RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 HRO43593 1189 aa10.9□□□□□ -0.66
CTDSPL2-207ENST00000559738 VPS9D1Q9Y2B5 631 aa10.9□□□□□ -0.66
CTDSPL2-207ENST00000559738 SPDYE16A6NNV3 312 aaPredicted RBP10.88□□□□□ -0.67
CTDSPL2-207ENST00000559738 EPAS1Q99814 870 aa10.88□□□□□ -0.67
CTDSPL2-207ENST00000559738 ARHGEF1Q92888 912 aaKnown RBP10.87□□□□□ -0.67
CTDSPL2-207ENST00000559738 ZBED2Q9BTP6 218 aa10.87□□□□□ -0.67
CTDSPL2-207ENST00000559738 NBR1Q14596 966 aa10.86□□□□□ -0.67
CTDSPL2-207ENST00000559738 RBM33Q96EV2 1170 aaKnown RBP10.86□□□□□ -0.67
CTDSPL2-207ENST00000559738 SLC4A5Q9BY07 1137 aa10.86□□□□□ -0.67
CTDSPL2-207ENST00000559738 PPP1R3GB7ZBB8 358 aa10.85□□□□□ -0.67
CTDSPL2-207ENST00000559738 STAC3Q96MF2 364 aa10.85□□□□□ -0.67
CTDSPL2-207ENST00000559738 COL9A1P20849 921 aa10.84□□□□□ -0.67
CTDSPL2-207ENST00000559738 P3H3Q8IVL6 736 aa10.84□□□□□ -0.67
CTDSPL2-207ENST00000559738 C6orf132Q5T0Z8 1188 aa10.83□□□□□ -0.68
CTDSPL2-207ENST00000559738 GRXCR2A6NFK2 248 aa10.81□□□□□ -0.68
CTDSPL2-207ENST00000559738 PROX2Q3B8N5 592 aa10.81□□□□□ -0.68
CTDSPL2-207ENST00000559738 MAP3K7O43318 606 aa10.8□□□□□ -0.68
CTDSPL2-207ENST00000559738 EN1Q05925 392 aaPredicted RBP10.8□□□□□ -0.68
CTDSPL2-207ENST00000559738 KCTD12Q96CX2 325 aaKnown RBP10.79□□□□□ -0.68
CTDSPL2-207ENST00000559738 BHMG1C9JSJ3 638 aaPredicted RBP10.78□□□□□ -0.68
CTDSPL2-207ENST00000559738 TSR1Q2NL82 804 aaKnown RBP10.78□□□□□ -0.68
CTDSPL2-207ENST00000559738 MRPL50Q8N5N7 158 aaKnown RBP10.77□□□□□ -0.69
CTDSPL2-207ENST00000559738 NBPF3Q9H094 633 aa10.77□□□□□ -0.69
CTDSPL2-207ENST00000559738 PRIM1P49642 420 aaKnown RBP10.76□□□□□ -0.69
CTDSPL2-207ENST00000559738 MLLT3P42568 568 aaPredicted RBP10.75□□□□□ -0.69
CTDSPL2-207ENST00000559738 RABGEF1Q9UJ41 708 aa10.75□□□□□ -0.69
CTDSPL2-207ENST00000559738 SEMA3EO15041 775 aa10.74□□□□□ -0.69
CTDSPL2-207ENST00000559738 HCSTQ9UBK5 93 aa10.74□□□□□ -0.69
CTDSPL2-207ENST00000559738 GOLGA8CPA6NN73 597 aa10.73□□□□□ -0.69
CTDSPL2-207ENST00000559738 OSBPP22059 807 aa10.73□□□□□ -0.69
CTDSPL2-207ENST00000559738 KIAA1468Q9P260 1216 aa10.72□□□□□ -0.69
CTDSPL2-207ENST00000559738 TRIM6-TRIM34B2RNG4 842 aa10.71□□□□□ -0.69
CTDSPL2-207ENST00000559738 WNT2BQ93097 391 aa10.69□□□□□ -0.7
CTDSPL2-207ENST00000559738 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
CTDSPL2-207ENST00000559738 ONECUT3O60422 494 aaPredicted RBP10.68□□□□□ -0.7
CTDSPL2-207ENST00000559738 PTPN5P54829 565 aa10.68□□□□□ -0.7
CTDSPL2-207ENST00000559738 SEPT9Q9UHD8 586 aaPredicted RBP10.68□□□□□ -0.7
CTDSPL2-207ENST00000559738 TESPA1A2RU30 521 aaPredicted RBP10.67□□□□□ -0.7
CTDSPL2-207ENST00000559738 THSD4Q6ZMP0 1018 aa10.67□□□□□ -0.7
CTDSPL2-207ENST00000559738 SLC24A1O60721 1099 aa10.66□□□□□ -0.7
CTDSPL2-207ENST00000559738 TSKSQ9UJT2 592 aa10.66□□□□□ -0.7
CTDSPL2-207ENST00000559738 LAPTM4BQ86VI4 370 aa10.65□□□□□ -0.7
CTDSPL2-207ENST00000559738 CERKQ8TCT0 537 aa10.65□□□□□ -0.7
CTDSPL2-207ENST00000559738 CDCA7LQ96GN5 454 aa10.65□□□□□ -0.7
CTDSPL2-207ENST00000559738 PRSS12P56730 875 aa10.64□□□□□ -0.71
CTDSPL2-207ENST00000559738 ANKK1Q8NFD2 765 aa10.64□□□□□ -0.71
CTDSPL2-207ENST00000559738 PACS2Q86VP3 889 aa10.63□□□□□ -0.71
CTDSPL2-207ENST00000559738 ZFRQ96KR1 1074 aaKnown RBP10.62□□□□□ -0.71
CTDSPL2-207ENST00000559738 FAM198AQ9UFP1 575 aa10.62□□□□□ -0.71
CTDSPL2-207ENST00000559738 BCAMP50895 628 aa10.61□□□□□ -0.71
CTDSPL2-207ENST00000559738 FAM98CQ17RN3 349 aaKnown RBP10.61□□□□□ -0.71
CTDSPL2-207ENST00000559738 PLA2G2EQ9NZK7 142 aa10.6□□□□□ -0.71
CTDSPL2-207ENST00000559738 SMAPO00193 183 aa10.58□□□□□ -0.72
CTDSPL2-207ENST00000559738 NPDC1Q9NQX5 325 aaPredicted RBP10.58□□□□□ -0.72
CTDSPL2-207ENST00000559738 SOWAHBA6NEL2 793 aa10.57□□□□□ -0.72
CTDSPL2-207ENST00000559738 NBPF26B4DH59 902 aa10.57□□□□□ -0.72
CTDSPL2-207ENST00000559738 C3orf80F5H4A9 247 aa10.57□□□□□ -0.72
CTDSPL2-207ENST00000559738 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
CTDSPL2-207ENST00000559738 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
CTDSPL2-207ENST00000559738 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
CTDSPL2-207ENST00000559738 PNMA3Q9UL41 463 aa10.56□□□□□ -0.72
CTDSPL2-207ENST00000559738 TATDN2Q93075 761 aa10.55□□□□□ -0.72
CTDSPL2-207ENST00000559738 SMYD5Q6GMV2 418 aa10.54□□□□□ -0.72
CTDSPL2-207ENST00000559738 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
CTDSPL2-207ENST00000559738 NUDT18Q6ZVK8 323 aa10.53□□□□□ -0.72
CTDSPL2-207ENST00000559738 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.53□□□□□ -0.72
CTDSPL2-207ENST00000559738 NUTM2FA1L443 756 aa10.52□□□□□ -0.73
CTDSPL2-207ENST00000559738 PTGDRQ13258 359 aa10.52□□□□□ -0.73
CTDSPL2-207ENST00000559738 TTC13Q8NBP0 860 aa10.52□□□□□ -0.73
CTDSPL2-207ENST00000559738 WBP1LQ9NX94 342 aa10.51□□□□□ -0.73
CTDSPL2-207ENST00000559738 SAMD7Q7Z3H4 446 aa10.5□□□□□ -0.73
CTDSPL2-207ENST00000559738 HPS5Q9UPZ3 1129 aa10.5□□□□□ -0.73
CTDSPL2-207ENST00000559738 TSR3Q9UJK0 312 aaKnown RBP10.48□□□□□ -0.73
CTDSPL2-207ENST00000559738 GPR37O15354 613 aa10.47□□□□□ -0.73
CTDSPL2-207ENST00000559738 NYAP1Q6ZVC0 841 aa10.46□□□□□ -0.73
CTDSPL2-207ENST00000559738 RNF40O75150 1001 aa10.45□□□□□ -0.74
CTDSPL2-207ENST00000559738 FCHSD2O94868 740 aa10.45□□□□□ -0.74
CTDSPL2-207ENST00000559738 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.45□□□□□ -0.74
CTDSPL2-207ENST00000559738 PPP4CP60510 307 aa10.43□□□□□ -0.74
CTDSPL2-207ENST00000559738 HDGFP51858 240 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-207ENST00000559738 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
CTDSPL2-207ENST00000559738 EYA1Q99502 592 aa10.42□□□□□ -0.74
CTDSPL2-207ENST00000559738 TULP1O00294 542 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL2-207ENST00000559738 FAM161AQ3B820 660 aa10.41□□□□□ -0.74
CTDSPL2-207ENST00000559738 SWT1Q5T5J6 900 aaKnown RBP10.41□□□□□ -0.74
CTDSPL2-207ENST00000559738 FECHP22830 423 aa10.4□□□□□ -0.74
CTDSPL2-207ENST00000559738 HIC1Q14526 733 aa10.4□□□□□ -0.74
CTDSPL2-207ENST00000559738 ADGRG1Q9Y653 693 aa10.4□□□□□ -0.74
CTDSPL2-207ENST00000559738 ITGBL1O95965 494 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL2-207ENST00000559738 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
CTDSPL2-207ENST00000559738 LMOD2Q6P5Q4 547 aa10.39□□□□□ -0.75
CTDSPL2-207ENST00000559738 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-207ENST00000559738 GNPATO15228 680 aa10.38□□□□□ -0.75
CTDSPL2-207ENST00000559738 DNAJB2P25686 324 aa10.36□□□□□ -0.75
CTDSPL2-207ENST00000559738 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
CTDSPL2-207ENST00000559738 A0A0G2JS52 829 aa10.34□□□□□ -0.75
CTDSPL2-207ENST00000559738 KCNC4Q03721 635 aa10.34□□□□□ -0.75
CTDSPL2-207ENST00000559738 RCCD1A6NED2 376 aa10.33□□□□□ -0.76
CTDSPL2-207ENST00000559738 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
CTDSPL2-207ENST00000559738 APLP1P51693 650 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms