RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 GRXCR2A6NFK2 248 aa10.32□□□□□ -0.76
CASC4-207ENST00000559037 TESPA1A2RU30 521 aaPredicted RBP10.31□□□□□ -0.76
CASC4-207ENST00000559037 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
CASC4-207ENST00000559037 LSM11P83369 360 aaKnown RBP eCLIP10.31□□□□□ -0.76
CASC4-207ENST00000559037 KCNK17Q96T54 332 aa10.31□□□□□ -0.76
CASC4-207ENST00000559037 PPP1R3GB7ZBB8 358 aa10.3□□□□□ -0.76
CASC4-207ENST00000559037 TK2O00142 265 aa10.3□□□□□ -0.76
CASC4-207ENST00000559037 SEMA3EO15041 775 aa10.3□□□□□ -0.76
CASC4-207ENST00000559037 MAP3K7O43318 606 aa10.29□□□□□ -0.76
CASC4-207ENST00000559037 OSBPP22059 807 aa10.29□□□□□ -0.76
CASC4-207ENST00000559037 POTEEQ6S8J3 1075 aa10.29□□□□□ -0.76
CASC4-207ENST00000559037 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
CASC4-207ENST00000559037 SLC4A5Q9BY07 1137 aa10.29□□□□□ -0.76
CASC4-207ENST00000559037 C6orf132Q5T0Z8 1188 aa10.28□□□□□ -0.76
CASC4-207ENST00000559037 MLLT3P42568 568 aaPredicted RBP10.27□□□□□ -0.77
CASC4-207ENST00000559037 PSEN2P49810 448 aa10.25□□□□□ -0.77
CASC4-207ENST00000559037 RBM33Q96EV2 1170 aaKnown RBP10.25□□□□□ -0.77
CASC4-207ENST00000559037 AXIN2Q9Y2T1 843 aa10.25□□□□□ -0.77
CASC4-207ENST00000559037 ONECUT3O60422 494 aaPredicted RBP10.24□□□□□ -0.77
CASC4-207ENST00000559037 RB1CC1Q8TDY2 1594 aa10.22□□□□□ -0.77
CASC4-207ENST00000559037 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
CASC4-207ENST00000559037 ANKRD13DQ6ZTN6 518 aa10.22□□□□□ -0.77
CASC4-207ENST00000559037 ZBED2Q9BTP6 218 aa10.22□□□□□ -0.77
CASC4-207ENST00000559037 RBM27Q9P2N5 1060 aaKnown RBP10.22□□□□□ -0.77
CASC4-207ENST00000559037 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.77
CASC4-207ENST00000559037 TSR1Q2NL82 804 aaKnown RBP10.2□□□□□ -0.78
CASC4-207ENST00000559037 VPS9D1Q9Y2B5 631 aa10.2□□□□□ -0.78
CASC4-207ENST00000559037 NACADO15069 1562 aa10.19□□□□□ -0.78
CASC4-207ENST00000559037 PRIM1P49642 420 aaKnown RBP10.19□□□□□ -0.78
CASC4-207ENST00000559037 COL9A1P20849 921 aa10.18□□□□□ -0.78
CASC4-207ENST00000559037 NBPF3Q9H094 633 aa10.17□□□□□ -0.78
CASC4-207ENST00000559037 RABGEF1Q9UJ41 708 aa10.17□□□□□ -0.78
CASC4-207ENST00000559037 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
CASC4-207ENST00000559037 HRO43593 1189 aa10.16□□□□□ -0.78
CASC4-207ENST00000559037 PRSS12P56730 875 aa10.15□□□□□ -0.78
CASC4-207ENST00000559037 STAC3Q96MF2 364 aa10.15□□□□□ -0.78
CASC4-207ENST00000559037 NUTM2FA1L443 756 aa10.14□□□□□ -0.79
CASC4-207ENST00000559037 FCHSD2O94868 740 aa10.14□□□□□ -0.79
CASC4-207ENST00000559037 PTGDRQ13258 359 aa10.14□□□□□ -0.79
CASC4-207ENST00000559037 PACS2Q86VP3 889 aa10.14□□□□□ -0.79
CASC4-207ENST00000559037 BCANQ96GW7 911 aa10.14□□□□□ -0.79
CASC4-207ENST00000559037 CDHR5Q9HBB8 845 aa10.14□□□□□ -0.79
CASC4-207ENST00000559037 CDCA7LQ96GN5 454 aa10.13□□□□□ -0.79
CASC4-207ENST00000559037 NPDC1Q9NQX5 325 aaPredicted RBP10.13□□□□□ -0.79
CASC4-207ENST00000559037 BHMG1C9JSJ3 638 aaPredicted RBP10.12□□□□□ -0.79
CASC4-207ENST00000559037 RBM26Q5T8P6 1007 aaKnown RBP10.12□□□□□ -0.79
CASC4-207ENST00000559037 LAPTM4BQ86VI4 370 aa10.12□□□□□ -0.79
CASC4-207ENST00000559037 UNC13AQ9UPW8 1703 aa10.11□□□□□ -0.79
CASC4-207ENST00000559037 HIC1Q14526 733 aa10.11□□□□□ -0.79
CASC4-207ENST00000559037 PROX2Q3B8N5 592 aa10.11□□□□□ -0.79
CASC4-207ENST00000559037 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
CASC4-207ENST00000559037 MYT1LQ9UL68 1186 aa10.11□□□□□ -0.79
CASC4-207ENST00000559037 NBPF26B4DH59 902 aa10.1□□□□□ -0.79
CASC4-207ENST00000559037 MRPL50Q8N5N7 158 aaKnown RBP10.1□□□□□ -0.79
CASC4-207ENST00000559037 TTC13Q8NBP0 860 aa10.1□□□□□ -0.79
CASC4-207ENST00000559037 MYO15BQ96JP2 1530 aa10.09□□□□□ -0.79
CASC4-207ENST00000559037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
CASC4-207ENST00000559037 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
CASC4-207ENST00000559037 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
CASC4-207ENST00000559037 LMOD2Q6P5Q4 547 aa10.06□□□□□ -0.8
CASC4-207ENST00000559037 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
CASC4-207ENST00000559037 GNPATO15228 680 aa10.05□□□□□ -0.8
CASC4-207ENST00000559037 GPR37O15354 613 aa10.05□□□□□ -0.8
CASC4-207ENST00000559037 FAM98CQ17RN3 349 aaKnown RBP10.05□□□□□ -0.8
CASC4-207ENST00000559037 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
CASC4-207ENST00000559037 GOLGA8CPA6NN73 597 aa10.04□□□□□ -0.8
CASC4-207ENST00000559037 TATDN2Q93075 761 aa10.03□□□□□ -0.8
CASC4-207ENST00000559037 FAM198AQ9UFP1 575 aa10.01□□□□□ -0.81
CASC4-207ENST00000559037 ZCCHC6Q5VYS8 1495 aaKnown RBP10.01□□□□□ -0.81
CASC4-207ENST00000559037 OATP04181 439 aa10□□□□□ -0.81
CASC4-207ENST00000559037 ANKK1Q8NFD2 765 aa10□□□□□ -0.81
CASC4-207ENST00000559037 RBM46Q8TBY0 533 aaKnown RBP10□□□□□ -0.81
CASC4-207ENST00000559037 PNMA3Q9UL41 463 aa10□□□□□ -0.81
CASC4-207ENST00000559037 DCAF1Q9Y4B6 1507 aa10□□□□□ -0.81
CASC4-207ENST00000559037 ZFRQ96KR1 1074 aaKnown RBP9.99□□□□□ -0.81
CASC4-207ENST00000559037 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
CASC4-207ENST00000559037 WNT2BQ93097 391 aa9.98□□□□□ -0.81
CASC4-207ENST00000559037 SEPT9Q9UHD8 586 aaPredicted RBP9.98□□□□□ -0.81
CASC4-207ENST00000559037 ADGRG1Q9Y653 693 aa9.98□□□□□ -0.81
CASC4-207ENST00000559037 HDGFP51858 240 aaKnown RBP9.96□□□□□ -0.82
CASC4-207ENST00000559037 MAP2K5Q13163 448 aa9.96□□□□□ -0.82
CASC4-207ENST00000559037 NECTIN2Q92692 538 aa9.96□□□□□ -0.82
CASC4-207ENST00000559037 BICRAQ9NZM4 1560 aa9.96□□□□□ -0.82
CASC4-207ENST00000559037 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
CASC4-207ENST00000559037 EYA1Q99502 592 aa9.95□□□□□ -0.82
CASC4-207ENST00000559037 HCSTQ9UBK5 93 aa9.95□□□□□ -0.82
CASC4-207ENST00000559037 MINK1Q8N4C8 1332 aaPredicted RBP9.94□□□□□ -0.82
CASC4-207ENST00000559037 SOWAHBA6NEL2 793 aa9.94□□□□□ -0.82
CASC4-207ENST00000559037 DNAJB2P25686 324 aa9.94□□□□□ -0.82
CASC4-207ENST00000559037 SLC4A3P48751 1232 aa9.94□□□□□ -0.82
CASC4-207ENST00000559037 THSD4Q6ZMP0 1018 aa9.94□□□□□ -0.82
CASC4-207ENST00000559037 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
CASC4-207ENST00000559037 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.93□□□□□ -0.82
CASC4-207ENST00000559037 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
CASC4-207ENST00000559037 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.93□□□□□ -0.82
CASC4-207ENST00000559037 SMAPO00193 183 aa9.92□□□□□ -0.82
CASC4-207ENST00000559037 METTL3Q86U44 580 aaKnown RBP9.92□□□□□ -0.82
CASC4-207ENST00000559037 PXYLP1Q8TE99 480 aa9.92□□□□□ -0.82
CASC4-207ENST00000559037 ZC3H15Q8WU90 426 aaKnown RBP9.92□□□□□ -0.82
CASC4-207ENST00000559037 C3orf80F5H4A9 247 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms