RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 TRPM1Q7Z4N2 1603 aa21.05■□□□□ 0.96
PBX1-219ENST00000560641 C8orf34Q49A92 452 aa21.05■□□□□ 0.96
PBX1-219ENST00000560641 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
PBX1-219ENST00000560641 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.96
PBX1-219ENST00000560641 PBRM1Q86U86 1689 aa21.02■□□□□ 0.96
PBX1-219ENST00000560641 CRBNQ96SW2 442 aa21■□□□□ 0.95
PBX1-219ENST00000560641 CAMSAP2Q08AD1 1489 aa21■□□□□ 0.95
PBX1-219ENST00000560641 TARBP1Q13395 1621 aaKnown RBP20.99■□□□□ 0.95
PBX1-219ENST00000560641 SHANK2Q9UPX8 1470 aa20.99■□□□□ 0.95
PBX1-219ENST00000560641 DCAF11Q8TEB1 546 aa20.99■□□□□ 0.95
PBX1-219ENST00000560641 DAXXQ9UER7 740 aaPredicted RBP20.97■□□□□ 0.95
PBX1-219ENST00000560641 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
PBX1-219ENST00000560641 PTPRGP23470 1445 aa20.96■□□□□ 0.95
PBX1-219ENST00000560641 ADAMTS12P58397 1594 aa20.96■□□□□ 0.95
PBX1-219ENST00000560641 COL17A1Q9UMD9 1497 aaPredicted RBP20.96■□□□□ 0.95
PBX1-219ENST00000560641 PER1O15534 1290 aaPredicted RBP20.95■□□□□ 0.94
PBX1-219ENST00000560641 FRAT2O75474 233 aaPredicted RBP20.95■□□□□ 0.94
PBX1-219ENST00000560641 RAPGEF6Q8TEU7 1601 aa20.95■□□□□ 0.94
PBX1-219ENST00000560641 CCDC144AA2RUR9 1427 aa20.94■□□□□ 0.94
PBX1-219ENST00000560641 GPRASP1Q5JY77 1395 aa20.94■□□□□ 0.94
PBX1-219ENST00000560641 EIF3AQ14152 1382 aaKnown RBP20.94■□□□□ 0.94
PBX1-219ENST00000560641 PRDM15P57071 1507 aaPredicted RBP20.93■□□□□ 0.94
PBX1-219ENST00000560641 ZMYM3Q14202 1370 aa20.93■□□□□ 0.94
PBX1-219ENST00000560641 EIF5BO60841 1220 aaKnown RBP20.92■□□□□ 0.94
PBX1-219ENST00000560641 L1TD1Q5T7N2 865 aaKnown RBP20.92■□□□□ 0.94
PBX1-219ENST00000560641 NUP153P49790 1475 aaKnown RBP20.92■□□□□ 0.94
PBX1-219ENST00000560641 CDCA7LQ96GN5 454 aa20.92■□□□□ 0.94
PBX1-219ENST00000560641 KIAA0556O60303 1618 aa20.92■□□□□ 0.94
PBX1-219ENST00000560641 CARD11Q9BXL7 1154 aa20.91■□□□□ 0.94
PBX1-219ENST00000560641 ABCC10Q5T3U5 1492 aa20.89■□□□□ 0.93
PBX1-219ENST00000560641 CDC42BPAQ5VT25 1732 aa20.89■□□□□ 0.93
PBX1-219ENST00000560641 NLRP1Q9C000 1473 aa20.89■□□□□ 0.93
PBX1-219ENST00000560641 ZNF521Q96K83 1311 aa20.89■□□□□ 0.93
PBX1-219ENST00000560641 GLIPR1L2Q4G1C9 344 aa20.88■□□□□ 0.93
PBX1-219ENST00000560641 ST20-MTHFSA0A0A6YYL1 179 aa20.87■□□□□ 0.93
PBX1-219ENST00000560641 SLC4A3P48751 1232 aa20.87■□□□□ 0.93
PBX1-219ENST00000560641 ANKRD30AQ9BXX3 1397 aa20.86■□□□□ 0.93
PBX1-219ENST00000560641 PLIN1O60240 522 aa20.86■□□□□ 0.93
PBX1-219ENST00000560641 EIF2AK4Q9P2K8 1649 aaKnown RBP20.86■□□□□ 0.93
PBX1-219ENST00000560641 PRAG1Q86YV5 1406 aa20.86■□□□□ 0.93
PBX1-219ENST00000560641 USP19O94966 1318 aa20.86■□□□□ 0.93
PBX1-219ENST00000560641 GPATCH8Q9UKJ3 1502 aaKnown RBP20.85■□□□□ 0.93
PBX1-219ENST00000560641 TROQ12816 1431 aaPredicted RBP20.85■□□□□ 0.93
PBX1-219ENST00000560641 ANKRD50Q9ULJ7 1429 aa20.85■□□□□ 0.93
PBX1-219ENST00000560641 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
PBX1-219ENST00000560641 PLXNC1O60486 1568 aa20.85■□□□□ 0.93
PBX1-219ENST00000560641 PKD2Q13563 968 aa20.85■□□□□ 0.93
PBX1-219ENST00000560641 PKNOX2Q96KN3 472 aa20.84■□□□□ 0.93
PBX1-219ENST00000560641 RRAGDQ9NQL2 400 aaPredicted RBP20.84■□□□□ 0.93
PBX1-219ENST00000560641 RNF17Q9BXT8 1623 aaKnown RBP20.83■□□□□ 0.93
PBX1-219ENST00000560641 ABCC2Q92887 1545 aa20.82■□□□□ 0.92
PBX1-219ENST00000560641 DISP1Q96F81 1524 aa20.82■□□□□ 0.92
PBX1-219ENST00000560641 C20orf194Q5TEA3 1177 aa20.82■□□□□ 0.92
PBX1-219ENST00000560641 SKAP1Q86WV1 359 aa20.82■□□□□ 0.92
PBX1-219ENST00000560641 DUSP27Q5VZP5 1158 aa20.82■□□□□ 0.92
PBX1-219ENST00000560641 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
PBX1-219ENST00000560641 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.81■□□□□ 0.92
PBX1-219ENST00000560641 POLR3GLQ9BT43 218 aa20.81■□□□□ 0.92
PBX1-219ENST00000560641 CLCN1P35523 988 aa20.8■□□□□ 0.92
PBX1-219ENST00000560641 FSD2A1L4K1 749 aa20.8■□□□□ 0.92
PBX1-219ENST00000560641 TRMT2AQ8IZ69 625 aaKnown RBP20.8■□□□□ 0.92
PBX1-219ENST00000560641 ANTXR1Q9H6X2 564 aa20.8■□□□□ 0.92
PBX1-219ENST00000560641 NINLQ9Y2I6 1382 aa20.79■□□□□ 0.92
PBX1-219ENST00000560641 RRP9O43818 475 aaKnown RBP20.78■□□□□ 0.92
PBX1-219ENST00000560641 ARHGEF5Q12774 1597 aa20.78■□□□□ 0.92
PBX1-219ENST00000560641 NUP160Q12769 1436 aa20.77■□□□□ 0.92
PBX1-219ENST00000560641 SENP3-EIF4A1A0A087X0R7 540 aa20.77■□□□□ 0.92
PBX1-219ENST00000560641 MYO5CQ9NQX4 1742 aa20.77■□□□□ 0.92
PBX1-219ENST00000560641 BECN1Q14457 450 aa20.76■□□□□ 0.91
PBX1-219ENST00000560641 POGKQ9P215 609 aa20.76■□□□□ 0.91
PBX1-219ENST00000560641 PLEKHH1Q9ULM0 1364 aa20.75■□□□□ 0.91
PBX1-219ENST00000560641 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
PBX1-219ENST00000560641 MAPK8IP3Q9UPT6 1336 aa20.74■□□□□ 0.91
PBX1-219ENST00000560641 ZNF326Q5BKZ1 582 aaKnown RBP20.73■□□□□ 0.91
PBX1-219ENST00000560641 CNGB1Q14028 1251 aaPredicted RBP20.72■□□□□ 0.91
PBX1-219ENST00000560641 PIK3C2GO75747 1445 aa20.72■□□□□ 0.91
PBX1-219ENST00000560641 CCDC141Q6ZP82 1450 aa20.72■□□□□ 0.91
PBX1-219ENST00000560641 SYNMO15061 1565 aa20.72■□□□□ 0.91
PBX1-219ENST00000560641 UNC13BO14795 1591 aa20.72■□□□□ 0.91
PBX1-219ENST00000560641 NKTRP30414 1462 aaKnown RBP20.71■□□□□ 0.91
PBX1-219ENST00000560641 ERBINQ96RT1 1412 aa20.71■□□□□ 0.91
PBX1-219ENST00000560641 TESK2Q96S53 571 aa20.7■□□□□ 0.9
PBX1-219ENST00000560641 ISY1Q9ULR0 285 aaKnown RBP20.69■□□□□ 0.9
PBX1-219ENST00000560641 FAM135AQ9P2D6 1515 aa20.69■□□□□ 0.9
PBX1-219ENST00000560641 NUP155O75694 1391 aa20.69■□□□□ 0.9
PBX1-219ENST00000560641 C9orf84Q5VXU9 1444 aa20.69■□□□□ 0.9
PBX1-219ENST00000560641 SLFN5Q08AF3 891 aa20.68■□□□□ 0.9
PBX1-219ENST00000560641 NPC1L1Q9UHC9 1359 aa20.68■□□□□ 0.9
PBX1-219ENST00000560641 IQGAP1P46940 1657 aa20.68■□□□□ 0.9
PBX1-219ENST00000560641 DISP3Q9P2K9 1392 aa20.68■□□□□ 0.9
PBX1-219ENST00000560641 AAMPQ13685 434 aa20.68■□□□□ 0.9
PBX1-219ENST00000560641 GOLGA2Q08379 1002 aa20.67■□□□□ 0.9
PBX1-219ENST00000560641 WDR7Q9Y4E6 1490 aa20.67■□□□□ 0.9
PBX1-219ENST00000560641 A2MP01023 1474 aa20.66■□□□□ 0.9
PBX1-219ENST00000560641 NGEFQ8N5V2 710 aa20.66■□□□□ 0.9
PBX1-219ENST00000560641 PRG4Q92954 1404 aaPredicted RBP20.65■□□□□ 0.9
PBX1-219ENST00000560641 SCAPERQ9BY12 1400 aa20.65■□□□□ 0.9
PBX1-219ENST00000560641 XRCC6P12956 609 aaKnown RBP eCLIP20.65■□□□□ 0.9
PBX1-219ENST00000560641 CFDP1Q9UEE9 299 aaPredicted RBP20.65■□□□□ 0.9
PBX1-219ENST00000560641 ATP10AO60312 1499 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms