RNA–Protein interactions for RNA: ENST00000559327.1

IGDCC4-204, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 1 (best)

Gene IGDCC4, Length 5,544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-204ENST00000559327 COG3Q96JB2 828 aa24.79■■□□□ 1.56
IGDCC4-204ENST00000559327 USP47Q96K76 1375 aa24.78■■□□□ 1.56
IGDCC4-204ENST00000559327 KIF21BO75037 1637 aa24.78■■□□□ 1.56
IGDCC4-204ENST00000559327 FYCO1Q9BQS8 1478 aa24.78■■□□□ 1.56
IGDCC4-204ENST00000559327 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.78■■□□□ 1.56
IGDCC4-204ENST00000559327 STAC3Q96MF2 364 aa24.77■■□□□ 1.56
IGDCC4-204ENST00000559327 HMMRO75330 724 aa24.77■■□□□ 1.56
IGDCC4-204ENST00000559327 IFT140Q96RY7 1462 aa24.77■■□□□ 1.56
IGDCC4-204ENST00000559327 GOLGA6L4A6NEF3 574 aa24.76■■□□□ 1.55
IGDCC4-204ENST00000559327 CENPJQ9HC77 1338 aaPredicted RBP24.76■■□□□ 1.55
IGDCC4-204ENST00000559327 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
IGDCC4-204ENST00000559327 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
IGDCC4-204ENST00000559327 LTV1Q96GA3 475 aaPredicted RBP24.75■■□□□ 1.55
IGDCC4-204ENST00000559327 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
IGDCC4-204ENST00000559327 TMX4Q9H1E5 349 aaPredicted RBP24.73■■□□□ 1.55
IGDCC4-204ENST00000559327 GOLGA6L6A8MZA4 724 aa24.73■■□□□ 1.55
IGDCC4-204ENST00000559327 GLIPR1L2Q4G1C9 344 aa24.73■■□□□ 1.55
IGDCC4-204ENST00000559327 SYNJ2O15056 1496 aa24.73■■□□□ 1.55
IGDCC4-204ENST00000559327 GPATCH3Q96I76 525 aa24.72■■□□□ 1.55
IGDCC4-204ENST00000559327 CC2D2AQ9P2K1 1620 aa24.71■■□□□ 1.55
IGDCC4-204ENST00000559327 MINK1Q8N4C8 1332 aaPredicted RBP24.71■■□□□ 1.55
IGDCC4-204ENST00000559327 NCOA2Q15596 1464 aa24.7■■□□□ 1.54
IGDCC4-204ENST00000559327 ZNF644Q9H582 1327 aaPredicted RBP24.69■■□□□ 1.54
IGDCC4-204ENST00000559327 TCERG1O14776 1098 aaKnown RBP24.68■■□□□ 1.54
IGDCC4-204ENST00000559327 TAF7LQ5H9L4 462 aa24.68■■□□□ 1.54
IGDCC4-204ENST00000559327 ARHGAP5Q13017 1502 aa24.68■■□□□ 1.54
IGDCC4-204ENST00000559327 PRG4Q92954 1404 aaPredicted RBP24.68■■□□□ 1.54
IGDCC4-204ENST00000559327 TULP1O00294 542 aaPredicted RBP24.68■■□□□ 1.54
IGDCC4-204ENST00000559327 GORABQ5T7V8 394 aa24.68■■□□□ 1.54
IGDCC4-204ENST00000559327 ANKRD50Q9ULJ7 1429 aa24.68■■□□□ 1.54
IGDCC4-204ENST00000559327 CHMP3Q9Y3E7 222 aa24.67■■□□□ 1.54
IGDCC4-204ENST00000559327 SLC4A10Q6U841 1118 aa24.66■■□□□ 1.54
IGDCC4-204ENST00000559327 NESP48681 1621 aa24.65■■□□□ 1.54
IGDCC4-204ENST00000559327 PLCB2Q00722 1185 aa24.65■■□□□ 1.54
IGDCC4-204ENST00000559327 EFCAB5A4FU69 1503 aa24.64■■□□□ 1.54
IGDCC4-204ENST00000559327 C1orf141Q5JVX7 400 aa24.64■■□□□ 1.53
IGDCC4-204ENST00000559327 DNTTIP2Q5QJE6 756 aaKnown RBP24.64■■□□□ 1.53
IGDCC4-204ENST00000559327 SYNJ1O43426 1573 aa24.64■■□□□ 1.53
IGDCC4-204ENST00000559327 NRDCO43847 1150 aa24.63■■□□□ 1.53
IGDCC4-204ENST00000559327 ISY1Q9ULR0 285 aaKnown RBP24.63■■□□□ 1.53
IGDCC4-204ENST00000559327 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
IGDCC4-204ENST00000559327 GNL2Q13823 731 aaKnown RBP24.62■■□□□ 1.53
IGDCC4-204ENST00000559327 CLUAP1Q96AJ1 413 aa24.61■■□□□ 1.53
IGDCC4-204ENST00000559327 PRKRIP1Q9H875 184 aaPredicted RBP24.61■■□□□ 1.53
IGDCC4-204ENST00000559327 RRP7AQ9Y3A4 280 aaKnown RBP24.59■■□□□ 1.53
IGDCC4-204ENST00000559327 E9PSI1 815 aa24.58■■□□□ 1.53
IGDCC4-204ENST00000559327 EVA1CP58658 441 aa24.58■■□□□ 1.52
IGDCC4-204ENST00000559327 TOP2BQ02880 1626 aa24.57■■□□□ 1.52
IGDCC4-204ENST00000559327 TRIM6-TRIM34B2RNG4 842 aa24.56■■□□□ 1.52
IGDCC4-204ENST00000559327 SPRYD3Q8NCJ5 442 aa24.56■■□□□ 1.52
IGDCC4-204ENST00000559327 PTMSP20962 102 aa24.55■■□□□ 1.52
IGDCC4-204ENST00000559327 MIA2Q96PC5 1412 aa24.55■■□□□ 1.52
IGDCC4-204ENST00000559327 DIAPH1O60610 1272 aaKnown RBP24.54■■□□□ 1.52
IGDCC4-204ENST00000559327 NGEFQ8N5V2 710 aa24.54■■□□□ 1.52
IGDCC4-204ENST00000559327 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
IGDCC4-204ENST00000559327 PSME1Q06323 249 aa24.54■■□□□ 1.52
IGDCC4-204ENST00000559327 TEFQ10587 303 aa24.54■■□□□ 1.52
IGDCC4-204ENST00000559327 PLEKHH2Q8IVE3 1493 aa24.54■■□□□ 1.52
IGDCC4-204ENST00000559327 EHBP1L1Q8N3D4 1523 aa24.52■■□□□ 1.52
IGDCC4-204ENST00000559327 GTF2E1P29083 439 aaPredicted RBP24.51■■□□□ 1.51
IGDCC4-204ENST00000559327 GBP4Q96PP9 640 aa24.51■■□□□ 1.51
IGDCC4-204ENST00000559327 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
IGDCC4-204ENST00000559327 HTATSF1O43719 755 aaKnown RBP24.51■■□□□ 1.51
IGDCC4-204ENST00000559327 RRBP1Q9P2E9 1410 aaKnown RBP24.51■■□□□ 1.51
IGDCC4-204ENST00000559327 DNMBPQ6XZF7 1577 aa24.51■■□□□ 1.51
IGDCC4-204ENST00000559327 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
IGDCC4-204ENST00000559327 AFAP1Q8N556 730 aa24.5■■□□□ 1.51
IGDCC4-204ENST00000559327 MFAP1P55081 439 aaKnown RBP24.48■■□□□ 1.51
IGDCC4-204ENST00000559327 ZKSCAN2Q63HK3 967 aa24.48■■□□□ 1.51
IGDCC4-204ENST00000559327 TTC5Q8N0Z6 440 aa24.48■■□□□ 1.51
IGDCC4-204ENST00000559327 RBM19Q9Y4C8 960 aaKnown RBP24.48■■□□□ 1.51
IGDCC4-204ENST00000559327 G3V3G9 751 aa24.47■■□□□ 1.51
IGDCC4-204ENST00000559327 DCAF8Q5TAQ9 597 aa24.47■■□□□ 1.51
IGDCC4-204ENST00000559327 ZBED9Q6R2W3 1325 aa24.46■■□□□ 1.51
IGDCC4-204ENST00000559327 L1TD1Q5T7N2 865 aaKnown RBP24.46■■□□□ 1.51
IGDCC4-204ENST00000559327 PRXQ9BXM0 1461 aa24.46■■□□□ 1.51
IGDCC4-204ENST00000559327 HECW1Q76N89 1606 aa24.46■■□□□ 1.51
IGDCC4-204ENST00000559327 ATF3P18847 181 aa24.44■■□□□ 1.5
IGDCC4-204ENST00000559327 ELL2O00472 640 aaPredicted RBP24.44■■□□□ 1.5
IGDCC4-204ENST00000559327 TROQ12816 1431 aaPredicted RBP24.43■■□□□ 1.5
IGDCC4-204ENST00000559327 APAF1O14727 1248 aa24.42■■□□□ 1.5
IGDCC4-204ENST00000559327 CCDC7Q96M83 1385 aa24.42■■□□□ 1.5
IGDCC4-204ENST00000559327 NEXNQ0ZGT2 675 aa24.41■■□□□ 1.5
IGDCC4-204ENST00000559327 HSP90B1P14625 803 aaKnown RBP24.41■■□□□ 1.5
IGDCC4-204ENST00000559327 HFM1A2PYH4 1435 aa24.41■■□□□ 1.5
IGDCC4-204ENST00000559327 C9orf84Q5VXU9 1444 aa24.4■■□□□ 1.5
IGDCC4-204ENST00000559327 FRAT2O75474 233 aaPredicted RBP24.4■■□□□ 1.5
IGDCC4-204ENST00000559327 CENPQQ7L2Z9 268 aaPredicted RBP24.4■■□□□ 1.5
IGDCC4-204ENST00000559327 RUNDC1Q96C34 613 aa24.39■■□□□ 1.49
IGDCC4-204ENST00000559327 RIPK4P57078 832 aa24.39■■□□□ 1.49
IGDCC4-204ENST00000559327 KIF7Q2M1P5 1343 aa24.38■■□□□ 1.49
IGDCC4-204ENST00000559327 BCL2L13Q9BXK5 485 aa24.38■■□□□ 1.49
IGDCC4-204ENST00000559327 RRP1P56182 461 aaKnown RBP24.37■■□□□ 1.49
IGDCC4-204ENST00000559327 DRC7Q8IY82 874 aa24.36■■□□□ 1.49
IGDCC4-204ENST00000559327 SYAP1Q96A49 352 aaPredicted RBP24.36■■□□□ 1.49
IGDCC4-204ENST00000559327 API5Q9BZZ5 524 aaKnown RBP24.35■■□□□ 1.49
IGDCC4-204ENST00000559327 CLSTN1O94985 981 aa24.34■■□□□ 1.49
IGDCC4-204ENST00000559327 SLKQ9H2G2 1235 aaPredicted RBP24.34■■□□□ 1.49
IGDCC4-204ENST00000559327 CABP2Q9NPB3 220 aa24.34■■□□□ 1.49
IGDCC4-204ENST00000559327 TMEM132EQ6IEE7 984 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms