TRPM1-211ENST00000560658 TMF1P82094 1093 aa23.7■■□□□ 1.39
TRPM1-211ENST00000560658 ERICH6Q7L0X2 663 aa23.7■■□□□ 1.38
TRPM1-211ENST00000560658 PER1O15534 1290 aaPredicted RBP23.69■■□□□ 1.38
TRPM1-211ENST00000560658 CCDC136Q96JN2 1154 aa23.68■■□□□ 1.38
TRPM1-211ENST00000560658 ZCCHC11Q5TAX3 1644 aaKnown RBP23.68■■□□□ 1.38
TRPM1-211ENST00000560658 NEURL4Q96JN8 1562 aa23.67■■□□□ 1.38
TRPM1-211ENST00000560658 TESK2Q96S53 571 aa23.66■■□□□ 1.38
TRPM1-211ENST00000560658 CLASP1Q7Z460 1538 aa23.66■■□□□ 1.38
TRPM1-211ENST00000560658 MSH5O43196 834 aa23.65■■□□□ 1.38
TRPM1-211ENST00000560658 TRPM2O94759 1503 aa23.64■■□□□ 1.38
TRPM1-211ENST00000560658 SLC24A1O60721 1099 aa23.64■■□□□ 1.38
TRPM1-211ENST00000560658 CDCA8Q53HL2 280 aa23.64■■□□□ 1.38
TRPM1-211ENST00000560658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.64■■□□□ 1.38
TRPM1-211ENST00000560658 BLMP54132 1417 aaPredicted RBP23.63■■□□□ 1.37
TRPM1-211ENST00000560658 SCAPERQ9BY12 1400 aa23.63■■□□□ 1.37
TRPM1-211ENST00000560658 RGL3Q3MIN7 710 aa23.62■■□□□ 1.37
TRPM1-211ENST00000560658 NBPF1Q3BBV0 1214 aa23.62■■□□□ 1.37
TRPM1-211ENST00000560658 PTPRTO14522 1441 aa23.61■■□□□ 1.37
TRPM1-211ENST00000560658 RRP1P56182 461 aaKnown RBP23.6■■□□□ 1.37
TRPM1-211ENST00000560658 DEPDC5O75140 1603 aa23.6■■□□□ 1.37
TRPM1-211ENST00000560658 ERCC6L2Q5T890 1561 aa23.59■■□□□ 1.37
TRPM1-211ENST00000560658 WDR7Q9Y4E6 1490 aa23.59■■□□□ 1.37
TRPM1-211ENST00000560658 DISP3Q9P2K9 1392 aa23.59■■□□□ 1.37
TRPM1-211ENST00000560658 MADDQ8WXG6 1647 aa23.58■■□□□ 1.37
TRPM1-211ENST00000560658 RCAN3Q9UKA8 241 aa23.58■■□□□ 1.36
TRPM1-211ENST00000560658 IQGAP1P46940 1657 aa23.57■■□□□ 1.36
TRPM1-211ENST00000560658 ZFYVE16Q7Z3T8 1539 aa23.57■■□□□ 1.36
TRPM1-211ENST00000560658 SPAG9O60271 1321 aaKnown RBP23.56■■□□□ 1.36
TRPM1-211ENST00000560658 CEP152O94986 1710 aa23.56■■□□□ 1.36
TRPM1-211ENST00000560658 CNGB1Q14028 1251 aaPredicted RBP23.56■■□□□ 1.36
TRPM1-211ENST00000560658 SPHKAPQ2M3C7 1700 aa23.56■■□□□ 1.36
TRPM1-211ENST00000560658 TET3O43151 1660 aa23.56■■□□□ 1.36
TRPM1-211ENST00000560658 TRAPPC8Q9Y2L5 1435 aa23.55■■□□□ 1.36
TRPM1-211ENST00000560658 KIAA1210Q9ULL0 1709 aa23.55■■□□□ 1.36
TRPM1-211ENST00000560658 KANK1Q14678 1352 aa23.55■■□□□ 1.36
TRPM1-211ENST00000560658 AEBP2Q6ZN18 517 aaPredicted RBP23.55■■□□□ 1.36
TRPM1-211ENST00000560658 SCAF11Q99590 1463 aaKnown RBP23.54■■□□□ 1.36
TRPM1-211ENST00000560658 SYNMO15061 1565 aa23.54■■□□□ 1.36
TRPM1-211ENST00000560658 PANK3Q9H999 370 aa23.53■■□□□ 1.36
TRPM1-211ENST00000560658 EIF3AQ14152 1382 aaKnown RBP23.53■■□□□ 1.36
TRPM1-211ENST00000560658 NPC1L1Q9UHC9 1359 aa23.53■■□□□ 1.36
TRPM1-211ENST00000560658 VWDEQ8N2E2 1590 aa23.52■■□□□ 1.36
TRPM1-211ENST00000560658 INO80Q9ULG1 1556 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms