RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 MBD5Q9P267 1494 aa8.54□□□□□ -1.04
ZEB1-217ENST00000559858 ZMYM4Q5VZL5 1548 aa8.54□□□□□ -1.04
ZEB1-217ENST00000559858 ISY1Q9ULR0 285 aaKnown RBP8.53□□□□□ -1.04
ZEB1-217ENST00000559858 THOC2Q8NI27 1593 aaKnown RBP8.53□□□□□ -1.04
ZEB1-217ENST00000559858 MCM4P33991 863 aa8.53□□□□□ -1.04
ZEB1-217ENST00000559858 GRIN2BQ13224 1484 aa8.53□□□□□ -1.04
ZEB1-217ENST00000559858 PARD3Q8TEW0 1356 aa8.53□□□□□ -1.04
ZEB1-217ENST00000559858 BLMP54132 1417 aaPredicted RBP8.52□□□□□ -1.04
ZEB1-217ENST00000559858 ROCK1Q13464 1354 aa8.52□□□□□ -1.05
ZEB1-217ENST00000559858 ZNF326Q5BKZ1 582 aaKnown RBP8.52□□□□□ -1.05
ZEB1-217ENST00000559858 KIF14Q15058 1648 aa8.52□□□□□ -1.05
ZEB1-217ENST00000559858 RBM10P98175 930 aaKnown RBP8.52□□□□□ -1.05
ZEB1-217ENST00000559858 GZF1Q9H116 711 aaPredicted RBP8.52□□□□□ -1.05
ZEB1-217ENST00000559858 PRDM4Q9UKN5 801 aa8.52□□□□□ -1.05
ZEB1-217ENST00000559858 VIRMAQ69YN4 1812 aaKnown RBP8.51□□□□□ -1.05
ZEB1-217ENST00000559858 TRIM44Q96DX7 344 aaPredicted RBP8.51□□□□□ -1.05
ZEB1-217ENST00000559858 LRRIQ1Q96JM4 1722 aa8.51□□□□□ -1.05
ZEB1-217ENST00000559858 TRAK2O60296 914 aa8.51□□□□□ -1.05
ZEB1-217ENST00000559858 CARD11Q9BXL7 1154 aa8.51□□□□□ -1.05
ZEB1-217ENST00000559858 GRPEL1Q9HAV7 217 aa8.51□□□□□ -1.05
ZEB1-217ENST00000559858 MAPK8IP3Q9UPT6 1336 aa8.5□□□□□ -1.05
ZEB1-217ENST00000559858 HMGXB3Q12766 1538 aa8.5□□□□□ -1.05
ZEB1-217ENST00000559858 CTTNBP2Q8WZ74 1663 aa8.5□□□□□ -1.05
ZEB1-217ENST00000559858 UPF2Q9HAU5 1272 aaKnown RBP8.5□□□□□ -1.05
ZEB1-217ENST00000559858 ERBB4Q15303 1308 aa8.5□□□□□ -1.05
ZEB1-217ENST00000559858 UHRF1BP1Q6BDS2 1440 aa8.49□□□□□ -1.05
ZEB1-217ENST00000559858 RALGAPBQ86X10 1494 aa8.49□□□□□ -1.05
ZEB1-217ENST00000559858 SLC24A1O60721 1099 aa8.49□□□□□ -1.05
ZEB1-217ENST00000559858 SEC24BO95487 1268 aa8.49□□□□□ -1.05
ZEB1-217ENST00000559858 MAP7D2Q96T17 732 aa8.49□□□□□ -1.05
ZEB1-217ENST00000559858 E9PCH4 1651 aa8.49□□□□□ -1.05
ZEB1-217ENST00000559858 EIF3AQ14152 1382 aaKnown RBP8.49□□□□□ -1.05
ZEB1-217ENST00000559858 ST20-MTHFSA0A0A6YYL1 179 aa8.48□□□□□ -1.05
ZEB1-217ENST00000559858 AAMPQ13685 434 aa8.48□□□□□ -1.05
ZEB1-217ENST00000559858 DUSP27Q5VZP5 1158 aa8.48□□□□□ -1.05
ZEB1-217ENST00000559858 TBC1D2Q9BYX2 928 aa8.48□□□□□ -1.05
ZEB1-217ENST00000559858 CHMP5Q9NZZ3 219 aa8.48□□□□□ -1.05
ZEB1-217ENST00000559858 TERF1P54274 439 aa8.48□□□□□ -1.05
ZEB1-217ENST00000559858 KIAA1211Q6ZU35 1233 aa8.48□□□□□ -1.05
ZEB1-217ENST00000559858 PRDM2Q13029 1718 aa8.47□□□□□ -1.05
ZEB1-217ENST00000559858 DDX11L8A8MPP1 907 aa8.47□□□□□ -1.05
ZEB1-217ENST00000559858 TBC1D32Q96NH3 1257 aa8.47□□□□□ -1.05
ZEB1-217ENST00000559858 SAMD9Q5K651 1589 aa8.47□□□□□ -1.05
ZEB1-217ENST00000559858 MAGI3Q5TCQ9 1506 aa8.47□□□□□ -1.05
ZEB1-217ENST00000559858 NLRP1Q9C000 1473 aa8.47□□□□□ -1.05
ZEB1-217ENST00000559858 A0A0U1RQG5 324 aaPredicted RBP8.46□□□□□ -1.05
ZEB1-217ENST00000559858 KIAA1107Q9UPP5 1409 aa8.46□□□□□ -1.06
ZEB1-217ENST00000559858 PER1O15534 1290 aaPredicted RBP8.46□□□□□ -1.06
ZEB1-217ENST00000559858 PZPP20742 1482 aa8.46□□□□□ -1.06
ZEB1-217ENST00000559858 DAPK1P53355 1430 aa8.46□□□□□ -1.06
ZEB1-217ENST00000559858 CUL7Q14999 1698 aa8.46□□□□□ -1.06
ZEB1-217ENST00000559858 IGHDP01880 384 aa8.45□□□□□ -1.06
ZEB1-217ENST00000559858 ADRA2BP18089 450 aa8.45□□□□□ -1.06
ZEB1-217ENST00000559858 GOLGA2Q08379 1002 aa8.45□□□□□ -1.06
ZEB1-217ENST00000559858 CC2D2AQ9P2K1 1620 aa8.45□□□□□ -1.06
ZEB1-217ENST00000559858 OFD1O75665 1012 aa8.45□□□□□ -1.06
ZEB1-217ENST00000559858 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.45□□□□□ -1.06
ZEB1-217ENST00000559858 GAPVD1Q14C86 1478 aa8.44□□□□□ -1.06
ZEB1-217ENST00000559858 FGD1P98174 961 aa8.44□□□□□ -1.06
ZEB1-217ENST00000559858 SMAP1Q8IYB5 467 aaPredicted RBP8.44□□□□□ -1.06
ZEB1-217ENST00000559858 ZMYM3Q14202 1370 aa8.44□□□□□ -1.06
ZEB1-217ENST00000559858 CGNL1Q0VF96 1302 aa8.44□□□□□ -1.06
ZEB1-217ENST00000559858 ADAMTS8Q9UP79 889 aa8.44□□□□□ -1.06
ZEB1-217ENST00000559858 ABCC5O15440 1437 aa8.44□□□□□ -1.06
ZEB1-217ENST00000559858 RIPK4P57078 832 aa8.43□□□□□ -1.06
ZEB1-217ENST00000559858 ZSCAN30Q86W11 494 aa8.43□□□□□ -1.06
ZEB1-217ENST00000559858 ZNF521Q96K83 1311 aa8.43□□□□□ -1.06
ZEB1-217ENST00000559858 SLFN5Q08AF3 891 aa8.43□□□□□ -1.06
ZEB1-217ENST00000559858 CCDC173Q0VFZ6 552 aa8.43□□□□□ -1.06
ZEB1-217ENST00000559858 PKD2Q13563 968 aa8.43□□□□□ -1.06
ZEB1-217ENST00000559858 CC2D1BQ5T0F9 858 aaKnown RBP8.43□□□□□ -1.06
ZEB1-217ENST00000559858 MTERF4Q7Z6M4 381 aaKnown RBP8.43□□□□□ -1.06
ZEB1-217ENST00000559858 SPRYD3Q8NCJ5 442 aa8.43□□□□□ -1.06
ZEB1-217ENST00000559858 PLEKHH1Q9ULM0 1364 aa8.43□□□□□ -1.06
ZEB1-217ENST00000559858 ARHGEF12Q9NZN5 1544 aa8.42□□□□□ -1.06
ZEB1-217ENST00000559858 ZNF608Q9ULD9 1512 aaPredicted RBP8.42□□□□□ -1.06
ZEB1-217ENST00000559858 PTMSP20962 102 aa8.42□□□□□ -1.06
ZEB1-217ENST00000559858 PDE3AQ14432 1141 aa8.42□□□□□ -1.06
ZEB1-217ENST00000559858 SKOR2Q2VWA4 1001 aaPredicted RBP8.42□□□□□ -1.06
ZEB1-217ENST00000559858 PPP1R9BQ96SB3 815 aa8.42□□□□□ -1.06
ZEB1-217ENST00000559858 CCDC144AA2RUR9 1427 aa8.41□□□□□ -1.06
ZEB1-217ENST00000559858 ABCA10Q8WWZ4 1543 aa8.41□□□□□ -1.06
ZEB1-217ENST00000559858 DNMT1P26358 1616 aaKnown RBP8.41□□□□□ -1.06
ZEB1-217ENST00000559858 WDR43Q15061 677 aaKnown RBP eCLIP8.41□□□□□ -1.06
ZEB1-217ENST00000559858 TRMT2AQ8IZ69 625 aaKnown RBP8.41□□□□□ -1.06
ZEB1-217ENST00000559858 KIF21AQ7Z4S6 1674 aa8.41□□□□□ -1.06
ZEB1-217ENST00000559858 ANP32BQ92688 251 aaKnown RBP8.41□□□□□ -1.06
ZEB1-217ENST00000559858 CLUAP1Q96AJ1 413 aa8.41□□□□□ -1.06
ZEB1-217ENST00000559858 MSNP26038 577 aaKnown RBP8.4□□□□□ -1.06
ZEB1-217ENST00000559858 GAS2L3Q86XJ1 694 aa8.4□□□□□ -1.06
ZEB1-217ENST00000559858 FAM13BQ9NYF5 915 aa8.4□□□□□ -1.06
ZEB1-217ENST00000559858 NINLQ9Y2I6 1382 aa8.4□□□□□ -1.06
ZEB1-217ENST00000559858 PMFBP1Q8TBY8 1022 aa8.4□□□□□ -1.06
ZEB1-217ENST00000559858 KDM2AQ9Y2K7 1162 aa8.4□□□□□ -1.06
ZEB1-217ENST00000559858 BCAR3O75815 825 aa8.39□□□□□ -1.07
ZEB1-217ENST00000559858 NKTRP30414 1462 aaKnown RBP8.39□□□□□ -1.07
ZEB1-217ENST00000559858 EPRSP07814 1512 aaKnown RBP8.39□□□□□ -1.07
ZEB1-217ENST00000559858 CADPSQ9ULU8 1353 aa8.39□□□□□ -1.07
ZEB1-217ENST00000559858 HSCBQ8IWL3 235 aa8.38□□□□□ -1.07
ZEB1-217ENST00000559858 GBP4Q96PP9 640 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms