RNA–Protein interactions for RNA: ENST00000558832.5

ZEB1-213, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 570 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-213ENST00000558832 BRPF1P55201 1214 aaPredicted RBP11.47□□□□□ -0.57
ZEB1-213ENST00000558832 PTGDRQ13258 359 aa11.46□□□□□ -0.57
ZEB1-213ENST00000558832 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.57
ZEB1-213ENST00000558832 C6orf132Q5T0Z8 1188 aa11.45□□□□□ -0.58
ZEB1-213ENST00000558832 PPP4R3BQ5MIZ7 849 aa11.44□□□□□ -0.58
ZEB1-213ENST00000558832 MARVELD3Q96A59 401 aa11.44□□□□□ -0.58
ZEB1-213ENST00000558832 PSDA5PKW4 1024 aaPredicted RBP11.43□□□□□ -0.58
ZEB1-213ENST00000558832 POTEMA6NI47 508 aa11.43□□□□□ -0.58
ZEB1-213ENST00000558832 FCHSD2O94868 740 aa11.43□□□□□ -0.58
ZEB1-213ENST00000558832 FECHP22830 423 aa11.43□□□□□ -0.58
ZEB1-213ENST00000558832 TMEM132AQ24JP5 1023 aa11.43□□□□□ -0.58
ZEB1-213ENST00000558832 AK7Q96M32 723 aa11.42□□□□□ -0.58
ZEB1-213ENST00000558832 HIC1Q14526 733 aa11.41□□□□□ -0.58
ZEB1-213ENST00000558832 KRI1Q8N9T8 703 aaKnown RBP11.41□□□□□ -0.58
ZEB1-213ENST00000558832 BCL2L12Q9HB09 334 aa11.41□□□□□ -0.58
ZEB1-213ENST00000558832 GNPATO15228 680 aa11.4□□□□□ -0.58
ZEB1-213ENST00000558832 EMP3P54852 163 aa11.4□□□□□ -0.58
ZEB1-213ENST00000558832 NEUROD2Q15784 382 aa11.4□□□□□ -0.58
ZEB1-213ENST00000558832 ERBB3P21860 1342 aa11.39□□□□□ -0.59
ZEB1-213ENST00000558832 POTEB3A0JP26 581 aa11.39□□□□□ -0.59
ZEB1-213ENST00000558832 VARS2Q5ST30 1063 aaKnown RBP11.39□□□□□ -0.59
ZEB1-213ENST00000558832 POTEBQ6S5H4 581 aa11.39□□□□□ -0.59
ZEB1-213ENST00000558832 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
ZEB1-213ENST00000558832 COL9A1P20849 921 aa11.38□□□□□ -0.59
ZEB1-213ENST00000558832 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
ZEB1-213ENST00000558832 FAM205CA6NFA0 338 aa11.36□□□□□ -0.59
ZEB1-213ENST00000558832 POTEGQ6S5H5 508 aa11.35□□□□□ -0.59
ZEB1-213ENST00000558832 MAP2K5Q13163 448 aa11.34□□□□□ -0.59
ZEB1-213ENST00000558832 PTPREP23469 700 aa11.33□□□□□ -0.6
ZEB1-213ENST00000558832 MINK1Q8N4C8 1332 aaPredicted RBP11.33□□□□□ -0.6
ZEB1-213ENST00000558832 IRF6O14896 467 aa11.32□□□□□ -0.6
ZEB1-213ENST00000558832 TRIM66O15016 1216 aa11.32□□□□□ -0.6
ZEB1-213ENST00000558832 PADI6Q6TGC4 694 aa11.32□□□□□ -0.6
ZEB1-213ENST00000558832 TTC13Q8NBP0 860 aa11.32□□□□□ -0.6
ZEB1-213ENST00000558832 CERKQ8TCT0 537 aa11.32□□□□□ -0.6
ZEB1-213ENST00000558832 HS3ST6Q96QI5 342 aa11.32□□□□□ -0.6
ZEB1-213ENST00000558832 KCNK17Q96T54 332 aa11.32□□□□□ -0.6
ZEB1-213ENST00000558832 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
ZEB1-213ENST00000558832 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
ZEB1-213ENST00000558832 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
ZEB1-213ENST00000558832 PSEN2P49810 448 aa11.3□□□□□ -0.6
ZEB1-213ENST00000558832 PRSS12P56730 875 aa11.3□□□□□ -0.6
ZEB1-213ENST00000558832 ZNF687Q8N1G0 1237 aa11.29□□□□□ -0.6
ZEB1-213ENST00000558832 CDCA7LQ96GN5 454 aa11.29□□□□□ -0.6
ZEB1-213ENST00000558832 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
ZEB1-213ENST00000558832 GTF3C3Q9Y5Q9 886 aa11.29□□□□□ -0.6
ZEB1-213ENST00000558832 FAM161AQ3B820 660 aa11.28□□□□□ -0.6
ZEB1-213ENST00000558832 PDE4DQ08499 809 aa11.27□□□□□ -0.61
ZEB1-213ENST00000558832 DMRTA1Q5VZB9 504 aa11.27□□□□□ -0.61
ZEB1-213ENST00000558832 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
ZEB1-213ENST00000558832 TSKSQ9UJT2 592 aa11.27□□□□□ -0.61
ZEB1-213ENST00000558832 RB1CC1Q8TDY2 1594 aa11.26□□□□□ -0.61
ZEB1-213ENST00000558832 ARHGAP33O14559 1287 aa11.26□□□□□ -0.61
ZEB1-213ENST00000558832 PROX2Q3B8N5 592 aa11.26□□□□□ -0.61
ZEB1-213ENST00000558832 GPBP1L1Q9HC44 474 aaPredicted RBP11.26□□□□□ -0.61
ZEB1-213ENST00000558832 C3orf80F5H4A9 247 aa11.25□□□□□ -0.61
ZEB1-213ENST00000558832 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
ZEB1-213ENST00000558832 ADGRG1Q9Y653 693 aa11.25□□□□□ -0.61
ZEB1-213ENST00000558832 PHOX2BQ99453 314 aa11.24□□□□□ -0.61
ZEB1-213ENST00000558832 TRIM6-TRIM34B2RNG4 842 aa11.22□□□□□ -0.61
ZEB1-213ENST00000558832 PBX2P40425 430 aa11.22□□□□□ -0.61
ZEB1-213ENST00000558832 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
ZEB1-213ENST00000558832 AMHR2Q16671 573 aa11.19□□□□□ -0.62
ZEB1-213ENST00000558832 METTL3Q86U44 580 aaKnown RBP11.19□□□□□ -0.62
ZEB1-213ENST00000558832 PXYLP1Q8TE99 480 aa11.19□□□□□ -0.62
ZEB1-213ENST00000558832 KCNH8Q96L42 1107 aa11.19□□□□□ -0.62
ZEB1-213ENST00000558832 SLC4A5Q9BY07 1137 aa11.19□□□□□ -0.62
ZEB1-213ENST00000558832 ONECUT3O60422 494 aaPredicted RBP11.18□□□□□ -0.62
ZEB1-213ENST00000558832 NLRP7Q8WX94 980 aa11.17□□□□□ -0.62
ZEB1-213ENST00000558832 EYA1Q99502 592 aa11.17□□□□□ -0.62
ZEB1-213ENST00000558832 DAXXQ9UER7 740 aaPredicted RBP11.17□□□□□ -0.62
ZEB1-213ENST00000558832 NUDT18Q6ZVK8 323 aa11.16□□□□□ -0.62
ZEB1-213ENST00000558832 TATDN2Q93075 761 aa11.16□□□□□ -0.62
ZEB1-213ENST00000558832 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
ZEB1-213ENST00000558832 KIAA1468Q9P260 1216 aa11.16□□□□□ -0.62
ZEB1-213ENST00000558832 VPS9D1Q9Y2B5 631 aa11.16□□□□□ -0.62
ZEB1-213ENST00000558832 SMAPO00193 183 aa11.15□□□□□ -0.62
ZEB1-213ENST00000558832 OATP04181 439 aa11.15□□□□□ -0.62
ZEB1-213ENST00000558832 PARP9Q8IXQ6 854 aa11.15□□□□□ -0.62
ZEB1-213ENST00000558832 PACS2Q86VP3 889 aa11.14□□□□□ -0.63
ZEB1-213ENST00000558832 IL27Q8NEV9 243 aa11.14□□□□□ -0.63
ZEB1-213ENST00000558832 TMUB1Q9BVT8 246 aa11.14□□□□□ -0.63
ZEB1-213ENST00000558832 PNMA3Q9UL41 463 aa11.14□□□□□ -0.63
ZEB1-213ENST00000558832 LSM11P83369 360 aaKnown RBP eCLIP11.13□□□□□ -0.63
ZEB1-213ENST00000558832 RABGEF1Q9UJ41 708 aa11.13□□□□□ -0.63
ZEB1-213ENST00000558832 NBPF26B4DH59 902 aa11.12□□□□□ -0.63
ZEB1-213ENST00000558832 RBM46Q8TBY0 533 aaKnown RBP11.12□□□□□ -0.63
ZEB1-213ENST00000558832 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
ZEB1-213ENST00000558832 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
ZEB1-213ENST00000558832 NACADO15069 1562 aa11.11□□□□□ -0.63
ZEB1-213ENST00000558832 MDM2Q00987 491 aaPredicted RBP11.11□□□□□ -0.63
ZEB1-213ENST00000558832 RCCD1A6NED2 376 aa11.1□□□□□ -0.63
ZEB1-213ENST00000558832 BHMG1C9JSJ3 638 aaPredicted RBP11.1□□□□□ -0.63
ZEB1-213ENST00000558832 TK2O00142 265 aa11.1□□□□□ -0.63
ZEB1-213ENST00000558832 FAM117AQ9C073 453 aa11.1□□□□□ -0.63
ZEB1-213ENST00000558832 TIMELESSQ9UNS1 1208 aa11.1□□□□□ -0.63
ZEB1-213ENST00000558832 SEPT9Q9UHD8 586 aaPredicted RBP11.09□□□□□ -0.63
ZEB1-213ENST00000558832 TTLL12Q14166 644 aaPredicted RBP11.08□□□□□ -0.64
ZEB1-213ENST00000558832 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
ZEB1-213ENST00000558832 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms