RNA–Protein interactions for RNA: ENST00000559105.5

USP50-204, Transcript of ubiquitin specific peptidase 50, humanhuman

TSL 5

Gene USP50, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP50-204ENST00000559105 CERKQ8TCT0 537 aa13.59□□□□□ -0.23
USP50-204ENST00000559105 NUTM2FA1L443 756 aa13.58□□□□□ -0.24
USP50-204ENST00000559105 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.58□□□□□ -0.24
USP50-204ENST00000559105 KCNK17Q96T54 332 aa13.57□□□□□ -0.24
USP50-204ENST00000559105 PCDH10Q9P2E7 1040 aa13.56□□□□□ -0.24
USP50-204ENST00000559105 RBM26Q5T8P6 1007 aaKnown RBP13.55□□□□□ -0.24
USP50-204ENST00000559105 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
USP50-204ENST00000559105 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
USP50-204ENST00000559105 PPP1R3GB7ZBB8 358 aa13.53□□□□□ -0.24
USP50-204ENST00000559105 PRIM1P49642 420 aaKnown RBP13.53□□□□□ -0.24
USP50-204ENST00000559105 TSR1Q2NL82 804 aaKnown RBP13.52□□□□□ -0.25
USP50-204ENST00000559105 GPIHBP1Q8IV16 184 aa13.52□□□□□ -0.25
USP50-204ENST00000559105 FCHSD2O94868 740 aa13.51□□□□□ -0.25
USP50-204ENST00000559105 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
USP50-204ENST00000559105 PSEN2P49810 448 aa13.49□□□□□ -0.25
USP50-204ENST00000559105 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
USP50-204ENST00000559105 POTEEQ6S8J3 1075 aa13.47□□□□□ -0.25
USP50-204ENST00000559105 LSM11P83369 360 aaKnown RBP eCLIP13.46□□□□□ -0.25
USP50-204ENST00000559105 PTGDRQ13258 359 aa13.46□□□□□ -0.25
USP50-204ENST00000559105 TK2O00142 265 aa13.45□□□□□ -0.26
USP50-204ENST00000559105 COL9A1P20849 921 aa13.45□□□□□ -0.26
USP50-204ENST00000559105 HIC1Q14526 733 aa13.45□□□□□ -0.26
USP50-204ENST00000559105 CDHR5Q9HBB8 845 aa13.45□□□□□ -0.26
USP50-204ENST00000559105 RBM27Q9P2N5 1060 aaKnown RBP13.45□□□□□ -0.26
USP50-204ENST00000559105 ONECUT3O60422 494 aaPredicted RBP13.44□□□□□ -0.26
USP50-204ENST00000559105 PRSS12P56730 875 aa13.43□□□□□ -0.26
USP50-204ENST00000559105 ZBED2Q9BTP6 218 aa13.43□□□□□ -0.26
USP50-204ENST00000559105 DMRTA1Q5VZB9 504 aa13.42□□□□□ -0.26
USP50-204ENST00000559105 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
USP50-204ENST00000559105 NPDC1Q9NQX5 325 aaPredicted RBP13.42□□□□□ -0.26
USP50-204ENST00000559105 GNPATO15228 680 aa13.4□□□□□ -0.26
USP50-204ENST00000559105 PACS2Q86VP3 889 aa13.4□□□□□ -0.26
USP50-204ENST00000559105 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
USP50-204ENST00000559105 KRTAP3-3Q9BYR6 98 aa13.4□□□□□ -0.26
USP50-204ENST00000559105 KRTAP3-2Q9BYR7 98 aa13.4□□□□□ -0.26
USP50-204ENST00000559105 STAC3Q96MF2 364 aa13.39□□□□□ -0.27
USP50-204ENST00000559105 TRIM6-TRIM34B2RNG4 842 aa13.38□□□□□ -0.27
USP50-204ENST00000559105 VPS9D1Q9Y2B5 631 aa13.38□□□□□ -0.27
USP50-204ENST00000559105 ADGRD1Q6QNK2 874 aa13.37□□□□□ -0.27
USP50-204ENST00000559105 ZC3H15Q8WU90 426 aaKnown RBP13.36□□□□□ -0.27
USP50-204ENST00000559105 RABGEF1Q9UJ41 708 aa13.36□□□□□ -0.27
USP50-204ENST00000559105 NBPF3Q9H094 633 aa13.35□□□□□ -0.27
USP50-204ENST00000559105 GPR37O15354 613 aa13.34□□□□□ -0.27
USP50-204ENST00000559105 PROX2Q3B8N5 592 aa13.34□□□□□ -0.27
USP50-204ENST00000559105 PADI6Q6TGC4 694 aa13.34□□□□□ -0.27
USP50-204ENST00000559105 KIAA1468Q9P260 1216 aa13.33□□□□□ -0.28
USP50-204ENST00000559105 NBPF26B4DH59 902 aa13.32□□□□□ -0.28
USP50-204ENST00000559105 TTC13Q8NBP0 860 aa13.32□□□□□ -0.28
USP50-204ENST00000559105 ZMYND10O75800 440 aa13.31□□□□□ -0.28
USP50-204ENST00000559105 TSKSQ9UJT2 592 aa13.31□□□□□ -0.28
USP50-204ENST00000559105 KRI1Q8N9T8 703 aaKnown RBP13.3□□□□□ -0.28
USP50-204ENST00000559105 BARGINQ6ZT62 677 aa13.29□□□□□ -0.28
USP50-204ENST00000559105 MINK1Q8N4C8 1332 aaPredicted RBP13.29□□□□□ -0.28
USP50-204ENST00000559105 OATP04181 439 aa13.28□□□□□ -0.28
USP50-204ENST00000559105 MAP2K5Q13163 448 aa13.28□□□□□ -0.28
USP50-204ENST00000559105 LAPTM4BQ86VI4 370 aa13.28□□□□□ -0.28
USP50-204ENST00000559105 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
USP50-204ENST00000559105 RBM46Q8TBY0 533 aaKnown RBP13.27□□□□□ -0.29
USP50-204ENST00000559105 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
USP50-204ENST00000559105 HRO43593 1189 aa13.26□□□□□ -0.29
USP50-204ENST00000559105 TATDN2Q93075 761 aa13.26□□□□□ -0.29
USP50-204ENST00000559105 PNMA3Q9UL41 463 aa13.26□□□□□ -0.29
USP50-204ENST00000559105 GOLGA8CPA6NN73 597 aa13.24□□□□□ -0.29
USP50-204ENST00000559105 FECHP22830 423 aa13.24□□□□□ -0.29
USP50-204ENST00000559105 NUDT18Q6ZVK8 323 aa13.24□□□□□ -0.29
USP50-204ENST00000559105 FAM198AQ9UFP1 575 aa13.24□□□□□ -0.29
USP50-204ENST00000559105 IRF6O14896 467 aa13.23□□□□□ -0.29
USP50-204ENST00000559105 ADGRG1Q9Y653 693 aa13.23□□□□□ -0.29
USP50-204ENST00000559105 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
USP50-204ENST00000559105 HDGFP51858 240 aaKnown RBP13.21□□□□□ -0.29
USP50-204ENST00000559105 TPRNQ4KMQ1 711 aa13.2□□□□□ -0.3
USP50-204ENST00000559105 EYA1Q99502 592 aa13.19□□□□□ -0.3
USP50-204ENST00000559105 SEPT9Q9UHD8 586 aaPredicted RBP13.18□□□□□ -0.3
USP50-204ENST00000559105 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
USP50-204ENST00000559105 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
USP50-204ENST00000559105 AK7Q96M32 723 aa13.17□□□□□ -0.3
USP50-204ENST00000559105 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.16□□□□□ -0.3
USP50-204ENST00000559105 METTL3Q86U44 580 aaKnown RBP13.16□□□□□ -0.3
USP50-204ENST00000559105 PXYLP1Q8TE99 480 aa13.16□□□□□ -0.3
USP50-204ENST00000559105 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
USP50-204ENST00000559105 SMAPO00193 183 aa13.15□□□□□ -0.3
USP50-204ENST00000559105 DNAJB2P25686 324 aa13.15□□□□□ -0.3
USP50-204ENST00000559105 CCDC102AQ96A19 550 aa13.15□□□□□ -0.3
USP50-204ENST00000559105 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
USP50-204ENST00000559105 ANKK1Q8NFD2 765 aa13.14□□□□□ -0.31
USP50-204ENST00000559105 ZFRQ96KR1 1074 aaKnown RBP13.14□□□□□ -0.31
USP50-204ENST00000559105 RCCD1A6NED2 376 aa13.11□□□□□ -0.31
USP50-204ENST00000559105 C3orf80F5H4A9 247 aa13.11□□□□□ -0.31
USP50-204ENST00000559105 WNT2BQ93097 391 aa13.11□□□□□ -0.31
USP50-204ENST00000559105 SLC24A3Q9HC58 644 aa13.1□□□□□ -0.31
USP50-204ENST00000559105 LRCH3Q96II8 777 aa13.09□□□□□ -0.31
USP50-204ENST00000559105 NECTIN2Q92692 538 aa13.08□□□□□ -0.32
USP50-204ENST00000559105 TMEM134Q9H6X4 195 aa13.08□□□□□ -0.32
USP50-204ENST00000559105 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.07□□□□□ -0.32
USP50-204ENST00000559105 RSPH4AQ5TD94 716 aa13.06□□□□□ -0.32
USP50-204ENST00000559105 SLF2Q8IX21 1173 aa13.06□□□□□ -0.32
USP50-204ENST00000559105 RNF166Q96A37 237 aaPredicted RBP13.06□□□□□ -0.32
USP50-204ENST00000559105 KCTD12Q96CX2 325 aaKnown RBP13.06□□□□□ -0.32
USP50-204ENST00000559105 SAMD7Q7Z3H4 446 aa13.05□□□□□ -0.32
USP50-204ENST00000559105 DAXXQ9UER7 740 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms