RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 WDR70Q9NW82 654 aa9.1□□□□□ -0.95
SNRPA1-209ENST00000560307 GTF3C3Q9Y5Q9 886 aa9.1□□□□□ -0.95
SNRPA1-209ENST00000560307 TTBK1Q5TCY1 1321 aaPredicted RBP9.09□□□□□ -0.95
SNRPA1-209ENST00000560307 GFRA3O60609 400 aa9.09□□□□□ -0.95
SNRPA1-209ENST00000560307 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
SNRPA1-209ENST00000560307 TIMELESSQ9UNS1 1208 aa9.09□□□□□ -0.95
SNRPA1-209ENST00000560307 KDM4FA0A1W2PPD8 638 aa9.08□□□□□ -0.96
SNRPA1-209ENST00000560307 RB1CC1Q8TDY2 1594 aa9.04□□□□□ -0.96
SNRPA1-209ENST00000560307 ITGBL1O95965 494 aaPredicted RBP9.04□□□□□ -0.96
SNRPA1-209ENST00000560307 ZNF787Q6DD87 383 aa9.04□□□□□ -0.96
SNRPA1-209ENST00000560307 PTCD2Q8WV60 388 aaKnown RBP9.04□□□□□ -0.96
SNRPA1-209ENST00000560307 BHMG1C9JSJ3 638 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-209ENST00000560307 MFRPQ9BY79 579 aa9.02□□□□□ -0.97
SNRPA1-209ENST00000560307 KCNV2Q8TDN2 545 aa9.01□□□□□ -0.97
SNRPA1-209ENST00000560307 SLC4A5Q9BY07 1137 aa9.01□□□□□ -0.97
SNRPA1-209ENST00000560307 TBC1D12O60347 775 aa9□□□□□ -0.97
SNRPA1-209ENST00000560307 NEUROD1Q13562 356 aa9□□□□□ -0.97
SNRPA1-209ENST00000560307 LMOD2Q6P5Q4 547 aa9□□□□□ -0.97
SNRPA1-209ENST00000560307 CADPS2Q86UW7 1296 aa9□□□□□ -0.97
SNRPA1-209ENST00000560307 NBPF3Q9H094 633 aa9□□□□□ -0.97
SNRPA1-209ENST00000560307 TMEM132AQ24JP5 1023 aa8.99□□□□□ -0.97
SNRPA1-209ENST00000560307 ZNF454Q8N9F8 522 aa8.99□□□□□ -0.97
SNRPA1-209ENST00000560307 ZNF775Q96BV0 537 aaPredicted RBP8.99□□□□□ -0.97
SNRPA1-209ENST00000560307 KCNC4Q03721 635 aa8.97□□□□□ -0.97
SNRPA1-209ENST00000560307 CLSPNQ9HAW4 1339 aa8.96□□□□□ -0.98
SNRPA1-209ENST00000560307 NRG2O14511 850 aaPredicted RBP8.95□□□□□ -0.98
SNRPA1-209ENST00000560307 PTPREP23469 700 aa8.95□□□□□ -0.98
SNRPA1-209ENST00000560307 ERICH6Q7L0X2 663 aa8.95□□□□□ -0.98
SNRPA1-209ENST00000560307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.95□□□□□ -0.98
SNRPA1-209ENST00000560307 ANKK1Q8NFD2 765 aa8.95□□□□□ -0.98
SNRPA1-209ENST00000560307 ZBED2Q9BTP6 218 aa8.95□□□□□ -0.98
SNRPA1-209ENST00000560307 BCL2L12Q9HB09 334 aa8.95□□□□□ -0.98
SNRPA1-209ENST00000560307 PLPP6Q8IY26 295 aa8.94□□□□□ -0.98
SNRPA1-209ENST00000560307 RSF1Q96T23 1441 aaPredicted RBP8.94□□□□□ -0.98
SNRPA1-209ENST00000560307 DIEXFQ68CQ4 756 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-209ENST00000560307 WRNQ14191 1432 aaPredicted RBP eCLIP8.93□□□□□ -0.98
SNRPA1-209ENST00000560307 BCAMP50895 628 aa8.91□□□□□ -0.98
SNRPA1-209ENST00000560307 C14orf37Q86TY3 774 aa8.91□□□□□ -0.98
SNRPA1-209ENST00000560307 FOXK1P85037 733 aa8.87□□□□□ -0.99
SNRPA1-209ENST00000560307 NYAP1Q6ZVC0 841 aa8.87□□□□□ -0.99
SNRPA1-209ENST00000560307 PRKD2Q9BZL6 878 aa8.87□□□□□ -0.99
SNRPA1-209ENST00000560307 EIF4G1Q04637 1599 aaKnown RBP8.86□□□□□ -0.99
SNRPA1-209ENST00000560307 CCER1Q8TC90 406 aaPredicted RBP8.86□□□□□ -0.99
SNRPA1-209ENST00000560307 PPP1R37O75864 691 aa8.85□□□□□ -0.99
SNRPA1-209ENST00000560307 E2F4Q16254 413 aa8.85□□□□□ -0.99
SNRPA1-209ENST00000560307 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
SNRPA1-209ENST00000560307 UPF1Q92900 1129 aaKnown RBP eCLIP8.84□□□□□ -0.99
SNRPA1-209ENST00000560307 NEUROD2Q15784 382 aa8.83□□□□□ -1
SNRPA1-209ENST00000560307 WBP1LQ9NX94 342 aa8.83□□□□□ -1
SNRPA1-209ENST00000560307 SOWAHBA6NEL2 793 aa8.82□□□□□ -1
SNRPA1-209ENST00000560307 SEMA3EO15041 775 aa8.82□□□□□ -1
SNRPA1-209ENST00000560307 FOSBP53539 338 aa8.82□□□□□ -1
SNRPA1-209ENST00000560307 BRPF1P55201 1214 aaPredicted RBP8.82□□□□□ -1
SNRPA1-209ENST00000560307 DSG2Q14126 1118 aa8.82□□□□□ -1
SNRPA1-209ENST00000560307 ZC3H15Q8WU90 426 aaKnown RBP8.82□□□□□ -1
SNRPA1-209ENST00000560307 SLC24A3Q9HC58 644 aa8.8□□□□□ -1
SNRPA1-209ENST00000560307 PDZRN3Q9UPQ7 1066 aa8.8□□□□□ -1
SNRPA1-209ENST00000560307 ARXQ96QS3 562 aa8.79□□□□□ -1
SNRPA1-209ENST00000560307 GPHNQ9NQX3 736 aaPredicted RBP8.79□□□□□ -1
SNRPA1-209ENST00000560307 RABGEF1Q9UJ41 708 aa8.79□□□□□ -1
SNRPA1-209ENST00000560307 BAZ1AQ9NRL2 1556 aaPredicted RBP8.78□□□□□ -1
SNRPA1-209ENST00000560307 PROX2Q3B8N5 592 aa8.77□□□□□ -1.01
SNRPA1-209ENST00000560307 ZDHHC16Q969W1 377 aa8.77□□□□□ -1.01
SNRPA1-209ENST00000560307 LARP6Q9BRS8 491 aaKnown RBP8.77□□□□□ -1.01
SNRPA1-209ENST00000560307 ADAM33Q9BZ11 813 aa8.77□□□□□ -1.01
SNRPA1-209ENST00000560307 EEA1Q15075 1411 aa8.77□□□□□ -1.01
SNRPA1-209ENST00000560307 SCRIBQ14160 1630 aa8.76□□□□□ -1.01
SNRPA1-209ENST00000560307 TESPA1A2RU30 521 aaPredicted RBP8.76□□□□□ -1.01
SNRPA1-209ENST00000560307 OXER1Q8TDS5 423 aa8.76□□□□□ -1.01
SNRPA1-209ENST00000560307 SMYD5Q6GMV2 418 aa8.75□□□□□ -1.01
SNRPA1-209ENST00000560307 JPH4Q96JJ6 628 aa8.75□□□□□ -1.01
SNRPA1-209ENST00000560307 ZFRQ96KR1 1074 aaKnown RBP8.75□□□□□ -1.01
SNRPA1-209ENST00000560307 PDE4AP27815 886 aa8.74□□□□□ -1.01
SNRPA1-209ENST00000560307 V9GY48 417 aaPredicted RBP8.74□□□□□ -1.01
SNRPA1-209ENST00000560307 PPP1R3GB7ZBB8 358 aa8.73□□□□□ -1.01
SNRPA1-209ENST00000560307 LAPTM4BQ86VI4 370 aa8.73□□□□□ -1.01
SNRPA1-209ENST00000560307 TNIKQ9UKE5 1360 aa8.73□□□□□ -1.01
SNRPA1-209ENST00000560307 HPS5Q9UPZ3 1129 aa8.72□□□□□ -1.01
SNRPA1-209ENST00000560307 NCKAP5LQ9HCH0 1330 aa8.71□□□□□ -1.02
SNRPA1-209ENST00000560307 CEP162Q5TB80 1403 aa8.71□□□□□ -1.02
SNRPA1-209ENST00000560307 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
SNRPA1-209ENST00000560307 HOMEZQ8IX15 550 aa8.69□□□□□ -1.02
SNRPA1-209ENST00000560307 DDX27Q96GQ7 796 aaKnown RBP8.69□□□□□ -1.02
SNRPA1-209ENST00000560307 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
SNRPA1-209ENST00000560307 SEPT9Q9UHD8 586 aaPredicted RBP8.69□□□□□ -1.02
SNRPA1-209ENST00000560307 PPP1R18Q6NYC8 613 aa8.68□□□□□ -1.02
SNRPA1-209ENST00000560307 FAM9AQ8IZU1 332 aaPredicted RBP8.68□□□□□ -1.02
SNRPA1-209ENST00000560307 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
SNRPA1-209ENST00000560307 KIAA1468Q9P260 1216 aa8.68□□□□□ -1.02
SNRPA1-209ENST00000560307 NACADO15069 1562 aa8.67□□□□□ -1.02
SNRPA1-209ENST00000560307 ZMYND10O75800 440 aa8.67□□□□□ -1.02
SNRPA1-209ENST00000560307 MROH2BQ7Z745 1585 aa8.67□□□□□ -1.02
SNRPA1-209ENST00000560307 LRCH3Q96II8 777 aa8.67□□□□□ -1.02
SNRPA1-209ENST00000560307 COL9A1P20849 921 aa8.66□□□□□ -1.02
SNRPA1-209ENST00000560307 TREML4Q6UXN2 200 aa8.66□□□□□ -1.02
SNRPA1-209ENST00000560307 WIZO95785 1651 aa8.65□□□□□ -1.02
SNRPA1-209ENST00000560307 POTECB2RU33 542 aa8.65□□□□□ -1.02
SNRPA1-209ENST00000560307 EVI5O60447 810 aa8.65□□□□□ -1.02
SNRPA1-209ENST00000560307 KRI1Q8N9T8 703 aaKnown RBP8.65□□□□□ -1.02
SNRPA1-209ENST00000560307 MFSD10Q14728 455 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms