RNA–Protein interactions for RNA: ENST00000560099.5

PSMA4-218, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 2,596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-218ENST00000560099 NUDCQ9Y266 331 aa27.91■■■□□ 2.06
PSMA4-218ENST00000560099 TMC1Q8TDI8 760 aa27.91■■■□□ 2.06
PSMA4-218ENST00000560099 RSPH4AQ5TD94 716 aa27.89■■■□□ 2.06
PSMA4-218ENST00000560099 SYCP2Q9BX26 1530 aa27.89■■■□□ 2.06
PSMA4-218ENST00000560099 FANCIQ9NVI1 1328 aa27.88■■■□□ 2.05
PSMA4-218ENST00000560099 TTC37Q6PGP7 1564 aa27.87■■■□□ 2.05
PSMA4-218ENST00000560099 E9PCH4 1651 aa27.85■■■□□ 2.05
PSMA4-218ENST00000560099 CCDC144AA2RUR9 1427 aa27.85■■■□□ 2.05
PSMA4-218ENST00000560099 PRAG1Q86YV5 1406 aa27.85■■■□□ 2.05
PSMA4-218ENST00000560099 CHD1O14646 1710 aa27.84■■■□□ 2.05
PSMA4-218ENST00000560099 RGL3Q3MIN7 710 aa27.84■■■□□ 2.05
PSMA4-218ENST00000560099 PLA2R1Q13018 1463 aa27.84■■■□□ 2.05
PSMA4-218ENST00000560099 TRPM1Q7Z4N2 1603 aa27.84■■■□□ 2.05
PSMA4-218ENST00000560099 RNF123Q5XPI4 1314 aa27.84■■■□□ 2.05
PSMA4-218ENST00000560099 ARHGAP5Q13017 1502 aa27.83■■■□□ 2.05
PSMA4-218ENST00000560099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.83■■■□□ 2.052e-6■■□□□ 11.5
PSMA4-218ENST00000560099 NBPF1Q3BBV0 1214 aa27.82■■■□□ 2.04
PSMA4-218ENST00000560099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.82■■■□□ 2.042e-9■■■■■ 28.3
PSMA4-218ENST00000560099 LRPPRCP42704 1394 aaKnown RBP27.81■■■□□ 2.04
PSMA4-218ENST00000560099 MYBBP1AQ9BQG0 1328 aaKnown RBP27.81■■■□□ 2.04
PSMA4-218ENST00000560099 UNC13BO14795 1591 aa27.81■■■□□ 2.04
PSMA4-218ENST00000560099 MAST1Q9Y2H9 1570 aa27.8■■■□□ 2.04
PSMA4-218ENST00000560099 BRD4O60885 1362 aaPredicted RBP27.8■■■□□ 2.04
PSMA4-218ENST00000560099 RALBP1Q15311 655 aa27.79■■■□□ 2.04
PSMA4-218ENST00000560099 A2MP01023 1474 aa27.76■■■□□ 2.04
PSMA4-218ENST00000560099 PLEKHH2Q8IVE3 1493 aa27.76■■■□□ 2.04
PSMA4-218ENST00000560099 KTN1Q86UP2 1357 aaKnown RBP27.76■■■□□ 2.04
PSMA4-218ENST00000560099 ERCC6L2Q5T890 1561 aa27.75■■■□□ 2.03
PSMA4-218ENST00000560099 SHROOM2Q13796 1616 aa27.75■■■□□ 2.03
PSMA4-218ENST00000560099 MYO5CQ9NQX4 1742 aa27.73■■■□□ 2.03
PSMA4-218ENST00000560099 GPRASP1Q5JY77 1395 aa27.72■■■□□ 2.03
PSMA4-218ENST00000560099 IQGAP3Q86VI3 1631 aa27.72■■■□□ 2.03
PSMA4-218ENST00000560099 PLXNC1O60486 1568 aa27.71■■■□□ 2.03
PSMA4-218ENST00000560099 PER1O15534 1290 aaPredicted RBP27.7■■■□□ 2.02
PSMA4-218ENST00000560099 ABCC2Q92887 1545 aa27.69■■■□□ 2.02
PSMA4-218ENST00000560099 PARD3Q8TEW0 1356 aa27.69■■■□□ 2.02
PSMA4-218ENST00000560099 TESK2Q96S53 571 aa27.67■■■□□ 2.02
PSMA4-218ENST00000560099 NLRP13Q86W25 1043 aa27.66■■■□□ 2.02
PSMA4-218ENST00000560099 CCDC136Q96JN2 1154 aa27.65■■■□□ 2.02
PSMA4-218ENST00000560099 DISP3Q9P2K9 1392 aa27.65■■■□□ 2.02
PSMA4-218ENST00000560099 PRDM15P57071 1507 aaPredicted RBP27.65■■■□□ 2.02
PSMA4-218ENST00000560099 DUOX2Q9NRD8 1548 aa27.65■■■□□ 2.02
PSMA4-218ENST00000560099 COL17A1Q9UMD9 1497 aaPredicted RBP27.65■■■□□ 2.02
PSMA4-218ENST00000560099 LAMC1P11047 1609 aa27.63■■■□□ 2.01
PSMA4-218ENST00000560099 MAGI2Q86UL8 1455 aa27.62■■■□□ 2.01
PSMA4-218ENST00000560099 SALL2Q9Y467 1007 aaPredicted RBP27.61■■■□□ 2.01
PSMA4-218ENST00000560099 ATP10AO60312 1499 aa27.61■■■□□ 2.01
PSMA4-218ENST00000560099 PLCH2O75038 1416 aa27.59■■■□□ 2.01
PSMA4-218ENST00000560099 ERBINQ96RT1 1412 aa27.58■■■□□ 2.01
PSMA4-218ENST00000560099 CC2D1BQ5T0F9 858 aaKnown RBP27.57■■■□□ 2
PSMA4-218ENST00000560099 EIF2AK4Q9P2K8 1649 aaKnown RBP27.56■■■□□ 2
PSMA4-218ENST00000560099 PANK3Q9H999 370 aa27.56■■■□□ 2
PSMA4-218ENST00000560099 ERICH6Q7L0X2 663 aa27.55■■■□□ 2
PSMA4-218ENST00000560099 EFCAB2Q5VUJ9 269 aa27.54■■■□□ 2
PSMA4-218ENST00000560099 TRAPPC8Q9Y2L5 1435 aa27.54■■■□□ 2
PSMA4-218ENST00000560099 ZCCHC11Q5TAX3 1644 aaKnown RBP27.54■■■□□ 2
PSMA4-218ENST00000560099 RRP1P56182 461 aaKnown RBP27.53■■■□□ 2
PSMA4-218ENST00000560099 WASHC2CQ9Y4E1 1318 aa27.52■■■□□ 2
PSMA4-218ENST00000560099 ABCC1P33527 1531 aa27.51■■□□□ 1.99
PSMA4-218ENST00000560099 TMF1P82094 1093 aa27.51■■□□□ 1.99
PSMA4-218ENST00000560099 RCAN3Q9UKA8 241 aa27.51■■□□□ 1.99
PSMA4-218ENST00000560099 RNF17Q9BXT8 1623 aaKnown RBP27.49■■□□□ 1.99
PSMA4-218ENST00000560099 CDCA7LQ96GN5 454 aa27.49■■□□□ 1.99
PSMA4-218ENST00000560099 EXOC6Q8TAG9 804 aa27.47■■□□□ 1.99
PSMA4-218ENST00000560099 PDE3BQ13370 1112 aa27.47■■□□□ 1.99
PSMA4-218ENST00000560099 AFAP1Q8N556 730 aa27.44■■□□□ 1.98
PSMA4-218ENST00000560099 BLMP54132 1417 aaPredicted RBP27.42■■□□□ 1.98
PSMA4-218ENST00000560099 UHRF1BP1LA0JNW5 1464 aa27.42■■□□□ 1.98
PSMA4-218ENST00000560099 MADDQ8WXG6 1647 aa27.41■■□□□ 1.98
PSMA4-218ENST00000560099 SPAG9O60271 1321 aaKnown RBP27.41■■□□□ 1.98
PSMA4-218ENST00000560099 WDR7Q9Y4E6 1490 aa27.39■■□□□ 1.97
PSMA4-218ENST00000560099 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
PSMA4-218ENST00000560099 INSRP06213 1382 aa27.37■■□□□ 1.97
PSMA4-218ENST00000560099 IQGAP1P46940 1657 aa27.37■■□□□ 1.97
PSMA4-218ENST00000560099 TRPM2O94759 1503 aa27.36■■□□□ 1.97
PSMA4-218ENST00000560099 ZFYVE16Q7Z3T8 1539 aa27.36■■□□□ 1.97
PSMA4-218ENST00000560099 ZMYM4Q5VZL5 1548 aa27.35■■□□□ 1.97
PSMA4-218ENST00000560099 SPHKAPQ2M3C7 1700 aa27.34■■□□□ 1.97
PSMA4-218ENST00000560099 RTEL1-TNFRSF6BF6WH68 1400 aa27.34■■□□□ 1.97
PSMA4-218ENST00000560099 CEP152O94986 1710 aa27.34■■□□□ 1.97
PSMA4-218ENST00000560099 PAK3O75914 559 aaPredicted RBP27.34■■□□□ 1.97
PSMA4-218ENST00000560099 NOP58Q9Y2X3 529 aaKnown RBP27.34■■□□□ 1.97
PSMA4-218ENST00000560099 PTPRTO14522 1441 aa27.33■■□□□ 1.97
PSMA4-218ENST00000560099 CLTCL1P53675 1640 aa27.33■■□□□ 1.97
PSMA4-218ENST00000560099 ADAMTS8Q9UP79 889 aa27.32■■□□□ 1.96
PSMA4-218ENST00000560099 PLIN1O60240 522 aa27.31■■□□□ 1.96
PSMA4-218ENST00000560099 KNSTRNQ9Y448 316 aa27.3■■□□□ 1.96
PSMA4-218ENST00000560099 DEPDC5O75140 1603 aa27.29■■□□□ 1.96
PSMA4-218ENST00000560099 AMER1Q5JTC6 1135 aaPredicted RBP27.29■■□□□ 1.96
PSMA4-218ENST00000560099 PPP2R1AP30153 589 aa27.28■■□□□ 1.96
PSMA4-218ENST00000560099 SCAF11Q99590 1463 aaKnown RBP27.28■■□□□ 1.96
PSMA4-218ENST00000560099 ARAP3Q8WWN8 1544 aa27.28■■□□□ 1.96
PSMA4-218ENST00000560099 SCAPERQ9BY12 1400 aa27.26■■□□□ 1.95
PSMA4-218ENST00000560099 TET3O43151 1660 aa27.25■■□□□ 1.95
PSMA4-218ENST00000560099 ANP32AP39687 249 aaKnown RBP27.25■■□□□ 1.95
PSMA4-218ENST00000560099 IPO9Q96P70 1041 aaKnown RBP27.24■■□□□ 1.95
PSMA4-218ENST00000560099 SYNMO15061 1565 aa27.22■■□□□ 1.95
PSMA4-218ENST00000560099 STAC3Q96MF2 364 aa27.22■■□□□ 1.95
PSMA4-218ENST00000560099 ATP7AQ04656 1500 aa27.22■■□□□ 1.95
PSMA4-218ENST00000560099 KIF3BO15066 747 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 238.2 ms