RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 RNF123Q5XPI4 1314 aa22.49■■□□□ 1.19
SPG11-215ENST00000559193 E9PCH4 1651 aa22.49■■□□□ 1.19
SPG11-215ENST00000559193 CDC42BPBQ9Y5S2 1711 aa22.49■■□□□ 1.19
SPG11-215ENST00000559193 TMC1Q8TDI8 760 aa22.46■■□□□ 1.19
SPG11-215ENST00000559193 LRPPRCP42704 1394 aaKnown RBP22.45■■□□□ 1.18
SPG11-215ENST00000559193 TRPM1Q7Z4N2 1603 aa22.43■■□□□ 1.18
SPG11-215ENST00000559193 PRAG1Q86YV5 1406 aa22.43■■□□□ 1.18
SPG11-215ENST00000559193 BRD4O60885 1362 aaPredicted RBP22.42■■□□□ 1.18
SPG11-215ENST00000559193 KTN1Q86UP2 1357 aaKnown RBP22.42■■□□□ 1.18
SPG11-215ENST00000559193 MYBBP1AQ9BQG0 1328 aaKnown RBP22.42■■□□□ 1.18
SPG11-215ENST00000559193 SENP3-EIF4A1A0A087X0R7 540 aa22.42■■□□□ 1.18
SPG11-215ENST00000559193 SYCP2Q9BX26 1530 aa22.41■■□□□ 1.18
SPG11-215ENST00000559193 UNC13BO14795 1591 aa22.41■■□□□ 1.18
SPG11-215ENST00000559193 CCDC144AA2RUR9 1427 aa22.4■■□□□ 1.18
SPG11-215ENST00000559193 MAST1Q9Y2H9 1570 aa22.39■■□□□ 1.18
SPG11-215ENST00000559193 RALBP1Q15311 655 aa22.39■■□□□ 1.17
SPG11-215ENST00000559193 RSPH4AQ5TD94 716 aa22.39■■□□□ 1.17
SPG11-215ENST00000559193 TTC37Q6PGP7 1564 aa22.39■■□□□ 1.17
SPG11-215ENST00000559193 PLA2R1Q13018 1463 aa22.38■■□□□ 1.17
SPG11-215ENST00000559193 A2MP01023 1474 aa22.35■■□□□ 1.17
SPG11-215ENST00000559193 ARHGAP5Q13017 1502 aa22.35■■□□□ 1.17
SPG11-215ENST00000559193 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.34■■□□□ 1.177e-9■■■□□ 17.9
SPG11-215ENST00000559193 GPRASP1Q5JY77 1395 aa22.34■■□□□ 1.17
SPG11-215ENST00000559193 PARD3Q8TEW0 1356 aa22.33■■□□□ 1.16
SPG11-215ENST00000559193 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.16
SPG11-215ENST00000559193 PLXNC1O60486 1568 aa22.32■■□□□ 1.16
SPG11-215ENST00000559193 NBPF1Q3BBV0 1214 aa22.32■■□□□ 1.16
SPG11-215ENST00000559193 IQGAP3Q86VI3 1631 aa22.32■■□□□ 1.16
SPG11-215ENST00000559193 CCDC136Q96JN2 1154 aa22.32■■□□□ 1.16
SPG11-215ENST00000559193 LAMC1P11047 1609 aa22.32■■□□□ 1.16
SPG11-215ENST00000559193 RGL3Q3MIN7 710 aa22.31■■□□□ 1.16
SPG11-215ENST00000559193 COL17A1Q9UMD9 1497 aaPredicted RBP22.3■■□□□ 1.16
SPG11-215ENST00000559193 PRDM15P57071 1507 aaPredicted RBP22.3■■□□□ 1.16
SPG11-215ENST00000559193 CHD1O14646 1710 aa22.29■■□□□ 1.16
SPG11-215ENST00000559193 PLEKHH2Q8IVE3 1493 aa22.29■■□□□ 1.16
SPG11-215ENST00000559193 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
SPG11-215ENST00000559193 NLRP13Q86W25 1043 aa22.28■■□□□ 1.16
SPG11-215ENST00000559193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.28■■□□□ 1.162e-8■■■■□ 21.1
SPG11-215ENST00000559193 MYO5CQ9NQX4 1742 aa22.27■■□□□ 1.16
SPG11-215ENST00000559193 PER1O15534 1290 aaPredicted RBP22.27■■□□□ 1.16
SPG11-215ENST00000559193 DISP3Q9P2K9 1392 aa22.25■■□□□ 1.15
SPG11-215ENST00000559193 MAGI2Q86UL8 1455 aa22.25■■□□□ 1.15
SPG11-215ENST00000559193 EIF2AK4Q9P2K8 1649 aaKnown RBP22.25■■□□□ 1.15
SPG11-215ENST00000559193 TESK2Q96S53 571 aa22.24■■□□□ 1.15
SPG11-215ENST00000559193 ABCC2Q92887 1545 aa22.24■■□□□ 1.15
SPG11-215ENST00000559193 ATP10AO60312 1499 aa22.24■■□□□ 1.15
SPG11-215ENST00000559193 DUOX2Q9NRD8 1548 aa22.23■■□□□ 1.15
SPG11-215ENST00000559193 RRP1P56182 461 aaKnown RBP22.22■■□□□ 1.15
SPG11-215ENST00000559193 ERCC6L2Q5T890 1561 aa22.22■■□□□ 1.15
SPG11-215ENST00000559193 ERBINQ96RT1 1412 aa22.21■■□□□ 1.15
SPG11-215ENST00000559193 RNF17Q9BXT8 1623 aaKnown RBP22.18■■□□□ 1.14
SPG11-215ENST00000559193 WASHC2CQ9Y4E1 1318 aa22.18■■□□□ 1.14
SPG11-215ENST00000559193 RCAN3Q9UKA8 241 aa22.17■■□□□ 1.14
SPG11-215ENST00000559193 SALL2Q9Y467 1007 aaPredicted RBP22.17■■□□□ 1.14
SPG11-215ENST00000559193 PDE3BQ13370 1112 aa22.16■■□□□ 1.14
SPG11-215ENST00000559193 CC2D1BQ5T0F9 858 aaKnown RBP22.15■■□□□ 1.14
SPG11-215ENST00000559193 BLMP54132 1417 aaPredicted RBP22.15■■□□□ 1.14
SPG11-215ENST00000559193 PANK3Q9H999 370 aa22.15■■□□□ 1.14
SPG11-215ENST00000559193 EXOC6Q8TAG9 804 aa22.14■■□□□ 1.14
SPG11-215ENST00000559193 ZMYM4Q5VZL5 1548 aa22.14■■□□□ 1.13
SPG11-215ENST00000559193 PLCH2O75038 1416 aa22.14■■□□□ 1.13
SPG11-215ENST00000559193 NOP58Q9Y2X3 529 aaKnown RBP22.14■■□□□ 1.13
SPG11-215ENST00000559193 INSRP06213 1382 aa22.13■■□□□ 1.13
SPG11-215ENST00000559193 TMF1P82094 1093 aa22.12■■□□□ 1.13
SPG11-215ENST00000559193 ABCC1P33527 1531 aa22.12■■□□□ 1.13
SPG11-215ENST00000559193 BCL11AQ9H165 835 aa22.12■■□□□ 1.13
SPG11-215ENST00000559193 CDCA7LQ96GN5 454 aa22.11■■□□□ 1.13
SPG11-215ENST00000559193 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
SPG11-215ENST00000559193 PAK3O75914 559 aaPredicted RBP22.09■■□□□ 1.13
SPG11-215ENST00000559193 TRAPPC8Q9Y2L5 1435 aa22.09■■□□□ 1.13
SPG11-215ENST00000559193 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
SPG11-215ENST00000559193 EFCAB2Q5VUJ9 269 aa22.07■■□□□ 1.12
SPG11-215ENST00000559193 IQGAP1P46940 1657 aa22.06■■□□□ 1.12
SPG11-215ENST00000559193 WDR7Q9Y4E6 1490 aa22.06■■□□□ 1.12
SPG11-215ENST00000559193 ANP32AP39687 249 aaKnown RBP22.05■■□□□ 1.12
SPG11-215ENST00000559193 IPO9Q96P70 1041 aaKnown RBP22.04■■□□□ 1.12
SPG11-215ENST00000559193 TRPM2O94759 1503 aa22.04■■□□□ 1.12
SPG11-215ENST00000559193 UHRF1BP1LA0JNW5 1464 aa22.02■■□□□ 1.12
SPG11-215ENST00000559193 SPHKAPQ2M3C7 1700 aa22.02■■□□□ 1.12
SPG11-215ENST00000559193 MYT1LQ9UL68 1186 aa22.01■■□□□ 1.11
SPG11-215ENST00000559193 ZFYVE16Q7Z3T8 1539 aa22.01■■□□□ 1.11
SPG11-215ENST00000559193 CEP152O94986 1710 aa22■■□□□ 1.11
SPG11-215ENST00000559193 CLTCL1P53675 1640 aa21.99■■□□□ 1.11
SPG11-215ENST00000559193 TCERG1O14776 1098 aaKnown RBP21.98■■□□□ 1.11
SPG11-215ENST00000559193 PTPRTO14522 1441 aa21.98■■□□□ 1.11
SPG11-215ENST00000559193 RTEL1-TNFRSF6BF6WH68 1400 aa21.98■■□□□ 1.11
SPG11-215ENST00000559193 PLIN1O60240 522 aa21.97■■□□□ 1.11
SPG11-215ENST00000559193 SPAG9O60271 1321 aaKnown RBP21.97■■□□□ 1.11
SPG11-215ENST00000559193 SYNMO15061 1565 aa21.97■■□□□ 1.11
SPG11-215ENST00000559193 DEPDC5O75140 1603 aa21.97■■□□□ 1.11
SPG11-215ENST00000559193 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
SPG11-215ENST00000559193 SCAF11Q99590 1463 aaKnown RBP21.97■■□□□ 1.11
SPG11-215ENST00000559193 SCAPERQ9BY12 1400 aa21.97■■□□□ 1.11
SPG11-215ENST00000559193 ADAMTS8Q9UP79 889 aa21.96■■□□□ 1.11
SPG11-215ENST00000559193 PPP2R1AP30153 589 aa21.95■■□□□ 1.1
SPG11-215ENST00000559193 ARAP3Q8WWN8 1544 aa21.95■■□□□ 1.1
SPG11-215ENST00000559193 AMER1Q5JTC6 1135 aaPredicted RBP21.94■■□□□ 1.1
SPG11-215ENST00000559193 KNSTRNQ9Y448 316 aa21.94■■□□□ 1.1
SPG11-215ENST00000559193 AFAP1Q8N556 730 aa21.94■■□□□ 1.1
SPG11-215ENST00000559193 CRBNQ96SW2 442 aa21.93■■□□□ 1.1
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